Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,366,334 G→A 5.5% V90V (GTC→GTT ftsH ← integral membrane ATP‑dependent zinc metallopeptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,366,3340GA 5.5% 261.6 / 2.5 90V90V (GTC→GTTftsHintegral membrane ATP‑dependent zinc metallopeptidase
Reads supporting (aligned to +/- strand):  ref base G (42/42);  new base A (2/3);  total (44/46)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01

CATCGGCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATCCTTGACCTGCT  >  NC_002947/5366193‑5366482
                                                                                                                                             |                                                                                                                                                    
cATCGGCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGCATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTg                                                                                                                                              <  1:622310/150‑1 (MQ=255)
 aTCGGCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAAGCTGACGCCGGAATTGCTCCGCCGGCTGGTGATTGTCGCCTCCGGCATCTTCGCCCATAGGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTgg                                                                                                                                             <  2:1464276/150‑1 (MQ=255)
 aTCGGCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTgg                                                                                                                                             >  2:1767760/1‑150 (MQ=255)
  tCGNCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGt                                                                                                                                            >  2:1515607/1‑150 (MQ=255)
  tCGGCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGt                                                                                                                                            <  2:106547/150‑1 (MQ=255)
   cGGCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGtt                                                                                                                                           <  1:2084617/150‑1 (MQ=255)
      cccgcccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTc                                                                                                                                        <  1:908408/150‑1 (MQ=255)
       ccgcccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGGCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTACGACGACCACGGGGTTGTCg                                                                                                                                       >  2:45548/1‑150 (MQ=255)
          cccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGAcc                                                                                                                                    <  1:1314228/150‑1 (MQ=255)
          cccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACAACCACGTGGTCGTCGaag                                                                                                                                    <  1:810861/150‑3 (MQ=255)
           ccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGt                                                                                                                                         <  2:978165/144‑1 (MQ=255)
           ccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGt                                                                                                                                         >  1:978165/1‑144 (MQ=255)
           ccTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCa                                                                                                                                   >  1:2179214/1‑150 (MQ=255)
              tGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGAt                                                                                                                                <  1:525993/150‑1 (MQ=255)
                  gcccgcGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACAACCACGTGGTCGTCGaag                                                                                                                                    <  2:2127080/142‑3 (MQ=255)
                  gcccgcGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACAACCACGTGGTCGTCGaag                                                                                                                                    >  1:2127080/1‑140 (MQ=255)
                    ccgcGCCACCTTGCATCTGGCGCATGAAGAACCTGCCCCCGACAAAGATCGCCAGGATCGGGAAGCTCGCCCAAGGCTACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGa                                                                                                                          <  1:1115851/150‑1 (MQ=255)
                              ttGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCAtt                                                                                                                >  2:1693072/1‑150 (MQ=255)
                                gCATCTGGCGCAGGAAGAACATGAACACGGCAATGATCACCAGGATAGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGt                                                                                                              >  2:1058637/1‑150 (MQ=255)
                                 cATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTc                                                                                                             >  1:2111281/1‑150 (MQ=255)
                                  aggtGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCg                                                                                                            <  1:2408700/147‑1 (MQ=255)
                                  aTCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGc                                                                                                                             <  2:2063915/133‑1 (MQ=255)
                                  aTCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGc                                                                                                                             >  1:2063915/1‑133 (MQ=255)
                                  aTCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCg                                                                                                            <  2:125417/150‑1 (MQ=255)
                                    cTGGCGCATGAAGAACATGATCACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGt                                                                                                          <  1:1767760/150‑1 (MQ=255)
                                    cTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGt                                                                                                          <  2:2179214/150‑1 (MQ=255)
                                    cTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGt                                                                                                          <  2:1528376/150‑1 (MQ=255)
                                       gcgcATGAAGAACATGAACACGGCAATGATCACCCGGAGCGGTAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGAt                                                                                                       <  2:2016965/150‑1 (MQ=255)
                                        cgcATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATg                                                                                                      <  2:430466/150‑1 (MQ=255)
                                        cgcATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATg                                                                                                      <  2:1823257/150‑1 (MQ=255)
                                           aTGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGcc                                                                                                   >  2:2281803/1‑150 (MQ=255)
                                             gaagaaCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCgg                                                                                                 <  1:918047/150‑1 (MQ=255)
                                              aagaaCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGa                                                                                                                                 >  1:15009/1‑117 (MQ=255)
                                              aagaaCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGa                                                                                                                                 <  2:15009/117‑1 (MQ=255)
                                              aagaaCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGGGCGCCGATCAGGCCATTGTCGGTGATGGCCggg                                                                                                >  2:2409807/1‑150 (MQ=255)
                                               agaaCATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGgc                                                                                               <  1:1274437/150‑1 (MQ=255)
                                                   cATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTTCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGcac                                                                                           >  1:302857/1‑150 (MQ=255)
                                                   cATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGcac                                                                                           >  1:1275160/1‑150 (MQ=255)
                                                    aTGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGcaca                                                                                          <  2:725848/150‑1 (MQ=255)
                                                     tGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGtt                                                                                                                                           >  1:2190281/1‑100 (MQ=255)
                                                     tGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGtt                                                                                                                                           <  2:2190281/100‑1 (MQ=255)
                                                      gAACACGGCAATGATCGCCAGGATCGGGAAGCTCGCCACCAGCACCGGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCCTCGACCACCACGTGGTTGTCGACCAGATCGCCCATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGt                                                                                        <  2:415813/150‑1 (MQ=255)
                                                       aaCACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTc                                                                                       >  1:1781678/1‑150 (MQ=255)
                                                       aaCACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACAACCACGTGGTCGTCGaag                                                                                                                                    <  1:100897/105‑3 (MQ=255)
                                                       aaCACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACAACCACGTGGTCGTCGaag                                                                                                                                    >  2:100897/1‑103 (MQ=255)
                                                             gCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGTGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAg                                                                                 <  1:1592641/150‑1 (MQ=255)
                                                             gCAATGATCACCAGGATCCGGAAGCTCGCCACCAGCAACCGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAg                                                                                 <  1:959296/150‑1 (MQ=255)
                                                              cAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGt                                                                                >  1:783540/1‑150 (MQ=255)
                                                               aaTGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGaa                                                                                  <  1:2059571/147‑1 (MQ=255)
                                                               aaTGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGaa                                                                                  >  2:2059571/1‑147 (MQ=255)
                                                                  gATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTc                                                                            <  2:531682/150‑1 (MQ=255)
                                                                  gATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTc                                                                            <  1:1515607/150‑1 (MQ=255)
                                                                   aTCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATAAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCg                                                                           >  1:2355703/1‑150 (MQ=255)
                                                                       ccAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGCTGGCTACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCAt                                                                       >  1:148198/1‑150 (MQ=255)
                                                                        cAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATc                                                                      >  2:1361043/1‑150 (MQ=255)
                                                                        cAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATc                                                                      >  2:1907419/1‑150 (MQ=255)
                                                                          ggATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCgg                                                                    >  1:538016/1‑150 (MQ=255)
                                                                                ggAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCt                                                              >  2:1543958/1‑150 (MQ=255)
                                                                                     cTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATc                                                                                                                               <  2:2001062/80‑1 (MQ=255)
                                                                                     cTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATc                                                                                                                               >  1:2001062/1‑80 (MQ=255)
                                                                                      tCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAg                                                        >  1:2450305/1‑150 (MQ=255)
                                                                                        gCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTa                                                      <  2:538016/150‑1 (MQ=255)
                                                                                             caGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGaa                                                                                  >  1:2301854/1‑117 (MQ=255)
                                                                                             caGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGaa                                                                                  <  2:2301854/117‑1 (MQ=255)
                                                                                             caGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCtt                                                             <  1:2166757/138‑1 (MQ=255)
                                                                                             caGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCtt                                                             >  2:2166757/1‑138 (MQ=255)
                                                                                              aGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAatgatg                                                <  2:1826688/150‑1 (MQ=255)
                                                                                               gCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGgtgt                                               <  2:2450305/150‑1 (MQ=255)
                                                                                                    tGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCa                                          >  1:1548337/1‑150 (MQ=255)
                                                                                                           aGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACgg                                   <  2:1781678/150‑1 (MQ=255)
                                                                                                           aGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACgg                                   >  1:1053336/1‑150 (MQ=255)
                                                                                                           aGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACgg                                   >  1:1053100/1‑150 (MQ=255)
                                                                                                                   tGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCCGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGCACGATGAGCAATAATGATGTAGCCATCGACGGTCACACGc                           >  2:1378728/1‑150 (MQ=255)
                                                                                                                    gTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCt                          >  2:1377144/1‑150 (MQ=255)
                                                                                                                        cTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTc                                                                            >  2:501090/1‑96 (MQ=255)
                                                                                                                        cTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTc                                                                            <  1:501090/96‑1 (MQ=255)
                                                                                                                        cTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGAc                      >  1:2294028/1‑150 (MQ=255)
                                                                                                                        cTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGAc                      <  2:1548337/150‑1 (MQ=255)
                                                                                                                         tCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTgc                                                                 <  1:1405529/106‑1 (MQ=255)
                                                                                                                         tCAGGCTGCTTGCCTTCGACGACCACGTGGATGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTgc                                                                 >  2:1405529/1‑106 (MQ=255)
                                                                                                                           aGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCa                                                                        >  2:2077140/1‑97 (MQ=255)
                                                                                                                           aGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCa                                                                        <  1:2077140/97‑1 (MQ=255)
                                                                                                                            ggCTGCTCGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGACATTGCCGGTGATACCCGTTCTCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTTCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTg                  <  1:542495/150‑1 (MQ=255)
                                                                                                                             gctgctTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGAc                      >  1:1899216/1‑145 (MQ=255)
                                                                                                                             gctgctTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGAc                      <  2:1899216/145‑1 (MQ=255)
                                                                                                                                 ctTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATc             >  2:2012397/1‑150 (MQ=255)
                                                                                                                                  ttGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATcc            >  2:2052781/1‑150 (MQ=255)
                                                                                                                                  ttGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATcc            <  2:2294028/150‑1 (MQ=255)
                                                                                                                                       ttCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCTAGTAATTATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATCCTTGAc       >  1:1344371/1‑150 (MQ=255)
                                                                                                                                       ttCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATCCTTGAc       >  2:362807/1‑150 (MQ=255)
                                                                                                                                           acgacCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGGAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATCCTTGACctgc   >  2:730597/1‑150 (MQ=255)
                                                                                                                                            cgacCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATCCTTGACctgct  <  2:2273359/150‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                    
CATCGGCCCGCCCTTGCCGCCCGCGCCACCTTGCATCTGGCGCATGAAGAACATGAACACGGCAATGATCACCAGGATCGGGAAGCTCGCCACCAGCAACTGCGTCCAGATGCTCTGTTGCTCAGGCTGCTTGCCTTCGACGACCACGTGGTTGTCGACCAGATCGCCGATCAGGCCATTGTCGGTGATGGCCGGGCGCACAGTCTTGAAGTTGTCGCCATCGGTGCGCTTGCCAGTAATGATGTAGCCATCGACGGTCACACGCTCGACCTTGCCATCCTTGACCTGCT  >  NC_002947/5366193‑5366482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: