| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,362,263 | C→G | 6.6% | V49L (GTG→CTG) | tpiA ← | triose phosphate isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,362,263 | 0 | C | G | 6.6% | 276.7 / 10.0 | 91 | V49L (GTG→CTG) | tpiA | triose phosphate isomerase |
| Reads supporting (aligned to +/- strand): ref base C (44/41); new base G (3/3); total (47/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.09e-01 | |||||||||||
CGAATGGCCAATCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAGGGCGACGCATG > NC_002947/5362120‑5362408 | cGAATGGCCAATCAACACCAACTTGCAACCTGCTTCAACCAGCTCATCGAGAGTCCCTTACTCGAACCCGGCATGGCGCTGACGGTGGACAGGAGGATTTTGTTTGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCtgatt < 2:1463690/150‑1 (MQ=255) gAATGGCCAATCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCtgattg > 1:2422347/1‑150 (MQ=255) aaTGGCCAATCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGGTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCtgattga < 1:1209609/150‑1 (MQ=255) cAATCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGTCATCAATCAGGTGATtgatggcct < 2:1634058/150‑5 (MQ=255) aaTCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCAGGTGATtgatg < 1:1010705/145‑1 (MQ=255) aaTCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCAGGTGATtgatg > 2:1010705/1‑145 (MQ=255) aaTCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACaa > 1:215351/1‑150 (MQ=255) aaTCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACaa > 1:2228523/1‑150 (MQ=255) aaTCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACaa > 1:2228268/1‑150 (MQ=255) tCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTAGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAgg > 1:441481/1‑150 (MQ=255) tCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGAAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAgg > 2:801796/1‑150 (MQ=255) cAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGc < 2:1649925/150‑1 (MQ=255) cAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTgg < 2:215351/150‑1 (MQ=255) cAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTgg > 1:951239/1‑150 (MQ=255) aaCTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGa > 2:2258864/1‑150 (MQ=255) cTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGa < 1:579981/148‑1 (MQ=255) cTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGa > 2:579981/1‑148 (MQ=255) ttGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAAt > 1:814560/1‑150 (MQ=255) gCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATAc < 2:2123266/150‑1 (MQ=255) aaCCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCAGGTGATtgatggc < 1:236358/130‑3 (MQ=255) aaCCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCAGGTGATtgatggc > 2:236358/1‑128 (MQ=255) aaCCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACgg > 1:390031/1‑150 (MQ=255) aaCCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACgg < 2:960172/150‑1 (MQ=255) aCCTGCTTCAACCAGCTGCTCGGGAGCCACTTACACGGTCTGTCCTCCCTTTTCGGGTTGTACAGCAGAATCCTGCGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGc < 1:2377108/150‑1 (MQ=255) aCCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGc > 1:2415205/1‑150 (MQ=255) aCCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGc < 1:1427785/150‑1 (MQ=255) aCCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGc < 1:801796/150‑1 (MQ=255) tGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGCTTGATGAACAAGGCCGGTGGAAATACGGCGAc < 2:121316/150‑1 (MQ=255) tGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGGACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCACTCACCTGATTGATGAACAAGGCCGGGGGAAATACGGCGAc < 2:945738/150‑1 (MQ=255) cTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGc < 2:1508331/145‑1 (MQ=255) cTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGc > 1:1508331/1‑145 (MQ=255) cAACCCCCTGCCCCGGAGCAAATTCCCCGGTCAGCGCACCCTGTTCGTGTTGCACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAAGCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCa < 2:2023809/150‑1 (MQ=255) ccAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTc < 1:1807974/150‑1 (MQ=255) ccAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTc > 2:1998877/1‑150 (MQ=255) ccAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTc > 2:1998809/1‑150 (MQ=255) gctgctAGGGAGCAACTTCCCCGGTCAGCGCACCCTGTCCGGGCTGTACAGAAGACTTCTGTGAGCAGACAGTAATTTCTTTACATGCCAGGCCATCAATCACCTGATTCATGAACAAGGCCGGGGGAAATACGCCGACTCCCACTCCGc > 2:988113/1‑150 (MQ=255) gctgctAGGGAGCAACTTCCCCGGCCAGAGAACCCCGTTCGGGATGTACAGAAGAATTATATGAACCGAAAGTAATTTTTTTTCCTGCAATTCCATCAAACACCTGATTAATAAACAAGGCCGGCGGAAATACGGCGACTTCCACTCCGc > 2:988535/1‑150 (MQ=255) gAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAgg < 2:2415205/150‑1 (MQ=255) aGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGc < 1:1998809/150‑1 (MQ=255) aGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGc < 1:1998877/150‑1 (MQ=255) aaCTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCgag > 1:2183941/1‑150 (MQ=255) aaCTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAAGACAGGGGGTAAACGGCATTTTCCACTCCGCTCGGCAAGGCgag > 2:1840728/1‑150 (MQ=255) tCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTa < 1:988113/150‑1 (MQ=255) tCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTa < 1:988535/150‑1 (MQ=255) ccGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGAttccgc > 1:1140233/1‑146 (MQ=255) ccGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTc < 2:2422347/150‑1 (MQ=255) ccGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTc > 2:1340520/1‑150 (MQ=255) cGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGc > 2:799008/1‑139 (MQ=255) cGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGc < 1:799008/139‑1 (MQ=255) cGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGAGAGATTACTcc > 2:2086611/1‑149 (MQ=255) gTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGGAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAg < 2:1079373/150‑1 (MQ=255) gcgcACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTc > 1:1709385/1‑115 (MQ=255) gcgcACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTc < 2:1709385/115‑1 (MQ=255) cccTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCCAGCCTTTGGtc < 2:33299/150‑1 (MQ=255) ggtgggTACAGCAGAAGTCTGTGCGCCGACAGTAATTTCTTGACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGtcagctcagc < 2:814560/145‑1 (MQ=255) ttGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGAc > 2:2368427/1‑150 (MQ=255) tACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCt > 2:790863/1‑150 (MQ=255) tACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCt > 2:2056030/1‑150 (MQ=255) agAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGcgcg > 2:1713663/1‑150 (MQ=255) gAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCgg < 1:1340520/150‑1 (MQ=255) aaTTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCggg > 1:1792391/1‑150 (MQ=255) ttCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTa > 2:1928583/1‑150 (MQ=255) ccGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCAtt < 2:1469803/150‑1 (MQ=255) ccGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCAtt > 1:1469803/1‑150 (MQ=255) aCAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTc < 1:396419/150‑1 (MQ=255) aGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCa < 1:790863/150‑1 (MQ=255) aGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCAACTCCGCTCGGCAAGGCGGGATTACTCAAGCCTTTGGTCAGCCCAGCGACGCTAGCGCGGGTACCGTGCATGTTCCa < 2:441481/150‑1 (MQ=255) tAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGt > 1:620468/1‑150 (MQ=255) aaTTTCTTTACCTGCCAGGCCATCAATCGCCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGtt > 1:1457495/1‑150 (MQ=255) aaTTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCTACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGtt < 2:2228523/150‑1 (MQ=255) aaTTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGtt < 2:2228268/150‑1 (MQ=255) tttCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAgg > 1:586681/1‑45 (MQ=255) tttCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAgg < 2:586681/45‑1 (MQ=255) tttCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTAc > 2:2006738/1‑150 (MQ=255) cTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAgcgc > 1:908281/1‑123 (MQ=255) cTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAgcgc < 2:908281/123‑1 (MQ=255) tttACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGc > 1:900466/1‑150 (MQ=255) ccTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTAcc > 1:661461/1‑150 (MQ=255) cTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCa > 2:16017/1‑150 (MQ=255) gcgggCCATCAATCGCCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAg < 2:951239/147‑1 (MQ=255) cAGGCCATGCAGCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCTAGCCTCTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAgg < 2:1140233/150‑1 (MQ=255) cAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAgg < 2:900466/150‑1 (MQ=255) aGGCCATCAATCACCTGATTGATGAATAAGGCCGGGGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAggg > 1:564950/1‑150 (MQ=255) aGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAggg < 1:77413/150‑1 (MQ=255) gCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAGGGCg > 2:844903/1‑150 (MQ=255) cATCAATCACCTCACTGATGCACAAGGCCGGTGGAAATACGGCGACTTCCGCTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCATGGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAGGGCGAc < 2:2169447/150‑1 (MQ=255) atcaatcaGGTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAGGGCGACg > 2:715773/1‑150 (MQ=255) atcaatcaCCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTAc > 1:220056/1‑138 (MQ=255) atcaatcaCCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTAc < 2:220056/138‑1 (MQ=255) tcaatcaCCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAGGGCGACGc > 2:760640/1‑150 (MQ=255) atcaCCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAGGGCGACGCATg > 1:707660/1‑150 (MQ=255) | CGAATGGCCAATCAACACCAACTTGCAACCTGCTTCAACCAGCTGCTCGGGAGCAACTTCCCCGGTCAGCGCACCCTGTTCGGGTTGTACAGCAGAATTCTGTGCGCCGACAGTAATTTCTTTACCTGCCAGGCCATCAATCACCTGATTGATGAACAAGGCCGGTGGAAATACGGCGACTTCCACTCCGCTCGGCAAGGCGAGATTACTCAAGCCTTTGGTCAGCTCAGCGACGCTAGCGCGGGTACCGTGCATTTTCCAGTTACCAGCTACCATAGGGCGACGCATG > NC_002947/5362120‑5362408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |