| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,389,315 | T→A | 8.0% | L926Q (CTG→CAG) | dld2 → | D‑lactate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,389,315 | 0 | T | A | 8.0% | 375.4 / 18.8 | 125 | L926Q (CTG→CAG) | dld2 | D‑lactate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (56/58); new base A (2/8); total (59/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
AGGCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCGGGTA > NC_002947/5389166‑5389464 | aGGCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCt < 2:105489/150‑1 (MQ=255) ggCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTg > 1:834252/1‑150 (MQ=255) gCTTTACCCCCCCCGGCTTGATCGCCCACTCGTTCGCCAGCCTGTAGGACGCGGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGACAGGCCTGTCGCGCCACCGCGGCATCGTCTTCCTCGTGGTGGTCTACCttg < 2:1970077/150‑3 (MQ=255) tttACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTa < 1:2119337/150‑1 (MQ=255) accaccCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCAGGTAGAc < 1:1724336/150‑1 (MQ=255) caccCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACcg > 2:2235572/1‑150 (MQ=255) caccCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCAGGTAGAcca < 2:204569/150‑2 (MQ=255) accCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCAGGTAGAccag < 1:2179684/150‑3 (MQ=255) cccccGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTCTTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACcgcg > 2:197824/1‑150 (MQ=255) cccccGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCAGGTAGAccagg < 2:2234944/150‑4 (MQ=255) ccccGAGCTGAACGCCCACTCGTTGTGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCCGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCGCGGTCTACCAGGTAGAccaggc < 2:901734/150‑5 (MQ=255) cccGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCCGGTCTACCAGGTAGAccaggcc < 2:1292625/150‑6 (MQ=255) tGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGc > 1:1122137/1‑150 (MQ=255) aaCGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTCCCTGGTAGACCGCGTCACCCGGCCa > 1:478670/1‑150 (MQ=255) aCGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCAc < 1:1548615/150‑1 (MQ=255) ccACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAg > 2:2269132/1‑150 (MQ=255) ccACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAg > 2:1409471/1‑150 (MQ=255) ccACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAg > 1:335505/1‑150 (MQ=255) ccctggTTGCCCAGCCTGAAGCACGCCGTGCATCATTGCAGGGATGGTGTTTCCTCCAGCCTCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGTCTCCCACGGCCTGGTCTACCTGGTAGACCGGGTCACCCGGCCACGCAGc < 2:14032/145‑1 (MQ=255) cACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGc < 1:1822122/150‑1 (MQ=255) gTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTa < 1:2029510/121‑1 (MQ=255) gTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTa > 2:2029510/1‑121 (MQ=255) gTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTa > 2:2341106/1‑150 (MQ=255) ttGCGGAGGGTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTaa < 2:740363/150‑1 (MQ=255) gcAGCCTGAAGGACGCCGTGAAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAAcgcg > 1:1212300/1‑150 (MQ=255) cTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGat > 1:1669748/1‑150 (MQ=255) aGGACGCCGTGCAGTATTGCAGCGAAGGTATCTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAg < 1:926070/150‑1 (MQ=255) cGCCGTGCAGTATTGCAGAAAAGGTATTTCCCCCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTgg < 2:1760353/150‑1 (MQ=255) cGCCGTGCAGTATGGCAGCGAAGGTATTTCCCCCAGCCGCACCTGCGAGATAGGCCCGTGGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTGGATATAGGTgg < 1:2233080/150‑1 (MQ=255) gCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTggg < 1:17847/150‑1 (MQ=255) tGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAgc > 2:1534542/1‑150 (MQ=255) gcggTAGTGCAGCGAAGGTATTGCCAGCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACTACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACCCAGCTTCTAACGCGTTGATATAGGTGGGGGgcg < 2:271649/147‑1 (MQ=255) tATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGc < 1:1409471/150‑1 (MQ=255) ttGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGt < 2:2038326/99‑1 (MQ=255) ttGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGc < 2:1237495/107‑1 (MQ=255) ttGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGc > 1:1237495/1‑107 (MQ=255) tGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCctc > 2:1727108/1‑117 (MQ=255) gCAGCGAAGGTATTTCCACCAGCCGCCCCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTTTACCTGGTAGACCGCGTCACCCGGCCAAGCAGCCTCTAACCCGTTGATATAGGTGGGGAGCGGTGCGTAg > 1:809095/1‑150 (MQ=255) cAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGt < 1:944928/123‑1 (MQ=255) cAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGt > 2:944928/1‑123 (MQ=255) aGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGa > 2:1029152/1‑150 (MQ=255) aGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCACTGCGTAGGa > 1:2335068/1‑150 (MQ=255) gCGAAGGTATTTCCACAAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAgc > 2:1941582/1‑138 (MQ=255) gCGAAGGTATTTCCACAAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAgc < 1:1941582/138‑1 (MQ=255) cGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGc < 2:1669748/150‑1 (MQ=255) aaGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCgg < 2:1388170/150‑1 (MQ=255) aaGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCgg > 1:1083836/1‑150 (MQ=255) acgTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGCCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCggg < 1:31488/148‑1 (MQ=255) aGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGACCCGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCggg < 2:929581/150‑1 (MQ=255) tttCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCggg < 2:1753039/145‑1 (MQ=255) tttCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCggg > 1:1753039/1‑145 (MQ=255) tCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTAccc < 2:2376443/150‑1 (MQ=255) caccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCcgc > 1:1477172/1‑150 (MQ=255) accaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCcgcg > 1:2260936/1‑150 (MQ=255) ccaGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGa > 2:821381/1‑150 (MQ=255) caGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGaa < 2:1477172/150‑1 (MQ=255) aGCCGCACCTGCGAGATAGGCCTGACGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGCTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGGTTACCCGCGAag > 2:381990/1‑150 (MQ=255) ccGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAagag < 2:40612/150‑1 (MQ=255) gCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGc < 2:813055/150‑1 (MQ=255) gCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGc < 1:197824/150‑1 (MQ=255) cccTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGACACGCAGCCTCCCCCACTTTGATATATGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg < 1:2127150/149‑1 (MQ=255) aCCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTCGCCAGCGTACACGGGCTACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg < 1:2122874/150‑1 (MQ=255) aCCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg < 2:2046810/150‑1 (MQ=255) aCCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg < 1:971968/150‑1 (MQ=255) aCCTGCGAGATAGGCCTGTCGAGACACAGCGGCATCGACTACCACGGCCTGGTCTACCAGGTAGAcca > 1:2286424/1‑67 (MQ=255) tGCGAGATAGGCCTGTTGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCgg < 1:122996/127‑1 (MQ=255) tGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTc < 1:790724/150‑1 (MQ=255) tAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTgg < 1:1029152/150‑1 (MQ=255) tAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTgg < 1:821381/150‑1 (MQ=255) aGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGc < 1:2235572/150‑1 (MQ=255) gCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTTGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCTCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCa < 2:1232206/150‑1 (MQ=255) gCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTgg < 1:945267/97‑1 (MQ=255) cTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAAt < 2:59638/150‑1 (MQ=255) tGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATc > 1:1006441/1‑150 (MQ=255) tGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATc < 2:1083836/150‑1 (MQ=255) tGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATc < 2:1122137/150‑1 (MQ=255) acaGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAagag > 1:2003480/1‑121 (MQ=255) aGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTg > 1:434838/1‑150 (MQ=255) cGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTc > 1:2250412/1‑150 (MQ=255) cATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg < 1:1458428/118‑1 (MQ=255) cATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCAc < 1:929491/150‑1 (MQ=255) cATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCAc < 2:2250412/150‑1 (MQ=255) tCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCg > 1:571166/1‑150 (MQ=255) tCGACTACCACGGCCTGGTCTACCGGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCg > 2:1627086/1‑150 (MQ=255) gACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCa > 1:754418/1‑150 (MQ=255) aCCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGGGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGcca < 1:2341106/150‑1 (MQ=255) ccACGGCCTGGTCTACCTGGTGGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGccac > 1:91340/1‑150 (MQ=255) cGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCcaccac < 1:1895684/150‑1 (MQ=255) gCCTGGTCTACATGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCg > 2:586260/1‑150 (MQ=255) gcggTCTACCAGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAaga < 2:931466/95‑1 (MQ=255) cTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTAc < 2:1147334/88‑1 (MQ=255) gTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg < 2:2415979/99‑1 (MQ=255) tACCTGGTAGACCGCGTCACCCGGCTACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTcgcg < 1:1698857/150‑1 (MQ=255) tACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg < 2:294070/96‑1 (MQ=255) tACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCg > 1:294070/1‑96 (MQ=255) tACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTgg > 2:911843/1‑106 (MQ=255) tACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCAc < 2:1339894/128‑1 (MQ=255) tACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCAc > 1:1339894/1‑128 (MQ=255) tACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTcgcg > 1:1930727/1‑150 (MQ=255) tGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTAGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCGGGTa > 1:1728808/1‑150 (MQ=255) | AGGCTTTACCACCCCCGAGCTGAACGCCCACTCGTTGCGCAGCCTGAAGGACGCCGTGCAGTATTGCAGCGAAGGTATTTCCACCAGCCGCACCTGCGAGATAGGCCTGTCGAGCCACAGCGGCATCGACTACCACGGCCTGGTCTACCTGGTAGACCGCGTCACCCGGCCACGCAGCCTCTAACGCGTTGATATAGGTGGGGAGCGCTGCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTCCTGCTGGCCAATCCCCACCCACTGTCCACCGCAGCCACCACCGCATTCGCGGGTA > NC_002947/5389166‑5389464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |