| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,833,416 | C→G | 5.1% | P228P (CCG→CCC) | PP_4246 ← | substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,833,416 | 0 | C | G | 5.1% | 284.0 / 3.8 | 90 | P228P (CCG→CCC) | PP_4246 | substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (39/46); new base G (2/3); total (41/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCA > NC_002947/4833267‑4833564 | cacTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGccccc > 1:1829576/1‑150 (MQ=255) acTGCAGGGAACGTTGCCGAAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCg < 2:2093189/150‑1 (MQ=255) gCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGgc < 1:2025544/150‑1 (MQ=255) gCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGgc < 1:1631064/150‑1 (MQ=255) aGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGgcgc > 1:1989593/1‑150 (MQ=255) aCGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCGGGGgcgcctatc < 1:36529/150‑6 (MQ=255) ccGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTa < 2:2318354/150‑1 (MQ=255) aaCAGGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGGACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAgtgg < 2:838860/150‑1 (MQ=255) acacGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCGGGGgcgcctat > 1:317758/1‑134 (MQ=255) acacGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCGGGGgcgcctat < 2:317758/138‑5 (MQ=255) acacGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAgtggt < 2:229490/150‑1 (MQ=255) acGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGCTAGGCGCCCCCGGGCgcag < 2:700813/134‑1 (MQ=255) acGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCgcag > 1:700813/1‑134 (MQ=255) acGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGa < 1:1384700/150‑1 (MQ=255) aaTTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGAc < 1:485721/150‑1 (MQ=255) aaTTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGAGATGGCGCAGGCCACGCGGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGAc < 1:1971136/150‑1 (MQ=255) tttAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCt < 2:779995/150‑1 (MQ=255) tttAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGCAGTGGTGATAGAccg > 1:1573255/1‑149 (MQ=255) ttAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAgtg < 1:685715/138‑1 (MQ=255) ttAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAgtg > 2:685715/1‑138 (MQ=255) aGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGt < 2:2372050/150‑1 (MQ=255) aGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGAAGAGGAGGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGt < 2:790647/150‑1 (MQ=255) tCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGCTGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCa > 1:215091/1‑150 (MQ=255) cTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCaa < 1:437793/150‑1 (MQ=255) cTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCaa < 2:1896359/150‑1 (MQ=255) ttGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGCGCGCAGCAAGGCGTCGTGGTGATAGACCTGGTCAAt > 2:14545/1‑150 (MQ=255) tGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCGCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATg > 1:828929/1‑150 (MQ=255) gCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGc < 2:837012/150‑1 (MQ=255) gTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGtt < 1:990433/150‑1 (MQ=255) tGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTtg < 1:361245/150‑1 (MQ=255) gCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTtgt > 1:1196543/1‑150 (MQ=255) aGCNACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGa > 2:1499863/1‑150 (MQ=255) gCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGaa > 1:1599916/1‑150 (MQ=255) ccACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGc < 1:2109428/115‑1 (MQ=255) ccACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGc > 2:2109428/1‑115 (MQ=255) cACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAgg < 2:1196543/150‑1 (MQ=255) aCTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGc < 1:1867276/150‑1 (MQ=255) aCTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGc > 1:804101/1‑150 (MQ=255) aCTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGc > 2:755858/1‑150 (MQ=255) tttGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCAc < 2:1989593/150‑1 (MQ=255) aTTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGc > 1:2419495/1‑150 (MQ=255) tCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTc > 1:2042775/1‑150 (MQ=255) tCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTc > 1:1200369/1‑150 (MQ=255) gAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGc > 1:1546562/1‑150 (MQ=255) tGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGt < 1:1499863/150‑1 (MQ=255) tGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGt < 1:755858/150‑1 (MQ=255) gcgcgcCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCggg < 1:94032/148‑1 (MQ=255) gcgcgcCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCggg > 2:94032/1‑148 (MQ=255) gcgcCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATg < 1:96698/110‑1 (MQ=255) gcgcCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATg > 2:96698/1‑110 (MQ=255) gcgcCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGc > 2:2047959/1‑150 (MQ=255) gcCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGt < 1:1600286/150‑1 (MQ=255) gcCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGt > 1:318750/1‑150 (MQ=255) gcCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGt > 2:630123/1‑150 (MQ=255) cAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGc > 1:108082/1‑150 (MQ=255) gTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCa > 2:979388/1‑150 (MQ=255) gTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTCGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCa < 2:1599916/150‑1 (MQ=255) gTTCACCGCTGTCACGCAGGCCACGCAGCAGAGCAGGGAACGACTGATCCACGATAGGCTCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCGCGCCGGGTTGCGTGCCa > 1:366909/1‑150 (MQ=255) ttCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGAcc > 1:127830/1‑94 (MQ=255) ttCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGAcc < 2:127830/94‑1 (MQ=255) aCCGCTGTCACGCAGGCGACGCAGCAGGGCAGCGAACGAAGGCCCGCCGATAGGCGCCCCCGGGCGCAGCAAGTCGTAGTGGTGATAGACCTGGTCAAGGCGTTCTGAAGCCCCCAGCTGCGACCTTCACGCCGGGCTGCGTGCCAggga > 2:940513/1‑148 (MQ=255) aCCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGaa > 2:912238/1‑150 (MQ=255) gTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGGTCGCCGGGTTGCGTGCCAGGAAATCGCt < 1:1510877/150‑1 (MQ=255) cACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATCGGAGTGCGGAACCCCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGa < 2:1243204/150‑1 (MQ=255) cACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGa < 2:2098246/150‑1 (MQ=255) gCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAggc > 2:50475/1‑149 (MQ=255) cggCCCCGCAGCAGGGCTGTGTCCGACTATTGGTAGATAGGCGTCCCCGTGCGCAGCAAGCGGTAGTGCTGATTGACCTGGTGAATGCGTTGCGAACGAGCCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAg < 2:1078026/149‑1 (MQ=255) aGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAg < 2:804101/150‑1 (MQ=255) cGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAAcgc < 2:318750/150‑1 (MQ=255) gggCAGCGAACGACTGCTCGCCGATAGGCGCGCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCa > 1:2029825/1‑150 (MQ=255) gCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGTCCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAgg > 1:2151873/1‑150 (MQ=255) cggCGAACGACTGCTCGCCGACAGGCGCCCCCGGGCGCAGCAAGGCGGAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCGCTAGCGGCGCCCAGGTCGCCGGGTGGCGTGCCCGGCAATCGCCGCGGTAGGAACGCCTGACCAggg < 2:988224/148‑1 (MQ=255) aaCGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAata > 2:1423376/1‑150 (MQ=255) aCGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTc > 2:1643111/1‑61 (MQ=255) aCGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTc < 1:1643111/61‑1 (MQ=255) gACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGt > 1:1329931/1‑66 (MQ=255) gACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGt < 2:1329931/66‑1 (MQ=255) gACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCg < 2:1829576/150‑1 (MQ=255) cTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGgc < 1:1809151/150‑1 (MQ=255) gCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGcggcc > 2:2364177/1‑150 (MQ=255) cttgctgcgcCCGGGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCCGCGcagccgg > 2:961532/7‑150 (MQ=255) gATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGcggccggc > 2:1548157/1‑150 (MQ=255) aTAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGCAGGAACGCGTGACCAGGGCAATATCGGCGCggccggcc > 1:461388/1‑150 (MQ=255) aGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTg < 1:1423376/150‑1 (MQ=255) ggCGCGCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGc < 2:2029825/150‑1 (MQ=255) ggCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGc < 2:1983890/150‑1 (MQ=255) gcgcCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATc < 1:968424/133‑1 (MQ=255) gcgcCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATc > 2:968424/1‑133 (MQ=255) gcgcCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCa < 2:837627/150‑1 (MQ=255) gcCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAatat < 1:2187461/130‑1 (MQ=255) gcCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAatat > 2:2187461/1‑130 (MQ=255) ccGGGCGCCGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATca < 2:1573255/150‑1 (MQ=255) ccGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATca > 1:806093/1‑150 (MQ=255) | CACTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCA > NC_002947/4833267‑4833564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |