| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,378,931 | C→G | 6.4% | A156A (GCC→GCG) | recN → | DNA repair/recombination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,378,931 | 0 | C | G | 6.4% | 370.6 / 12.5 | 119 | A156A (GCC→GCG) | recN | DNA repair/recombination protein |
| Reads supporting (aligned to +/- strand): ref base C (57/54); new base G (5/3); total (62/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.83e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
ATCAACGGCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGCGAGCACGA > NC_002947/5378782‑5379080 | aTCAACGGCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTGTGCCGGCGCCGTCGCCCTGGcc > 1:1932854/1‑150 (MQ=255)aTCAACGGCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGcc > 1:633029/1‑150 (MQ=255)aTCAACGGCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGAGCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGcc > 1:170600/1‑150 (MQ=255) tCAACGGCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGccc < 2:473913/150‑1 (MQ=255) tCAACGGCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGccc > 2:1930686/1‑150 (MQ=255) aCGGCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCGGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCCCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGcc > 2:951694/1‑150 (MQ=255) ggCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAg < 2:1865330/150‑1 (MQ=255) ggCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAg < 2:2347780/150‑1 (MQ=255) aCGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGGCCGCCAGGTa > 2:971878/1‑150 (MQ=255) gCCCTGCCCGCTCGGCGACCTCAAGGCGCTGTGCGAACTGCTGATCGATATCCACCGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACa > 2:2159561/1‑150 (MQ=255) cGCTCGGTGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAg < 1:1993314/150‑1 (MQ=255) cGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAg > 1:794541/1‑150 (MQ=255) cTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATCCACACAGCAAGCACTAGGACCAGTCCCTGCCCCCATTCTACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGcc < 1:1741860/150‑1 (MQ=255) tCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCa > 1:1419182/1‑150 (MQ=255) ccTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑g > 2:1742742/1‑150 (MQ=255) cTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑gg > 2:1475621/1‑150 (MQ=255) cTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCAGCAGACCTGGTCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑gg > 2:2018974/1‑150 (MQ=255) cAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGaa < 1:1447672/150‑1 (MQ=255) aaGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCGGGCCAGGtc > 2:249803/1‑125 (MQ=255) aaGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCGGGCCAGGtc < 1:249803/126‑2 (MQ=255) gcgcTGTGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAg < 1:2159561/150‑1 (MQ=255) gcTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGAc < 2:633029/150‑1 (MQ=255) cTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGAcc > 2:293332/1‑150 (MQ=255) tGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCa < 1:516656/145‑1 (MQ=255) ggCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAg > 2:282059/1‑114 (MQ=255) ggCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAg < 1:282059/114‑1 (MQ=255) ggCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGc > 1:373248/1‑150 (MQ=255) cGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCct < 2:1070683/150‑1 (MQ=255) aCTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGCCACGCctggc < 2:2445273/150‑2 (MQ=255) tgctgATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCctggagc < 2:484078/150‑1 (MQ=255) tgATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCctggagctgg > 1:1824212/1‑150 (MQ=255) caTCGATAGCCACAGCCACACCGAGCAACCGTCCCTGCTTAAGCCCGACACCCACCGCCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCctggagctgga < 2:1308260/149‑1 (MQ=255) aTCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCctggagctggag > 1:1481160/1‑150 (MQ=255) gATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAgcgc < 2:1932854/150‑1 (MQ=255) tCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGc < 2:1177071/102‑1 (MQ=255) tCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCctct > 2:388367/1‑150 (MQ=255) ccACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCtctc > 2:307751/1‑150 (MQ=255) acaGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAg < 1:1789074/92‑1 (MQ=255) acaGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCATACCAAACGGTCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCa > 2:2158247/1‑150 (MQ=255) gcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCa > 2:2400891/1‑114 (MQ=255) gcACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCggg > 2:1849775/1‑150 (MQ=255) cGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGAcccac < 1:683946/118‑3 (MQ=255) cGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGc > 2:683946/1‑118 (MQ=255) cGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGcga < 2:1859295/150‑1 (MQ=255) gAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGcgac < 2:1419182/150‑1 (MQ=255) cACCAGTCCCTGCTCAAGACCGACACCCACCGTCGACTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGag < 1:854018/150‑1 (MQ=255) ccAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGagca > 2:701412/1‑150 (MQ=255) cAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCCGGGAGTGCTTGCTTCCAGGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGagcag > 1:1483703/1‑150 (MQ=255) cAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAgg > 2:1737461/1‑76 (MQ=255) ccTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCa < 2:1623078/99‑1 (MQ=255) ccTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCa > 1:1623078/1‑99 (MQ=255) ccTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAgcgcgc < 2:1481160/150‑1 (MQ=255) cTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGcgcc > 1:1689863/1‑150 (MQ=255) cAAGACCGACTCCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCATTCAGCTGCACCTTGTTCAGCTTTCAGACAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGcgcccgagt < 1:1475621/150‑4 (MQ=255) aaGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGc < 1:1273160/99‑1 (MQ=255) aaGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGc > 2:1273160/1‑99 (MQ=255) aaGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGagcagc < 1:2163571/139‑1 (MQ=255) aaGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGagcagc > 2:2163571/1‑139 (MQ=255) aaGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGccac > 1:1050108/1‑150 (MQ=255) gACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGccacca > 1:35602/1‑150 (MQ=255) gACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCAAT‑GGAATCAGACCCGCCTGGAGCTGGAGAGCCTCTCCAATTCGGGCGACGAGCAGCGCGCCCGccacca < 1:1993464/150‑1 (MQ=255) cacacCCACCGTCCCCTGCTTGACGAGTAGGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAgctg < 2:231625/149‑1 (MQ=255) ccaccGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAgcgc > 2:1523553/1‑103 (MQ=255) ccaccGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAgcgc < 1:1523553/103‑1 (MQ=255) ccaccGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCg > 1:1208421/1‑115 (MQ=255) ccaccGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAg > 1:1517007/1‑150 (MQ=255) ccaccGTCGCCTGCTTGACGAGTATGCCCGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCg < 2:1208421/115‑1 (MQ=255) accGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGtt > 2:387070/1‑150 (MQ=255) ccGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTa > 1:2246334/1‑150 (MQ=255) cGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGCCCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTAc < 2:2307650/150‑1 (MQ=255) cGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTAc < 1:2365186/150‑1 (MQ=255) ccTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCt > 1:1186803/1‑150 (MQ=255) tGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTgg > 1:651152/1‑150 (MQ=255) cTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGa > 1:273565/1‑64 (MQ=255) cTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGgaa > 2:456007/1‑150 (MQ=255) aCGAGTATGCCGGCGCCGTCGACCTGGCCCGCCCGGTACAGC‑CCCCGCAACGTCCTGGGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAAc < 1:1742742/150‑1 (MQ=255) aCGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGgaagacc < 2:35602/150‑3 (MQ=255) gAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGTAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCATCTGGAAGAACTg > 1:1075365/1‑150 (MQ=255) gAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTg > 1:1168197/1‑150 (MQ=255) gTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGa < 1:1957999/150‑1 (MQ=255) aaTGCCGGCCCCTTCGGCCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGAc < 2:170600/149‑1 (MQ=255) cGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGgaa < 1:350968/136‑1 (MQ=255) cGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGgaa > 2:350968/1‑136 (MQ=255) tgtaCCTGGCGGGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCggg < 2:2397146/79‑1 (MQ=255) tgtaCCTGGCGGGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCggg > 1:2397146/4‑82 (MQ=255) tgtaCCTGGCGGGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTgg > 1:218136/4‑150 (MQ=255) tCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTgg < 1:293332/150‑1 (MQ=255) tCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTgg > 1:1961014/1‑150 (MQ=255) cGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTggg < 2:651152/150‑1 (MQ=255) taCCTGGCGGGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGc > 2:844831/2‑150 (MQ=255) ccTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGCGa < 1:2140423/150‑1 (MQ=255) cTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGCGAg > 2:1414669/1‑150 (MQ=255) ggCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGcgcccg < 2:2342622/93‑1 (MQ=255) ggCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGcgcccg > 1:2342622/1‑93 (MQ=255) ggCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACGGGACAACCTCGGCCTGGGCGAGCa < 1:951694/150‑1 (MQ=255) gCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGATCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGCGAGCAc < 2:1483703/150‑1 (MQ=255) gCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCAGGAAGTATTCGGCAACGTCTTCCTGGGCGAGCaa > 1:1108769/1‑149 (MQ=255) gCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCATGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGCGAGCAc < 1:2091974/150‑1 (MQ=255) ccGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGgcac > 1:1280243/1‑94 (MQ=255) ccGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGCGAGCACGa > 2:2133687/1‑150 (MQ=255) | ATCAACGGCACGCCCTGCCCGCTCGGCGACCTCAAGGCGCTGGGCGAACTGCTGATCGATATCCACAGCCAGCACGAGCACCAGTCCCTGCTCAAGACCGACACCCACCGTCGCCTGCTTGACGAGTATGCCGGCGCCGTCGACCTGGCCCGCCAGGTACAGCTTGCAGCCAAGCGCT‑GGAATCAGACCCGCCTGGAGCTGGAGCGCCTCTCCAACTCGGGCGACGAGCAGCGCGCCCGCCACCAGCTGCTCAGTTACCAGCTGGAAGAACTGGACAACCTCGGCCTGGGCGAGCACGA > NC_002947/5378782‑5379080 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |