| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,352,028 | A→C | 10.7% | intergenic (‑233/+31) | PP_4707 ← / ← pnp | OsmY‑like protein/polyribonucleotide nucleotidyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,352,028 | 0 | A | C | 10.7% | 227.9 / 21.4 | 94 | intergenic (‑233/+31) | PP_4707/pnp | OsmY‑like protein/polyribonucleotide nucleotidyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (46/38); new base C (5/5); total (51/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.32e-01 | |||||||||||
GCTGCTTCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGT > NC_002947/5351881‑5352175 | gctgctTCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAg < 1:514937/150‑1 (MQ=255) ctgntTCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAgg > 2:1501696/1‑150 (MQ=255) ctgctTCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGNAgg < 2:1512275/150‑1 (MQ=255) tCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTTCGCAGGGCCCt < 1:1158810/150‑1 (MQ=255) ttCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTTCGCAGGGCCCttt < 2:2120916/144‑1 (MQ=255) ttCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTTCGCAGGGCCCttt > 1:2120916/1‑144 (MQ=255) tctttttAAATCAGTAAGTTAGCGAATATCTATCACTTCGGTGGTCGTGAATTTTGCAATCAGCGCGGTAAACCTGCATGAAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTAtt < 2:945318/147‑1 (MQ=255) tAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGa < 1:801877/150‑1 (MQ=255) aaTAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTTCGCAGGGCCCtttt < 1:2305570/132‑2 (MQ=255) aaTAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTTCGCAGGGCCCtttt > 2:2305570/1‑131 (MQ=255) aTAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGc > 2:1420967/1‑150 (MQ=255) aTAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGc < 1:1896342/150‑1 (MQ=255) tAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTNGCAATCNGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCt > 1:2162951/1‑150 (MQ=255) gTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAg > 2:1491127/1‑150 (MQ=255) gCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAg > 1:404376/1‑114 (MQ=255) gCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAg < 2:404376/114‑1 (MQ=255) gCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGc > 1:685205/1‑150 (MQ=255) aaaTATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGccc > 2:784480/1‑150 (MQ=255) atatCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTATCTATAGAGTTTCTTGCGCTTAGACGCCCGa > 1:722195/1‑150 (MQ=255) tatctatcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAg < 1:2329310/150‑1 (MQ=255) tctatcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGc < 1:1648673/150‑1 (MQ=255) tatcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCt > 2:2136957/1‑150 (MQ=255) tatcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCt > 1:289050/1‑150 (MQ=255) tatcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCt > 1:1755474/1‑150 (MQ=255) atcACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCACAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTTACGTTCGCTTAGACGCCCGAGGCCtt > 1:661089/1‑150 (MQ=255) aCTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGGCCGAGGGCTTGGc > 1:405969/1‑150 (MQ=255) ttCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTgg > 2:1069701/1‑147 (MQ=255) ttCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTgg < 1:1069701/147‑1 (MQ=255) ttCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCg > 1:52547/1‑150 (MQ=255) tGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCt < 2:685205/150‑1 (MQ=255) aTTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTg > 1:597435/1‑150 (MQ=255) ttttGCAATCAGCGCGGTAAACCTGCATGCAAAATGCAAGTCCGCAAAAGGTTCCAGCTCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGATGCCTTGGCCGCATGGACGTCTTTGa < 1:982763/150‑1 (MQ=255) ttGCAATCAGCGCGGTAACCCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTCCGAGGGGCCCCTTCGCCGCTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATc < 1:292627/150‑1 (MQ=255) gCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGa > 1:1069186/1‑150 (MQ=255) aaTCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACa > 1:581761/1‑150 (MQ=255) aaTCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACa > 1:2360163/1‑150 (MQ=255) aGCGCGGTAAACCGGCATGCAAGATGTAAGTCCGCAAAAGGTTCCCGTTCCCATGAAAAAAGGGCCCTGCGAAGGGCCTTGTCTCGGTTGCGTGACGTTCGCTTAGACGCCTGAGGGCTTGGAGGCAGGGAAGTCTTTAATCGACAGCtt < 2:597435/150‑1 (MQ=255) gcgcGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTtctc < 2:1020203/84‑1 (MQ=255) gcgcGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTtctc > 1:1020203/1‑84 (MQ=255) gcgcGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTg > 1:370854/1‑150 (MQ=255) cgcgGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGa < 1:2136957/150‑1 (MQ=255) ggTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAgg > 1:1794000/1‑124 (MQ=255) ggTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAgg < 2:1794000/124‑1 (MQ=255) ggTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATAc > 1:1504425/1‑150 (MQ=255) ggTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATAc < 2:1069186/150‑1 (MQ=255) tAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACgg < 2:1435581/150‑1 (MQ=255) tAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACgg > 1:2202454/1‑150 (MQ=255) aaCCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGcc > 1:1438443/1‑150 (MQ=255) cTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGa < 1:925730/95‑1 (MQ=255) cTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGa > 2:925730/1‑95 (MQ=255) tgcatgcaAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCgg > 2:1232725/1‑150 (MQ=255) gcaagatgcaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTgg > 1:871155/1‑104 (MQ=255) gcaagatgcaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTgg < 2:871155/104‑1 (MQ=255) gcaagatgcaagTCCGAAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTAGTGCGTGACGTTCGCTTAGACGCCCGAGGCCATGGCCGCAGGGACGTCTTTGATCGACAGCTTGCTACGGCCGAGGTTGTc > 2:1225024/1‑150 (MQ=255) aagatgcaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGAc < 2:128382/112‑1 (MQ=255) aagatgcaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGAc > 1:128382/1‑112 (MQ=255) tgaaagTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGTCTTCATCGCATTGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTc < 2:1797486/147‑1 (MQ=255) gTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCt < 1:191830/74‑1 (MQ=255) gTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCt > 2:191830/1‑74 (MQ=255) tCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATa > 1:581627/1‑124 (MQ=255) tCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATa < 2:581627/124‑1 (MQ=255) cGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACaa < 1:784480/150‑1 (MQ=255) gCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAg > 2:241657/1‑150 (MQ=255) gCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAg > 1:2232563/1‑150 (MQ=255) ggTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGACGCGGTTGTCCACGTCCAGTACAAGCACTTc < 2:2162951/150‑1 (MQ=255) gTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTGCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCa > 2:1235344/1‑150 (MQ=255) ttCCCGTCCCCATGAACGGAGCGCCCGGCGAAGTGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCaa < 1:122637/150‑1 (MQ=255) cccGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCtt > 1:2318592/1‑94 (MQ=255) cccGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCtt < 2:2318592/94‑1 (MQ=255) cccATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTgg > 1:331802/1‑150 (MQ=255) cacATGAAAAAATGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGATTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTgg > 2:1912931/3‑150 (MQ=255) ccATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGc > 1:2011865/1‑150 (MQ=255) ccATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGc < 2:331802/150‑1 (MQ=255) cATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGcc > 1:2249552/1‑150 (MQ=255) cATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGcc > 2:2243567/1‑150 (MQ=255) tagagaaaGGGCCCTTCGCAGGGCCCTTTTTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCaa < 1:582771/133‑1 (MQ=255) tagagaaaGGGCCCTTCGCAGGGCCCTTTTTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCaa > 2:582771/6‑138 (MQ=255) gAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTc > 2:1850321/1‑135 (MQ=255) gAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTc < 1:1850321/135‑1 (MQ=255) aaaaGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGccttcctt < 2:1755474/150‑1 (MQ=255) aaaGGGCCCTTCGCAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACtt < 1:1777255/130‑1 (MQ=255) aaaGGGCCCTTCGCAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACtt > 2:1777255/1‑130 (MQ=255) aaGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGa < 2:289050/150‑1 (MQ=255) aaGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGa < 2:370854/150‑1 (MQ=255) aaGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGa < 1:1232725/150‑1 (MQ=255) aGGGCCCTTCGCAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAg > 1:2442304/1‑150 (MQ=255) ccTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTa > 2:551846/1‑114 (MQ=255) ccTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTa < 1:551846/114‑1 (MQ=255) tGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCa > 2:1363212/1‑109 (MQ=255) tGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCa < 1:1363212/109‑1 (MQ=255) tGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCg > 2:1915585/1‑150 (MQ=255) gCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCTGAg > 2:1901818/1‑47 (MQ=255) cGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGt < 2:52547/150‑1 (MQ=255) cGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGCCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGt < 1:975594/150‑1 (MQ=255) cGAAGGGCCCTTTCTCTATTGCGTGACGTTCGATTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGt < 1:1912931/150‑1 (MQ=255) | GCTGCTTCTGTTATTTCCTTTTAAATCAATAAGTTAGCAAATATCTATCACTTCGGTGGTCGTGCATTTTGCAATCAGCGCGGTAAACCTGCATGCAAGATGCAAGTCCGCAAAAGGTTCCCGTCCCCATGAAAAAAGGGCCCTGCGAAGGGCCCTTTCTCTATTGCGTGACGTTCGCTTAGACGCCCGAGGCCTTGGCCGCAGGGACGTCTTTGATCGACAGCTTGATACGGCCGCGGTTGTCCACGTCCAGTACAAGCACTTCAACTTCCTGGCCTTCCTTGAGGATGTCGGT > NC_002947/5351881‑5352175 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |