| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,841,159 | T→A | 5.5% | L13Q (CTG→CAG) | ccoO‑II → | cbb3‑type cytochrome c oxidase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,841,159 | 0 | T | A | 5.5% | 284.2 / 5.6 | 91 | L13Q (CTG→CAG) | ccoO‑II | cbb3‑type cytochrome c oxidase subunit |
| Reads supporting (aligned to +/- strand): ref base T (42/44); new base A (2/3); total (44/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
TTCGCCAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGATATCTACATCCGCG > NC_002947/4841012‑4841305 | ttcGCCAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTgg > 1:771620/1‑150 (MQ=255) cGCCAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGcc < 1:488386/150‑1 (MQ=255) ccAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCctt > 1:946430/1‑150 (MQ=255) ccAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAACACGTCGAGAAGAACATAGGCCTGCTGGCctt > 2:979505/1‑150 (MQ=255) cAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCcttc < 2:771620/150‑1 (MQ=255) cAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCcttc < 2:2034650/150‑1 (MQ=255) ggCATGCTGCTGATGGCCTACAAAGTCTTCCGAACAGTACGTCGCACTTACCGCTCACAGTCTTAAGAGTCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCAGCAGGCctatgttc < 2:1105011/150‑7 (MQ=255) gCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCAGCAGGCctatg < 1:232410/146‑4 (MQ=255) gCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCAGCAGGCctatg > 2:232410/1‑143 (MQ=255) gCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCAGCAGGCctat > 1:2168479/1‑143 (MQ=255) gCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCAGCAGGCctat < 2:2168479/145‑3 (MQ=255) aTGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATgg < 2:798000/150‑1 (MQ=255) tgctgcTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATg > 1:682034/1‑148 (MQ=255) tgctgcTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATg < 2:682034/148‑1 (MQ=255) gctgctGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTc < 2:1712839/150‑1 (MQ=255) tgctgATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCAt < 2:2283867/150‑1 (MQ=255) tgctgATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTAGTGGGAGCGCAATGATGAAGCATGAAGCCTTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCAt < 1:1993099/150‑1 (MQ=255) aTGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCg < 2:1396791/150‑1 (MQ=255) gCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGa < 2:972388/150‑1 (MQ=255) gCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGa < 2:1848283/150‑1 (MQ=255) cTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGc > 1:1033906/1‑150 (MQ=255) cTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGc > 2:1365363/1‑150 (MQ=255) aCGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCgg < 1:2021037/150‑1 (MQ=255) tCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGGCATCGCCGTGAGCGTCGGTGGCCt < 1:65129/150‑1 (MQ=255) cgtaccgtacGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCttcttc > 2:226056/1‑119 (MQ=255) cgtaccgtacGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCttcttc < 1:226056/119‑1 (MQ=255) cgtacGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCg < 2:574422/133‑1 (MQ=255) cgtacGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCg > 1:574422/1‑133 (MQ=255) cgtacGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCa > 2:330018/1‑149 (MQ=255) cgtacGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCa < 1:330018/149‑1 (MQ=255) gtacGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGa < 2:923881/150‑1 (MQ=255) tacGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCGGTGTGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGAt > 1:623683/1‑150 (MQ=255) ccgccAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTccc < 2:812548/150‑1 (MQ=255) cgccAACCCGGCACAGGCTGAAGACGCCGCCAAGATCGTCGTTGTGGGAGCGCACTAATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCg > 1:1066216/1‑150 (MQ=255) gccAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGa < 2:794193/135‑1 (MQ=255) gccAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGa > 1:794193/1‑135 (MQ=255) ccAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCt < 1:1522870/150‑1 (MQ=255) cAACCCGGCACAGGCTGAAGAGGCCGCCAAGAGCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTg < 1:2088026/150‑1 (MQ=255) aaCCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGt < 1:150240/150‑1 (MQ=255) ccGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATg > 1:1741221/1‑101 (MQ=255) ccGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATg < 2:1741221/101‑1 (MQ=255) ccGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGtttt > 2:1479693/1‑150 (MQ=255) ccGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGtttt > 1:2202758/1‑150 (MQ=255) cGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGt > 2:2167584/1‑121 (MQ=255) cGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGt < 1:2167584/121‑1 (MQ=255) cGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGttttt < 2:478284/150‑1 (MQ=255) acaGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAg > 2:338304/1‑150 (MQ=255) cTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGt > 1:1589500/1‑150 (MQ=255) gccgccAAGATCGTCGTTGTGGGGGCGCACTGATGCGTCATGCAGCCGTCGAGAAGAACATAGGCCTTCTGGCGTTCTTCATGGCCATTGCCGTGAGCGTCGGTGTCCTGACACAGATCGTCCGGCTGTTTTTCCAGGAGGGCACcaaca > 2:201550/1‑150 (MQ=255) gccgccAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACcaaca > 1:2141928/1‑150 (MQ=255) gccgccAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACcaaca > 2:1493464/1‑150 (MQ=255) gccAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGc < 1:338304/150‑1 (MQ=255) gccAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGT‑ATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTcc < 1:1926384/119‑1 (MQ=255) gccAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGT‑ATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTcc > 2:1926384/1‑119 (MQ=255) cAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTTGTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCg < 1:2250773/150‑1 (MQ=255) cAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCa > 1:1709235/1‑110 (MQ=255) cAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCa < 2:1709235/110‑1 (MQ=255) cAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCg < 2:946430/150‑1 (MQ=255) gtcgtTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCcttctt < 2:701659/67‑1 (MQ=255) gtcgtTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCcttctt > 1:701659/1‑67 (MQ=255) gtcgtTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAgg < 1:2059979/150‑1 (MQ=255) gtcgtTGTGGGAGCGCACTGATGAAGCATGAAGCCGGCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAgg < 2:787711/150‑1 (MQ=255) gtTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGGTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCa < 2:130733/150‑1 (MQ=255) ttGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCAt > 1:957451/1‑150 (MQ=255) gggAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAg > 1:1851892/1‑150 (MQ=255) aCTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATc > 1:2271487/1‑61 (MQ=255) aCTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATc < 2:2271487/61‑1 (MQ=255) gaagcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCt > 1:140650/1‑150 (MQ=255) gaagcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGAATTATTATTTCCCGCTGTTTTTCCAGGACGTCACCAACAACCCGGTCGAGGGCATGAAGCCGCCCACCGCGCt > 1:148299/1‑150 (MQ=255) agcatgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTgg > 2:1038310/1‑150 (MQ=255) catgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAg < 1:537589/150‑1 (MQ=255) atgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGc < 1:1465954/68‑1 (MQ=255) atgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGc > 2:1465954/1‑68 (MQ=255) atgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACcaacaa > 2:1630897/1‑112 (MQ=255) atgaagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACcaacaa < 1:1630897/112‑1 (MQ=255) aagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAggg > 2:911905/1‑121 (MQ=255) aagcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAggg < 1:911905/121‑1 (MQ=255) agcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGa > 1:28553/1‑150 (MQ=255) agcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGa > 1:785024/1‑150 (MQ=255) gcCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGaa < 1:782058/150‑1 (MQ=255) gagaAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCcgc > 1:559115/1‑150 (MQ=255) agaagaACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCcgcg > 1:2002641/1‑150 (MQ=255) aagaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGcc < 1:1250363/119‑1 (MQ=255) aagaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGat > 1:480569/1‑150 (MQ=255) aagaaCATAGGCCTGCTGGCCTTCTTCAGGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGcc > 2:1250363/1‑119 (MQ=255) gaaCATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGatat < 2:2141928/150‑1 (MQ=255) gaaCATAGGCCTGCTGGCCTTCCTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGt < 1:2294072/135‑1 (MQ=255) gaaCATAGGCCTGCTGGCCTTCCTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGt > 2:2294072/1‑135 (MQ=255) aTAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAg > 1:2026283/1‑78 (MQ=255) aTAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAg < 2:2026283/78‑1 (MQ=255) gCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCAAGATCGTCCCGCAGTTTTTCGAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCAATATCTACATcc > 2:1329517/1‑150 (MQ=255) ctgctgGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGATATCTACATCcgc < 1:1493464/150‑1 (MQ=255) tgctgGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGATATCTACATCcgcg > 1:89115/1‑150 (MQ=255) | TTCGCCAGCGGCATGCTGCTGATGGCCTACAACGTGTTCCGTACCGTACGTGCCGCCAACCCGGCACAGGCTGAAGAGGCCGCCAAGATCGTCGTTGTGGGAGCGCACTGATGAAGCATGAAGCCGTCGAGAAGAACATAGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGCGTCGGTGGCCTGACCCAGATCGTCCCGCTGTTTTTCCAGGACGTCACCAACAAGCCGGTCGAGGGCATGAAGCCGCGCACCGCGCTGGAGGTGGAAGGCCGCGATATCTACATCCGCG > NC_002947/4841012‑4841305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |