| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,112,690 | T→A | 6.9% | intergenic (‑231/+35) | rluB ← / ← PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,112,690 | 0 | T | A | 6.9% | 245.3 / 7.1 | 82 | intergenic (‑231/+35) | rluB/PP_4497 | 23S rRNA pseudouridylate synthase B/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (44/32); new base A (3/3); total (47/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.14e-01 | |||||||||||
CAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCT > NC_002947/5112541‑5112838 | caGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCtt < 2:2260014/150‑1 (MQ=255) aGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTg > 2:395993/1‑150 (MQ=255) ggggAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGc < 1:773234/150‑1 (MQ=255) ggAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGccc < 2:2211986/150‑1 (MQ=255) gAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGATCGCACAACATTCGTAGCCTTGTAAT‑CCCCGTCAGGAGCGGGCTTGcccc > 1:1738034/1‑149 (MQ=255) aaCGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCcgc < 1:807486/150‑1 (MQ=255) cGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCAAGCCcgctc < 1:57228/150‑3 (MQ=255) cACTGGAGGGTAGAGGGTGTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCGCTTCGGGGGCACGCCCGCGCCTACATGTTCGGGCAACCGTCGGGGCC‑TGGGGTACCACTGTGGGAGCGGCCTTGCCCGCGacg > 2:670185/1‑148 (MQ=255) aCTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAaga < 1:938707/150‑1 (MQ=255) tGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGTACGCCCGCTCCTACATGTCCTCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAgg < 1:1485483/150‑1 (MQ=255) ggAGGGTAGAGGGTTTTGTGGGGCTGGGCATTATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGc < 1:395993/150‑1 (MQ=255) ggAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGc < 2:466703/150‑1 (MQ=255) ggggTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAgg < 2:878178/149‑1 (MQ=255) agGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCAAGCCcgctc > 2:885761/1‑133 (MQ=255) agGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCAAGCCcgctc < 1:885761/135‑3 (MQ=255) ggCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGatcaat < 2:109557/150‑1 (MQ=255) aTGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCtt > 2:1669190/1‑107 (MQ=255) aTGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCtt < 1:1669190/107‑1 (MQ=255) aTGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAaga > 2:715867/1‑118 (MQ=255) aTGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAaga < 1:715867/118‑1 (MQ=255) cccAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCAAGCCcgctc < 1:1010333/104‑3 (MQ=255) cccAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCAAGCCcgctc > 2:1010333/1‑102 (MQ=255) cccAGTAGGCTTTGTGCTGGCCTCTTCGCGGCCACGCCCGCTCCTCCATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGAtct > 2:1908997/1‑150 (MQ=255) ccAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCCCTCCCACATGATCGCGCAACCTTCGGGGCC‑TGGGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGAtctc > 1:1630719/1‑150 (MQ=255) ggCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTg < 2:458472/90‑1 (MQ=255) ggCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTg > 1:458472/1‑90 (MQ=255) tGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGaggc > 1:635291/1‑150 (MQ=255) gCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGaggctc > 2:1248121/1‑150 (MQ=255) ctctTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGaggctcag > 1:2214598/1‑150 (MQ=255) tctTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGaggctcagg > 1:908493/1‑150 (MQ=255) tctTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGaggctcagg > 1:908234/1‑150 (MQ=255) tctTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCAACCGGaggctaagg < 2:635291/150‑1 (MQ=255) ttCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGaggctcaggct > 1:1776335/1‑150 (MQ=255) ttCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGAACTCCTCCTCCCCCGGaggcgcaggcc > 2:51080/1‑149 (MQ=255) aCGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGATGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTcccc > 1:736499/1‑150 (MQ=255) gCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGc < 1:422625/75‑1 (MQ=255) gCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGc > 2:422625/1‑75 (MQ=255) ccGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAg > 2:36864/1‑150 (MQ=255) gCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGat > 2:2007251/1‑150 (MQ=255) cTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGatc > 1:1185632/1‑150 (MQ=255) tCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGatca > 1:1944699/1‑150 (MQ=255) cTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGatcatc > 1:1532552/1‑150 (MQ=255) aTGNTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCaaaa > 2:1500636/1‑150 (MQ=255) cgcgCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGt < 2:1532552/150‑1 (MQ=255) gcgcAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGtt > 2:1780235/1‑150 (MQ=255) gcgcAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGtt > 1:1961529/1‑150 (MQ=255) cgcAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGttt > 2:1876/1‑150 (MQ=255) gcAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGTGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCg < 1:1500129/145‑1 (MQ=255) gcAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGTGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCg > 2:1500129/1‑145 (MQ=255) aaCCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATctcctc < 2:1558563/97‑1 (MQ=255) aaCCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATctcctc > 1:1558563/1‑97 (MQ=255) aaCCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCa > 2:2006883/1‑150 (MQ=255) cTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGa > 1:1125181/1‑66 (MQ=255) cTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGa < 2:1125181/66‑1 (MQ=255) ttCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAAcc < 2:1961529/150‑1 (MQ=255) ttCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAAc < 2:376663/149‑1 (MQ=255) ttCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAAc > 1:376663/1‑149 (MQ=255) ggggCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGctcct > 2:1476748/1‑113 (MQ=255) ggggCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGctcct < 1:1476748/113‑1 (MQ=255) ggCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCtt > 2:536697/1‑150 (MQ=255) c‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCa > 1:2303963/1‑150 (MQ=255) tgtgATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCa < 2:1627958/42‑1 (MQ=255) tgtgATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCa > 1:1627958/1‑42 (MQ=255) tgtgATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAATTCGGTTTTCAAACCGTCTTCCAt < 2:1185632/150‑1 (MQ=255) tgtgATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCgg > 2:775864/1‑131 (MQ=255) tgtgATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCgg < 1:775864/131‑1 (MQ=255) tgtgATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCAt < 2:1630719/150‑1 (MQ=255) gtgATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATg < 2:2214598/150‑1 (MQ=255) gtgATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATg < 1:36864/150‑1 (MQ=255) gATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCACCTCCTCCACCGGAGGCTCCGGCACCTCTACCCTCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGc > 1:1982864/1‑150 (MQ=39) aCCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCg < 1:2265771/124‑1 (MQ=255) aCCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCg > 2:2265771/1‑124 (MQ=255) cccTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCa < 1:1876/150‑1 (MQ=255) tgtgGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTcc < 2:775560/100‑1 (MQ=255) tgtgGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTcc > 1:775560/1‑100 (MQ=255) gtgGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTc < 1:1248121/150‑1 (MQ=255) ctcttcgCGGGCAAGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGATCGTCTCCCCGCACATCATCAAAAGCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTc > 1:25343/7‑150 (MQ=38) agtaGCGCGCCTGCCCGCGAAAACTCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGTTTTTCAAACCGTCTTCCATGGCATCCAGCTcca < 2:736499/147‑1 (MQ=255) aGCTGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGACCATCACAATCGGTTTTCAAACCGTCTTCCATCGCATCCAGCTccacca > 2:285361/1‑150 (MQ=255) aGCGGGCTTGCCCGCGAAGAGGCGAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGAACTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTccaccc > 2:1184508/1‑149 (MQ=255) aGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGtttt < 1:1422494/118‑1 (MQ=255) aGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGtttt > 2:1422494/1‑118 (MQ=255) ggCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAg > 1:2047840/1‑150 (MQ=255) ggCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAg > 2:752074/1‑150 (MQ=255) gCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAgg > 1:497470/1‑150 (MQ=255) ttGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCt > 2:632604/1‑150 (MQ=255) | CAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCC‑TGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACCGGAGGCTCAGGCTCCTCTCCCCGCAGATCATCAAAATCGGTTTTCAAACCGTCTTCCATGGCATCCAGCTCCACCAACAGGCT > NC_002947/5112541‑5112838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |