| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,130,488 | C→G | 5.6% | D322H (GAC→CAC) | recQ ← | ATP‑dependent DNA 3'‑5' helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,130,488 | 0 | C | G | 5.6% | 334.2 / 7.1 | 106 | D322H (GAC→CAC) | recQ | ATP‑dependent DNA 3'‑5' helicase |
| Reads supporting (aligned to +/- strand): ref base C (53/47); new base G (2/4); total (55/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
TTTCTTCGCACAGCGCCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATCAGCCCTTCCTCGTTCAGGAAGC > NC_002947/5130341‑5130634 | aatcttcGAAAAGCGCCAGCATGGAGTCAAGATTGTGCAGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGAATCACCATGTACTGCAGCACGTAGGAAATCCAGGCATCGGAGGGCAGGCCGTCAc > 2:2334783/3‑150 (MQ=255) tcttcGCACAGCGCCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGGCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCAcgg < 1:26566/150‑1 (MQ=255) ttcGCACAGCGCCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCATCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCAcggcc > 2:1900375/1‑150 (MQ=255) ttcGCACAGCGCCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCAcggcc > 2:2166019/1‑150 (MQ=255) ttcGCACAGCGCCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCAcggcc > 2:1904471/1‑150 (MQ=255) ttcGCACAGCGCCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCAcggcc > 2:1904531/1‑150 (MQ=255) cacaGCGCCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTAGGCCGCACT‑CGACATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCCGGCCGTGACggcctgcc < 1:1970785/150‑1 (MQ=255) acaGCGCCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCCGGCCGTGACGGcctgccc < 2:2416237/150‑1 (MQ=255) gcCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCccggccg < 1:417622/150‑1 (MQ=255) gcCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCccggccg < 1:675462/150‑1 (MQ=255) ccAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCccggccgg > 1:79119/1‑150 (MQ=255) aGCATGGCGTCCGGCTTGTGCTGCTCGGTGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGCCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGtt < 2:316374/150‑1 (MQ=255) cATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCCGGCCGTGACGGcctgccctccga > 2:566804/1‑140 (MQ=255) cATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCCGGCCGTGACGGcctgccctccga < 1:566804/145‑6 (MQ=255) tGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCt < 1:1783831/150‑1 (MQ=255) gCGTCCAGCTTGTGCTGCTCGATGCGCTTGTTGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGa < 1:2206151/150‑1 (MQ=255) gTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGAta > 2:2058027/1‑150 (MQ=255) gTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGAta < 1:2166019/150‑1 (MQ=255) ccAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGAtagt > 2:1162647/1‑150 (MQ=255) cAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCCGGCATCGGCGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGAtagta < 1:53662/150‑1 (MQ=255) aGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGAtagtag > 1:649458/1‑150 (MQ=255) gctgctCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGTCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCaa < 2:1598663/150‑1 (MQ=255) gctgctCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCaa < 1:1904471/150‑1 (MQ=255) gctgctCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCaa < 1:1904531/150‑1 (MQ=255) gctCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCAcggccg > 2:2263120/1‑116 (MQ=255) gctCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCAcggccg < 1:2263120/116‑1 (MQ=255) ctCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGa > 1:139614/1‑150 (MQ=255) tCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGTCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGAt < 2:2036100/150‑1 (MQ=255) gATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCaa > 1:1353270/1‑143 (MQ=255) gATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCaa < 2:1353270/143‑1 (MQ=255) gATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGAttt > 2:2113876/1‑150 (MQ=255) tGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCGGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTgg < 1:1604429/150‑1 (MQ=255) gcTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCa > 1:632194/1‑150 (MQ=255) gcgcTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAg < 1:1962886/150‑1 (MQ=255) gcgcTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAg < 1:1162647/150‑1 (MQ=255) gcTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGt > 1:1524500/1‑150 (MQ=255) cgtcgCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAg < 2:649458/150‑1 (MQ=255) cTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGa > 2:494032/1‑150 (MQ=255) cTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGa < 2:2170315/150‑1 (MQ=255) cTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGa > 1:1383083/1‑150 (MQ=255) ttCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGaa > 1:444981/1‑150 (MQ=255) ttagaaGTGCTGCAGCATCTGCTTGAGCATCACCCTGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGaa > 2:525782/6‑150 (MQ=255) tCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAg > 2:2064804/1‑150 (MQ=255) cGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAg < 2:1617265/130‑1 (MQ=255) aGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCa > 1:261766/1‑150 (MQ=255) aGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCa > 1:261857/1‑150 (MQ=255) gTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCAc > 1:2022428/1‑150 (MQ=255) gTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCAc > 2:1396136/1‑150 (MQ=255) cagcaTCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTggg < 1:2113876/150‑1 (MQ=255) cagcaTCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTggg < 1:1668321/150‑1 (MQ=255) tCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCCCGTTGGGCTTGt > 2:1315726/1‑150 (MQ=255) tCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGt < 1:1426137/150‑1 (MQ=255) cTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGt < 1:1995198/116‑1 (MQ=255) cTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGt > 2:1995198/1‑116 (MQ=255) cTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTc < 1:1900375/150‑1 (MQ=255) gCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGa < 2:2022428/150‑1 (MQ=255) cTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGAt > 2:104355/1‑150 (MQ=255) ttGAGCCTCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCCACGAAGCGCACGTTGGGCTTGTCGATa > 1:2165985/1‑150 (MQ=255) ttGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGa < 2:1897054/84‑1 (MQ=255) ttGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGa > 1:1897054/1‑84 (MQ=255) ttGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATa > 2:2369757/1‑150 (MQ=255) tCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGc < 1:2334783/150‑1 (MQ=255) tCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGc > 1:1527535/1‑150 (MQ=255) ccATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCAt < 1:1253815/145‑1 (MQ=255) ccATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGa > 2:1296100/1‑150 (MQ=255) ccATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAAGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCAt > 2:1253815/1‑145 (MQ=255) ccATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCGGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGa < 1:2369757/150‑1 (MQ=255) cATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGaa > 2:154207/1‑150 (MQ=255) aTGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGaaa > 2:1954143/1‑150 (MQ=255) gTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAgc > 1:1926956/1‑116 (MQ=255) gTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAgc < 2:1926956/116‑1 (MQ=255) tCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCa > 2:216829/1‑150 (MQ=255) cTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAAt > 1:1744851/1‑150 (MQ=255) cTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAAt > 2:536665/1‑150 (MQ=255) tGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATg < 2:1524500/150‑1 (MQ=255) gCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATgg < 1:2366625/150‑1 (MQ=255) aGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTa < 1:154207/150‑1 (MQ=255) aGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTa < 2:164009/150‑1 (MQ=255) cccGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGc < 2:444981/150‑1 (MQ=255) ccGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTggg > 2:1782101/1‑116 (MQ=255) ccGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTggg < 1:1782101/116‑1 (MQ=255) gCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTggg < 2:1141283/77‑1 (MQ=255) gCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTggg > 1:1141283/1‑77 (MQ=255) gCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCaa > 1:1072594/1‑136 (MQ=255) gCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCaa < 2:1072594/136‑1 (MQ=255) aTCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATc > 2:1110393/1‑150 (MQ=255) ccAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATCAg < 1:1396136/150‑1 (MQ=255) cAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAAt < 1:1219233/131‑1 (MQ=255) cAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAAt < 1:1219102/131‑1 (MQ=255) cAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAAt > 2:1219102/1‑131 (MQ=255) cAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAAt > 2:1219233/1‑131 (MQ=255) cAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATCAGc < 2:139614/150‑1 (MQ=255) aGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATCAGcc > 1:3671/1‑150 (MQ=255) aGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATCAGcc > 2:1831699/1‑150 (MQ=255) gccgggCCGGCCGTGACGGCCTGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATCAGCCCTTc < 2:455032/144‑1 (MQ=255) gccgggCCGGCCGTGACGGCCTGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATCAGCCCTTc > 1:455032/4‑147 (MQ=255) gCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTc < 2:1118028/93‑1 (MQ=255) gCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTc > 1:1118028/1‑93 (MQ=255) cGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATCAGCCCTTCCTCGTTCAGGAAGc < 1:1584660/150‑1 (MQ=255) cGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATCAGCCCTTCCTCGTTCAGGAAGc > 2:434117/1‑150 (MQ=255) | TTTCTTCGCACAGCGCCAGCATGGCGTCCAGCTTGTGCTGCTCGATGCGCTTGTGGCGCTCGTCGCCTTCGG‑AGTTCTGCAGCATCTGCTTGAGCATCACCATGTCCTGCAGCCCGTAGGCCATCCAGGCATCGGAGGGCAGGCCGTCACGGCCGGCCCGGCCGGTTTCCTGATAGTAGGCTTCAAGCGATTTGGGCAGGTCGAGGTGAGCAACGAAGCGCACGTTGGGCTTGTCGATACCCATGCCGAAAGCAATGGTAGCGACCATGATCAGCCCTTCCTCGTTCAGGAAGC > NC_002947/5130341‑5130634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |