| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,272,660 | C→G | 5.9% | A188G (GCC→GGC) | PP_4647 → | transcriptional regulator, LuxR family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,272,660 | 0 | C | G | 5.9% | 216.1 / 4.5 | 68 | A188G (GCC→GGC) | PP_4647 | transcriptional regulator, LuxR family |
| Reads supporting (aligned to +/- strand): ref base C (32/31); new base G (2/2); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
GTCGAACTGTACGACAAAGCTGGGAGCGTGCAGTGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCCAACAAGGCCGGAGCCATTGCCATTGCCGCCTTGCGTGGCTGGATCTGA > NC_002947/5272515‑5272805 | gTCGAACTGTACGACAAAGCTGGGCATGCATATGGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGc > 1:1637774/1‑150 (MQ=255) cGAACTGTACGACAAAGCTGGGAGCGTGCAGTGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCaa < 2:784728/150‑1 (MQ=255) tGTACGACAAAGCTGGGAGCGTGCAGTGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTCTTGCCGGCGGCagacca < 1:527894/150‑6 (MQ=255) tGTACGACAAAGCTGGGAGCGTGCAGTGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCg > 1:1910584/1‑150 (MQ=255) aaaGCTGGGAGCGTGCAGTGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGAt < 2:2188260/150‑1 (MQ=255) gCTGGGAGCGTGCAGTGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGtt < 2:130243/150‑1 (MQ=255) gCTGGGAGCGTGCAGTGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTACGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGtt < 1:1440474/150‑1 (MQ=255) tGGGAGCGTGCAGTGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGccgccg > 1:83791/1‑128 (MQ=255) tGGGAGCGTGCAGTGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGccgccg < 2:83791/128‑1 (MQ=255) gCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCt < 2:645319/150‑1 (MQ=255) tgtgCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGt > 1:1704370/1‑150 (MQ=255) cacacaCTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTTAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTTCCTCCATCCTCTCGCTGTCGCaa > 2:2398516/1‑150 (MQ=255) cacacaCTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCaa > 1:1567366/1‑150 (MQ=255) cacacaCTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCaa > 2:592882/1‑150 (MQ=255) cacacaCTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCaa > 2:591103/1‑150 (MQ=255) acacacTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCCACCCCGCTGCCGTTGTTGCCTCCGTCCTCACGCTGCCTCaaa > 2:1097924/1‑150 (MQ=255) acacacTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCaaa < 2:2108366/150‑1 (MQ=255) acacTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGc > 1:858904/1‑150 (MQ=255) ttCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGc < 1:569770/112‑1 (MQ=255) ttCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGc > 2:569770/1‑112 (MQ=255) gcgGTACTGCGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGACGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAAt > 2:321728/1‑150 (MQ=255) gatctaGCCCCGTCTGAGCGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCatat < 2:61024/145‑1 (MQ=255) aGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAAATTTAATATTAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCa < 2:1637774/150‑1 (MQ=255) gCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGCACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATcagatc > 1:61024/1‑145 (MQ=255) cACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCa < 1:2056277/140‑1 (MQ=255) cACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCa > 2:2056277/1‑140 (MQ=255) ccATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTTCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGt > 2:2414050/1‑150 (MQ=255) cATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTg > 1:773242/1‑150 (MQ=255) cATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTg > 2:2258629/1‑150 (MQ=255) cATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTg > 1:1108452/1‑150 (MQ=255) aTCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGa > 1:2283382/1‑150 (MQ=255) tCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGAt < 2:773242/150‑1 (MQ=255) tCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGAt < 2:1055569/150‑1 (MQ=255) tCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGAt > 1:2426822/1‑150 (MQ=255) tCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGAt < 1:2258629/150‑1 (MQ=255) gAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCAc < 1:1097924/150‑1 (MQ=255) gAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCAGCAGCGTGATCAc < 2:1058221/150‑1 (MQ=255) aCGCGCTATGCCCACCACAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCa > 1:440516/1‑150 (MQ=255) cgcgCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCaa > 1:1670078/1‑150 (MQ=255) cgcTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGa < 1:592882/150‑1 (MQ=255) cgcTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGa < 1:591103/150‑1 (MQ=255) ccACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCa < 2:1704370/150‑1 (MQ=255) cACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAg > 1:1857371/1‑150 (MQ=255) aCCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCata > 1:395713/1‑119 (MQ=255) aCCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCata < 2:395713/119‑1 (MQ=255) aCCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGc > 1:339330/1‑150 (MQ=255) cccAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCaa < 2:1281525/142‑1 (MQ=255) cccAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCaa > 1:1281525/1‑142 (MQ=255) aaCCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCcaaca > 1:2448974/1‑150 (MQ=255) ccGAAAATGGGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCCAACAAg < 2:805791/150‑1 (MQ=255) ccGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGtt > 2:1921213/1‑69 (MQ=255) ccGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGtt < 1:1921213/69‑1 (MQ=255) aaaaTGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGc > 2:1210211/1‑140 (MQ=255) aaaaTGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTCATCACCAAGACCAACGCAGc < 1:1210211/140‑1 (MQ=255) aTGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCCAACAAGGCCGGa < 2:1857371/150‑1 (MQ=255) cgagcgCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCa > 1:1925818/1‑81 (MQ=255) cgagcgCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCa < 2:1925818/81‑1 (MQ=255) gcgAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAAttt > 2:783838/1‑91 (MQ=255) gcgAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAAttt < 1:783838/91‑1 (MQ=255) cgAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACg < 2:2182745/82‑1 (MQ=255) cgAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACg > 1:2182745/1‑82 (MQ=255) tGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGCTTTACGCTGCCAACAAGGCCGGAGCCATTGCCATTGCCGCCTTGc < 2:1264656/150‑1 (MQ=255) cTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCCAACAAGGCCGGAGCCATTGCCATTGCCGCCTTGCGt < 2:858904/150‑1 (MQ=255) tGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCCAACAAGGCCGGAGCCATTGCCATTGCCGCCTTGCGTg > 1:718215/1‑150 (MQ=255) gAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCGCGCTGTCGCAAAGCACGGTCAAGTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCCAACAAGGCCGGAGCCATTGCCATTGCCGCCTTGCGTgg < 2:1657963/150‑1 (MQ=255) gtcttGCCGGCGGC‑AGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCcaa > 1:1343569/5‑108 (MQ=255) gtcttGCCGGCGGC‑AGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCcaa < 2:1343569/104‑1 (MQ=255) gTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCa < 1:885455/72‑1 (MQ=255) gTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCa > 2:885455/1‑72 (MQ=255) tcttGCCGGCGGC‑AGACCGCTGCCGATGTTGCCTCCATCCTCTAGCTGTTTCTTAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCCAACAAGGCCGGAGCCATTGCCATTGCCGCCTTGCGTGGCTGgatc > 1:2274086/4‑150 (MQ=255) gccgccGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCCAACAAGGCCGGAGCCATTGCCATTGCCGCCTTGCGTGGCTGgatctga < 2:1567366/150‑1 (MQ=255) gccgccGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCCAACAAGGCCAGAGCCATTGCCATTGCCGCCTTGCGTGGCTGgatctga > 1:1310708/1‑150 (MQ=255) ccgccgGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAAc < 1:1452283/95‑1 (MQ=255) ccgccgGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAAc > 2:1452283/1‑95 (MQ=255) | GTCGAACTGTACGACAAAGCTGGGAGCGTGCAGTGGCTGTGCCACACACTTCACGCGGTACTGGGCGAGCACCATCTGAACGCGCTATGCCCACCCCAACCGAAAATGAGCGAGCGCGAACTGGAAGTGCTGAAATGGTC‑TGCCGCCGGCAAGACCGCTGCCGATGTTGCCTCCATCCTCTCGCTGTCGCAAAGCACGGTCAATTTCCATATCCGCAGCGTGATCACCAAGACCAACGCAGCCAACAAGGCCGGAGCCATTGCCATTGCCGCCTTGCGTGGCTGGATCTGA > NC_002947/5272515‑5272805 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |