| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,546,502 | T→C | 13.5% | V10V (GTA→GTG) | rlmB ← | 23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,546,502 | 0 | T | C | 13.5% | 248.4 / 22.0 | 101 | V10V (GTA→GTG) | rlmB | 23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB |
| Reads supporting (aligned to +/- strand): ref base T (36/51); new base C (5/9); total (41/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 103 total aligned reads displayed.
TCTCACGGCGCTCGGCCTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGATTTGCTGCCAGCACTGCTGCG > NC_002947/5546354‑5546644 | tctcACGGCGCTCGGCCTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTa < 2:1576541/150‑1 (MQ=255) ctcACGGCGCTCGGCCTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTAc < 2:1329287/150‑1 (MQ=255) tcACGGCGCTCGGCCTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACg > 1:832003/1‑150 (MQ=255) gcTCGGCCTGGCCGACCTGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTACACGCCGtgca < 2:158168/150‑4 (MQ=255) gcTCGGCCTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTACACGCCGtgca < 2:902066/150‑4 (MQ=255) gcTCGGCCTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTACACGCCGtgca < 1:2316630/150‑4 (MQ=255) cTCGGCCTGGCCGGCCGGCACGCGGTTTTGAGCGCCATGAGCCGGAACAGTGTCGGGGCGTGCCGCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGAAGCAATGCCTGCACGTCTTACACGCCGtgcag < 2:2366301/150‑5 (MQ=255) cTCGGCCTGGCCGACCGGCACGCGCTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTACACGCCGtgcag < 2:1212083/150‑5 (MQ=255) tCGGCCTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGGTTCGAGGCGTGGCGCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCGGCAGCAATGCCTGCACGGCGTGTACGCCGTAGGt‑t > 2:853509/1‑150 (MQ=255) ccTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAt‑ttttt < 2:939663/150‑1 (MQ=255) ccTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAt‑ttttt > 1:939663/1‑150 (MQ=255) ccTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTACACGCCGtgcag < 1:1513762/145‑5 (MQ=255) ccTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTACACGCCGtgcag > 2:1513762/1‑141 (MQ=255) cTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTc < 2:569264/150‑1 (MQ=255) ggCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCa < 2:2171691/150‑1 (MQ=255) gCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAg < 1:1783841/150‑1 (MQ=255) ccGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGc < 1:1859784/150‑1 (MQ=255) cGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCt < 1:1822588/150‑1 (MQ=255) cGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCt > 2:765147/1‑150 (MQ=255) aCCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGa < 1:1673404/150‑1 (MQ=255) aCCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGa < 1:795085/150‑1 (MQ=255) cGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACt < 1:1521833/150‑1 (MQ=255) cACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCAt > 2:427975/1‑150 (MQ=255) cgGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAAt < 1:1032043/150‑1 (MQ=255) ggTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCg > 2:2099569/1‑122 (MQ=255) ggTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCg < 1:2099569/122‑1 (MQ=255) ggTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAAtt < 1:926463/150‑1 (MQ=255) tcccGCGGCCAGCGTCAGCAGGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTGGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGctc < 1:853509/148‑1 (MQ=255) cgcgGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTg > 1:2096621/1‑150 (MQ=255) gcgGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑t < 1:1776277/150‑1 (MQ=255) gcgccagcAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCg > 1:1448341/1‑150 (MQ=255) cgccagcAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑ttttttgcg > 2:166436/1‑146 (MQ=255) gccagcAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTg < 1:1214193/150‑1 (MQ=255) cagcAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGa < 1:561928/150‑1 (MQ=255) agcAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGCGGAg > 2:1181521/1‑150 (MQ=255) cAAGGTTTCGAGGGGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAgcg > 2:406155/1‑150 (MQ=255) cAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAgcg > 2:1236965/1‑150 (MQ=255) tttCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGa < 1:1270678/150‑1 (MQ=255) ttCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGAc < 2:832003/150‑1 (MQ=255) ttCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGAc > 2:2388182/1‑150 (MQ=255) gCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCCATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCCCTTG‑TTTTTTCGTGGAGCGCCGGACTGcggc > 2:419356/1‑150 (MQ=255) gTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTcggcg > 1:1694271/1‑149 (MQ=255) gTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTcggcg < 2:1694271/149‑1 (MQ=255) gTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGCACGCCGTAGAT‑TTTTTCTATACGTTTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTcggcgg < 1:1241375/150‑1 (MQ=255) gTGGCTCGCTGCGCCCTTCCGAAAGAAAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTcggcgg > 2:351061/1‑150 (MQ=255) cTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGa > 1:79625/1‑129 (MQ=255) cTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGa > 1:79240/1‑129 (MQ=255) cTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGa < 2:79240/129‑1 (MQ=255) cTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGa < 2:79625/129‑1 (MQ=255) tCGCTGCGCCCTTCCGACAGCCAGATGTTGTGGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCtt > 1:2276818/1‑150 (MQ=255) tCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCtt < 2:335820/150‑1 (MQ=255) gggccTTACGACGGCCAGTTCTGTTTGACCCGCTTTGGAGGTTGCTGGAGCAGTGCCTGCACGGTGTGTACGCCGTCGAT‑TGCTTCCAGCTGACTCGTGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGTGCCTTTCCGGt < 2:87405/147‑1 (MQ=255) cTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGGTGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCtt < 1:605195/150‑1 (MQ=255) ttCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAt‑t < 1:2410057/76‑1 (MQ=255) ttCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAt‑t > 2:2410057/1‑76 (MQ=255) tCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTgg < 2:452101/150‑1 (MQ=255) cGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTc < 1:1940681/150‑1 (MQ=255) cGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGCGCTTGGTc < 2:1908283/150‑1 (MQ=255) cAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGt > 1:2117355/1‑150 (MQ=255) gCCAGATCTGCTTTACCCGCCTTGGATGGTGCTGCAGCAAAGCCTGCACGGCGTGTACCCCTTACATCTATGTCGAAC‑ATCTCATGGAGTGCTCTTGTTTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGtt < 1:166436/150‑1 (MQ=255) gCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGttt < 1:765147/150‑1 (MQ=255) ccAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTcggcgg < 2:580916/125‑1 (MQ=255) ccAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTcggcgg > 1:580916/1‑125 (MQ=255) ccAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGtt < 2:1648405/148‑1 (MQ=255) ccAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGtt > 1:1648405/1‑148 (MQ=255) cAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCTTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGc > 2:1365185/1‑150 (MQ=255) aGATCTGCTTGTCCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGcc < 1:1642442/150‑1 (MQ=255) aGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTACACGCCGtgc > 2:2163971/1‑60 (MQ=38) aGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTACACGCCGtgc < 1:2163971/62‑3 (MQ=38) tGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGt < 1:2034904/129‑1 (MQ=255) tGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGt > 2:2034904/1‑129 (MQ=255) tGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCg < 2:2268834/146‑1 (MQ=255) tGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCg > 1:2268834/1‑146 (MQ=255) gCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGc > 2:1752441/1‑68 (MQ=255) gCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGc < 1:1752441/68‑1 (MQ=255) cTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGc > 1:185923/1‑150 (MQ=255) tGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCtt < 2:2276818/150‑1 (MQ=255) cGCTTTGGATGGTGCTGCAGCAATGCCTGCAGGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATGGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCAc < 2:1257440/150‑1 (MQ=255) cGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCAc < 2:1758329/150‑1 (MQ=255) gCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCAcc > 2:2304951/1‑150 (MQ=255) gATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTTTTTTTTTTTCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTtctc > 2:480206/1‑150 (MQ=255) gATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑CTTTTCCTGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTtctc > 2:1532753/1‑150 (MQ=255) ggTGTTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGATGGCTTGCCACCTTTCTCCGa < 1:351061/150‑1 (MQ=255) gTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGAt < 1:427975/150‑1 (MQ=255) tgctgcAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTCCGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGAtt < 2:1663585/150‑1 (MQ=255) gcagcaATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGATTtgct > 1:2249849/1‑150 (MQ=255) gcagcaATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGAAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGATTtgct < 1:1236965/150‑1 (MQ=255) cagcaATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGATTtgctg < 1:2082818/150‑1 (MQ=255) tGCCTGCACGGAGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTAGATCTCCAGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGATTTGCTGCCAGCa < 1:2388182/150‑1 (MQ=255) ccTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGAc > 1:1134118/1‑115 (MQ=255) ccTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATGGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGAc < 2:1134118/115‑1 (MQ=255) cTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGATTTGCTGCCAGCActg < 1:419356/150‑1 (MQ=255) tGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGATTTGCTGCCAGCActgc > 2:1766972/1‑150 (MQ=255) tatggCGTACACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCtt < 2:189196/113‑1 (MQ=255) taCGGCGTACACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGTTTGTCCGGACGGCTTGCCACCTTTCTCCGATTTGCTGCCAGCActgctg > 2:2275859/2‑150 (MQ=255) taCGGCGTACACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCtt > 1:189196/2‑116 (MQ=255) aCGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGATTTGCTGCCAGCACtgctgc < 2:262827/150‑1 (MQ=255) cGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGATTTGCTGCCAGCACTGCTgcg > 2:2359731/1‑150 (MQ=255) gtgtACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGttt < 2:487796/98‑1 (MQ=255) gtgtACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGttt > 1:487796/1‑98 (MQ=255) | TCTCACGGCGCTCGGCCTGGCCGACCGGCACGCGGTTTTCCGCGGCCAGCGCCAGCAAGGTTTCGAGGCGTGGCTCGCTGCGCCCTTCCGACAGCCAGATCTGCTTGACCCGCTTTGGATGGTGCTGCAGCAATGCCTGCACGGCGTGTACGCCGTAGAT‑TTTTTCCAGCTGACTCATGAATTGCTCTTG‑TTTTTGCGTGGAGCGCCGGACTTCGGCGGGCCTTTACGGTGCTTGGTCGGTTTGCCGGACGGCTTGCCACCTTTCTCCGATTTGCTGCCAGCACTGCTGCG > NC_002947/5546354‑5546644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |