Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,914,274 | G→T | 7.2% | P157Q (CCG→CAG) | ccmF ← | holocytochrome c synthetase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,914,274 | 0 | G | T | 7.2% | 305.5 / 7.1 | 97 | P157Q (CCG→CAG) | ccmF | holocytochrome c synthetase |
Reads supporting (aligned to +/- strand): ref base G (38/52); new base T (3/4); total (41/56) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 |
CGTCCAGCCGGCCGCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAGGTCCAGCCGCC > NC_002947/4914125‑4914419 | cGTCCAGCCGGCCGCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCg < 2:2190280/150‑1 (MQ=255) aGCCGCCCGCCGAGCAAGGCGGAAATAGAGACCACGAAAGGCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGGGAACGATCAGGCCAAAGTCCTGAAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGgcagc < 2:981314/150‑1 (MQ=255) ccggccgCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGcagcag < 1:1815053/150‑1 (MQ=255) ccggccgCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGcagcag < 1:1539737/150‑1 (MQ=255) ggccgCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGgc > 1:937396/1‑150 (MQ=255) ccgccgAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCTGCCGCAGgt‑gc < 1:661284/150‑1 (MQ=255) ccgccgAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCTGCCGCAGgt‑gc < 1:1681504/150‑1 (MQ=255) cgccgAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCt > 1:2448599/1‑150 (MQ=255) gccgAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGGAGAGCATGGGCAGGTGAAGGATCAGGCCAAAGTCCTGCAACAGAGGGTTGAGGTCACGGCCATCGGTCGGCACGTGCGgcaacacgggccg > 2:1113327/1‑143 (MQ=255) ccgAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCAGCGCCTGCTGCCGCAggtgccga < 2:388917/150‑7 (MQ=255) gAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGaa < 1:432718/150‑1 (MQ=255) aGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAAc < 1:825515/150‑1 (MQ=255) cAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACgg < 2:1609114/150‑1 (MQ=255) gcAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGaa < 1:369907/150‑1 (MQ=255) gcAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGaa < 1:1489805/150‑1 (MQ=255) aTGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTa > 1:1318661/1‑150 (MQ=255) tGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTaa < 1:1622809/150‑1 (MQ=255) tGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTaa < 1:1813627/150‑1 (MQ=255) tGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTaa < 1:916018/150‑1 (MQ=255) gCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATg < 1:1155106/150‑1 (MQ=255) gAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGAt > 1:1606591/1‑150 (MQ=255) aCGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGAtca < 1:272685/150‑1 (MQ=255) aaGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGtt < 2:221452/130‑1 (MQ=255) aaGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGtt > 1:221452/1‑130 (MQ=255) cACCGAGAAGCCCACATAGCGCATGTAGAGCATGGGCGGATGAACGATACGGCGGAAGTCCTGCAACAGCGGGGTGAGGTAACGGCCATCGGTCGGCACCTACGGCAGCAGGC‑GCTGGAACGGGTGGGAAGTAATGAtcaggacgctcag > 2:334409/1‑150 (MQ=255) cACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGtt < 1:403455/126‑1 (MQ=255) cACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGtt > 2:403455/1‑126 (MQ=255) cACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAAt < 2:2331352/135‑1 (MQ=255) cACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAAt > 1:2331352/1‑135 (MQ=255) cACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGAtcaggaagctcag > 2:1648330/1‑150 (MQ=255) cGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATGGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGAtcaggaagctcaggaa > 2:1213625/1‑150 (MQ=255) gagaAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGAtcaggaagctcaggaag < 2:214770/150‑1 (MQ=255) gCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCCCACCACGGGCGATGTTGTA‑CATGCGGCCGTAACGGGTTGGAAGTAATGATCAGGAAGCTCAGTAAGCCCAc > 1:876461/1‑150 (MQ=255) gCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCGGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCAc > 2:546758/1‑150 (MQ=255) cccACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAAc < 1:2211837/111‑1 (MQ=255) cccACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAAc > 2:2211837/1‑111 (MQ=255) ccATATAGCCGATGTAGAGCATGGGTGGGTGAACGACCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGc > 2:1008769/1‑150 (MQ=255) ccACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCGCAGGAGGCCCACGc > 1:1696490/1‑150 (MQ=255) cacaTAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGTAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCt > 2:1863903/1‑150 (MQ=255) caTAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCGCAGGAAGCCCACGCTGa < 2:937396/150‑1 (MQ=255) aTAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGAt > 2:1721356/1‑150 (MQ=255) aTAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGAt < 1:932694/150‑1 (MQ=255) aGCCCATGTACAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGAtcagga < 2:1805745/126‑1 (MQ=255) aGCCCATGTACAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGAtcagga > 1:1805745/1‑126 (MQ=255) gCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCAt > 1:2303533/1‑150 (MQ=255) gCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCAt < 1:1213625/150‑1 (MQ=255) ccATGTAGAGCATGGGTGGGTGACCGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGc < 1:1113327/150‑1 (MQ=255) ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCTGCCGCAggtgcc > 2:1318072/1‑92 (MQ=255) ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCTGCCGCAGgt‑gcc < 1:1318072/96‑2 (MQ=255) ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGc > 1:2070071/1‑150 (MQ=255) ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGc < 1:1721356/150‑1 (MQ=255) ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGc > 2:468665/1‑150 (MQ=255) ccATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGc < 1:334409/150‑1 (MQ=255) cATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGcc < 1:2106166/150‑1 (MQ=255) cATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGcc < 2:1375666/150‑1 (MQ=255) ctacATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTAc < 1:712862/147‑1 (MQ=255) tgggtgggTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCa < 2:1870754/150‑1 (MQ=255) tgggtgggTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCa < 1:1653941/150‑1 (MQ=255) gtgggtgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCa > 2:65687/1‑150 (MQ=255) gggtgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACggg < 1:1470862/87‑1 (MQ=255) gggtgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACggg > 2:1470862/1‑87 (MQ=255) ggtgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCAcgc < 2:2303533/150‑1 (MQ=255) tgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACgg < 1:188510/83‑1 (MQ=255) tgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACgg > 2:188510/1‑83 (MQ=255) tgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCgg < 1:978926/150‑1 (MQ=255) tgAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCgg < 1:1285683/150‑1 (MQ=255) gATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAg < 2:2070071/150‑1 (MQ=255) gCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGtt > 1:242366/1‑75 (MQ=255) gCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGtt < 2:242366/75‑1 (MQ=255) gCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCAc > 1:1385043/1‑150 (MQ=255) aaGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGc < 2:593750/150‑1 (MQ=255) gTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGAGCCAGCATCACCTGCgg > 1:739590/1‑150 (MQ=255) cTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCGGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCaa < 1:546758/150‑1 (MQ=255) cTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCaa < 2:421425/150‑1 (MQ=255) tGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAAc > 2:1674135/1‑150 (MQ=255) gCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACt < 1:1674135/150‑1 (MQ=255) aCAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGcc > 2:2274410/1‑150 (MQ=255) cAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCg > 2:1089296/1‑150 (MQ=255) aGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGAAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCgg < 1:1008769/150‑1 (MQ=255) cGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGga < 2:2448599/150‑1 (MQ=255) ggTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGga > 2:432517/1‑142 (MQ=255) ggTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGga < 1:432517/142‑1 (MQ=255) cGGCCATCGGTCGGAACCTGCGGCCGACGGA‑TCGCCATCGGCGTGGAAGCAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACg < 2:1841272/150‑1 (MQ=255) ggCNATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACgg > 2:1515067/1‑150 (MQ=255) ccATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGTAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACATGCGGCAACTGCACAGAGAACACCGACACGGCa > 1:1307064/1‑150 (MQ=255) aTCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTaa < 1:1790560/47‑1 (MQ=255) aTCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTaa > 2:1790560/1‑47 (MQ=255) tcggtcggCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACg > 2:217485/1‑144 (MQ=255) tcggtcggCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACg < 1:217485/144‑1 (MQ=255) tcggtcggCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAg < 1:468665/150‑1 (MQ=255) tcggtcggCACCTGCGGCAGCAGGC‑GCGGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAg < 1:679298/150‑1 (MQ=255) cggtcggCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAgg < 1:1648330/150‑1 (MQ=255) cagcgccTGCTGCCGCAGGT‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAGGTCCa > 1:54848/6‑150 (MQ=255) aCCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCgg < 1:2313490/120‑1 (MQ=255) aCCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCgg > 2:2313490/1‑120 (MQ=255) cTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGacac > 2:759209/1‑132 (MQ=255) cTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGacac < 1:759209/132‑1 (MQ=255) cTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAGGTCCAgccgcc > 1:1786359/1‑150 (MQ=255) | CGTCCAGCCGGCCGCCGAGCAAGGCGGCAATGGCGAACGCGAAAGCCACCGAGAAGCCCACATAGCCCATGTAGAGCATGGGTGGGTGAACGATCAGGCCAAAGTCCTGCAACAGCGGGTTGAGGTCACGGCCATCGGTCGGCACCTGCGGCAGCAGGC‑GCTGGAACGGGTTGGAAGTAATGATCAGGAAGCTCAGGAAGCCCACGCTGATCATGCCCATTACCGCCAGCACGCGGGCCAGCATCACCTGCGGCAACTGCCGGGAGAACACCGACACGGCAAAGGTCCAGCCGCC > NC_002947/4914125‑4914419 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |