| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,917,404 | A→T | 5.3% | F25I (TTC→ATC) | ccmA ← | cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,917,404 | 0 | A | T | 5.3% | 295.0 / 5.6 | 94 | F25I (TTC→ATC) | ccmA | cytochrome c biogenesis ABC transporter ATP‑binding protein CcmA |
| Reads supporting (aligned to +/- strand): ref base A (44/45); new base T (3/2); total (47/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01 | |||||||||||
GCATGACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGTCGCCCCGC > NC_002947/4917256‑4917552 | gCATGACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGaaa < 2:1027492/150‑1 (MQ=255)gCATGACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGaaa < 2:382863/150‑1 (MQ=255) gACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGa < 1:2426040/150‑1 (MQ=255) aCGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAg > 1:1258221/1‑150 (MQ=255) cTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTg > 1:600572/1‑150 (MQ=255) tGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGt > 1:1514287/1‑150 (MQ=255) gTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGtt > 1:471336/1‑150 (MQ=255) gTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGtt < 2:600572/150‑1 (MQ=255) ttCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTc < 1:1849992/150‑1 (MQ=255) tGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGATTTCGAGCTgg > 1:431519/1‑144 (MQ=255) tGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGATTTCGAGCTgg < 2:431519/145‑2 (MQ=255) tGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGaa < 1:340775/150‑1 (MQ=255) tGCCAGGGGCTTGCCACCCAGCAGAATCTGACCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTTGaa > 2:280054/1‑150 (MQ=255) cAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGaa < 1:1388485/147‑1 (MQ=255) cAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGaa > 2:1388485/1‑147 (MQ=255) cAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAAccg > 1:2062828/1‑148 (MQ=255) cAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTCGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAAcag > 2:1777719/1‑150 (MQ=255) aGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAAcagc > 2:487597/1‑150 (MQ=255) ggggCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAAcagca < 1:1275041/150‑1 (MQ=255) ggCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAgg < 2:471336/150‑1 (MQ=255) gCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGgc > 2:2399335/1‑150 (MQ=255) cACCCAGCAGAATCTGCCCGGCCGTAGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGt > 2:1436433/1‑150 (MQ=255) gAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGc > 1:681596/1‑150 (MQ=255) aaTCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGca > 1:1711847/1‑150 (MQ=255) cTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGcaggc < 1:2178500/150‑1 (MQ=255) gTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTCGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCcgcg < 1:1777719/150‑1 (MQ=255) tCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCgg > 2:853648/1‑150 (MQ=255) tCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCgg > 2:2113532/1‑150 (MQ=255) ggCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCt > 2:1810008/1‑150 (MQ=255) ggCTGCATCACCCCGGACAGAAGGCGCAACAGGCTGGTGTAGCCGCGGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCt > 2:25272/1‑150 (MQ=255) gCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCtt < 1:2399335/150‑1 (MQ=255) gCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCtt < 1:2295145/150‑1 (MQ=255) gCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCtt > 1:2197168/1‑150 (MQ=255) cTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTg < 1:1318001/150‑1 (MQ=255) cTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTg > 1:2174524/1‑150 (MQ=255) gCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTgta < 2:493097/150‑3 (MQ=255) cATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAg < 2:1711847/150‑1 (MQ=255) cATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAg < 2:1437122/150‑1 (MQ=255) cATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAg < 1:1953908/150‑1 (MQ=255) cATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAg < 2:1160689/150‑1 (MQ=255) tCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGt > 2:828903/1‑150 (MQ=255) cAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTg > 2:1352350/1‑150 (MQ=255) aGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCaggccaagccgcgggc > 1:573385/1‑134 (MQ=255) aGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCaggccaagccgcgggc < 2:573385/140‑7 (MQ=255) gCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGCAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGTCTCGGAGGTGaa > 2:1131925/1‑150 (MQ=255) gCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGaa > 2:1875165/1‑150 (MQ=255) gCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTAGAGGAGaa > 2:1362364/1‑150 (MQ=255) cccGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAg > 1:878711/1‑150 (MQ=255) cagcagGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCAc < 2:1932205/150‑1 (MQ=255) cagGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGt < 1:838739/150‑1 (MQ=255) tcAACAGTCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGTCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGc < 1:1077910/149‑1 (MQ=255) gcAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGc > 1:1193366/1‑150 (MQ=255) gcAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTNCGc < 2:1514287/150‑1 (MQ=255) cAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGcc > 1:1423287/1‑150 (MQ=255) aaCAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCt > 1:49752/1‑150 (MQ=255) aGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTAt > 2:2334278/1‑150 (MQ=255) gCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGcaggccaggc > 1:1689685/1‑110 (MQ=255) gCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGcaggccaggc < 2:1689685/110‑1 (MQ=255) cTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAgg > 2:596284/1‑129 (MQ=255) cTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAgg < 1:596284/129‑1 (MQ=255) gTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAg < 2:1168911/150‑1 (MQ=255) gTCTTGCCGCTGCCGTTGGGGCCACTGAGCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGACGGGTCACGGTTTCGCCTTATCTTCAg < 1:2113532/150‑1 (MQ=255) tCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGt > 1:989267/1‑150 (MQ=255) tCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGt > 2:2192486/1‑150 (MQ=255) cTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTa < 1:853648/150‑1 (MQ=255) cTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAACTCACAACCGAGCTGTTTCATCAGCTGCCGCGATTCGCGCTTTGTGGCCAGGCCGTCTGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTa < 2:269324/150‑1 (MQ=255) tGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGcag < 2:1234695/95‑1 (MQ=255) tGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGcag > 1:1234695/1‑95 (MQ=255) ccGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGc > 1:1256960/1‑150 (MQ=255) cGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCt < 1:1352350/150‑1 (MQ=255) tGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGGTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTg > 2:1288064/1‑150 (MQ=255) ccGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGaa < 2:1423287/150‑1 (MQ=255) ccGTTGGGGCCACTGATATGACGCCTGTTGACGGCGCAGAGCGCGGTAGCGGTCTGTTCGAACAGCATGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGaa < 2:1842238/150‑1 (MQ=255) gTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAagc > 2:1583198/1‑150 (MQ=255) ggggCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAagcagc < 2:265/150‑1 (MQ=255) cACTGATCTGCCGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGTACAGCAGGCGCGAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTCGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAaca < 2:1256938/150‑1 (MQ=255) aCTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAacac > 2:668998/1‑150 (MQ=255) aCTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAacac > 2:975423/1‑150 (MQ=255) aCTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAacac > 1:742973/1‑150 (MQ=255) aCTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAacac < 2:466692/150‑1 (MQ=255) gATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGc < 1:25272/150‑1 (MQ=255) aTCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCt < 1:828903/150‑1 (MQ=255) tCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTc < 1:975423/150‑1 (MQ=255) tGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCa > 1:211839/1‑150 (MQ=255) agtaTGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGaa < 1:992158/147‑1 (MQ=255) caTGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAAcc < 2:681596/150‑1 (MQ=255) caTGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGATCGCAGGCCAGGCCCGAGGCTACGGCTTGTAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGCAGTAGCCCACACCGCTCCAGAAcc > 1:1971360/1‑150 (MQ=255) gTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCtt < 1:1875165/150‑1 (MQ=255) ccGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTgtgt < 2:878711/150‑1 (MQ=255) gcgcCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGtctc > 2:2108433/1‑150 (MQ=255) gcgcCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGtctc < 1:487597/150‑1 (MQ=255) gcCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCaa < 1:1810008/150‑1 (MQ=255) gcCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCaa < 2:1193366/150‑1 (MQ=255) gcCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCaa < 2:989267/150‑1 (MQ=255) gaacAGCTCGATTTCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCaa > 1:1644328/4‑150 (MQ=255) aacAGCTCGATTTCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAg > 2:165695/3‑150 (MQ=255) aaaTCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGTCGCCCcgc < 1:2192486/150‑1 (MQ=255) | GCATGACGCTGTTCTGCCAGGGGCTTGCCACCCAGCAGAATCTGCCCGGCCGTCGGCTGCATCAGCCCGGCCAGCAGGCGCAACAGGCTGGTCTTGCCGCTGCCGTTGGGGCCACTGATCTGCAGCATGTCGCCGGCGCCCAGCTCGAAATCGAGCTGTTCGAACAGCAGGCGCCAGTCGCGCTCGCAGGCCAGGCCCGCGGCTTGGAGGTGAAGGGTCACGGTTTCGCCTTATCTTCAGTAGGGCTTTGAAGCAGCCAACACCGCTCCAGAACCCTTGTGTCTCAAGTCGCCCCGC > NC_002947/4917256‑4917552 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |