| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,579,833 | C→G | 5.9% | V361V (GTG→GTC) | serB ← | phosphoserine phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,579,833 | 0 | C | G | 5.9% | 272.2 / 5.6 | 85 | V361V (GTG→GTC) | serB | phosphoserine phosphatase |
| Reads supporting (aligned to +/- strand): ref base C (39/41); new base G (3/2); total (42/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
CGATCACGCAGGCCCAGCAGGTACAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCACTTCAAGTTCGTTGGCGAACACATAG > NC_002947/5579684‑5579980 | cgATCACGCAGGCCCAGCAGGTACAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGccc > 2:1838454/1‑150 (MQ=255) gCAGGCCCAGCATGTACAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCCGCCAGCGACAGCATCGGCAGGTCATTGGCGCCAGCGCCCACGGCGa < 2:242176/150‑1 (MQ=255) gCCCAGCAGGTACAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCGGGGGCGATggc < 2:746540/150‑2 (MQ=255) cccAGCAGGTACAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGAACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTc < 1:1352814/150‑1 (MQ=255) cagcagGTACAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTg > 2:1850934/1‑150 (MQ=255) agGTACAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATg > 1:1922286/1‑141 (MQ=255) agGTACAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATg < 2:1922286/141‑1 (MQ=255) gTACAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGATCTGCTCCAg < 2:2402735/150‑1 (MQ=255) aCAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCATGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGtt > 2:1412165/1‑150 (MQ=255) aGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGc > 1:2306634/1‑150 (MQ=255) cACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCaa > 1:1325343/1‑150 (MQ=255) ccccGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGc < 2:2320816/150‑1 (MQ=255) ccccGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGc > 2:262875/1‑150 (MQ=255) cccGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATg < 1:2268550/130‑1 (MQ=255) cccGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATg > 2:2268550/1‑130 (MQ=255) cccGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGcc > 2:2437968/1‑150 (MQ=255) cccGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCACCATCGCCGTGGGCGATggcgccaa > 2:492180/1‑131 (MQ=255) gTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACGAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTtc < 1:135577/150‑1 (MQ=255) gCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGc > 2:1530313/1‑150 (MQ=255) cccAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTg > 2:2188457/1‑150 (MQ=255) ccAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTgg > 2:1040352/1‑150 (MQ=255) aTCGCCTGCTTGGCCGACTGGCGCACCAGCGGGTCGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCttcttc < 1:1163323/150‑1 (MQ=255) aTCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGGCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGTCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCttcttc < 1:2367518/150‑1 (MQ=255) aTCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCttcttc < 1:2015000/150‑1 (MQ=255) aTCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCttcttc < 2:1586668/150‑1 (MQ=255) ccTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTcaaca > 1:590824/1‑150 (MQ=255) cTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATc < 1:1765809/150‑1 (MQ=255) gCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGcc < 2:1521584/150‑1 (MQ=255) ccGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCt > 1:790750/1‑150 (MQ=255) gACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTg > 2:1523592/1‑150 (MQ=255) cgcACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTgg < 2:286822/150‑1 (MQ=255) ccAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTg > 2:2319382/1‑113 (MQ=255) ccAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTg < 1:2319382/113‑1 (MQ=255) cAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATc < 1:1040352/150‑1 (MQ=255) cAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATc > 1:1290632/1‑150 (MQ=255) gCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTcaa > 2:400000/1‑124 (MQ=255) gCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTcaa < 1:400000/124‑1 (MQ=255) gCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACaa < 1:1850934/150‑1 (MQ=255) cTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAAt < 1:1412165/150‑1 (MQ=255) ttGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCGACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGa < 2:1937095/145‑1 (MQ=255) ttGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCGACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGa > 1:1937095/1‑145 (MQ=255) ttGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATc > 2:1987795/1‑150 (MQ=255) gCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTc < 2:2074271/80‑1 (MQ=255) gCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTc > 1:2074271/1‑80 (MQ=255) gCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGc > 2:2008837/1‑150 (MQ=255) cACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCt < 2:877094/150‑1 (MQ=255) cACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCCTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCt > 1:1996472/1‑150 (MQ=255) gAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCaa < 1:2437968/150‑1 (MQ=255) gAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCaa > 1:393966/1‑150 (MQ=255) aaaCGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAAc > 1:1177787/1‑150 (MQ=255) aaaCGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAAc < 1:1044337/150‑1 (MQ=255) gccacgccCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGcc < 1:1530313/150‑1 (MQ=255) cacnccCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCGTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCAc > 2:1520375/1‑150 (MQ=255) cacgccCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCAc > 1:1394220/1‑150 (MQ=255) cgccCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGc < 1:2188457/150‑1 (MQ=255) ccAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGa < 2:2351056/126‑1 (MQ=255) ccAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGa > 1:2351056/1‑126 (MQ=255) ccAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCg > 2:961225/1‑150 (MQ=255) aaCCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGc < 1:1491340/119‑1 (MQ=255) aaCCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGc > 2:1491340/1‑119 (MQ=255) aaCCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTc > 1:1572283/1‑150 (MQ=255) aaCCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCAGTc < 2:590824/150‑1 (MQ=255) cagccagcGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGTCATCGACAATCGGCTCAACAGCCACGCCCGTCACCt > 1:2440541/1‑150 (MQ=255) agcGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCa > 1:1032436/1‑150 (MQ=255) gcGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCAt > 2:1065848/1‑150 (MQ=255) cGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATc < 1:240017/150‑1 (MQ=255) gACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGACCTTTCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATc < 2:1327237/149‑1 (MQ=255) gACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGACCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATc > 1:1327237/1‑149 (MQ=255) cAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGAc < 2:790750/150‑1 (MQ=255) gCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCa < 1:961225/150‑1 (MQ=255) cATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCAc > 2:1522381/1‑150 (MQ=255) aTCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTtc > 1:552153/1‑59 (MQ=255) aTCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTtc < 2:552153/59‑1 (MQ=255) gCAGGTCATTGGCGCCATCGCCCACGGGGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATc < 2:678560/100‑1 (MQ=255) gCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATc > 1:678560/1‑100 (MQ=255) gCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCCTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCACTTCaa < 2:1996472/150‑1 (MQ=255) gTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCACTTCAAGTTc < 1:1520375/150‑1 (MQ=255) tCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCACTTCAAGTTCg > 1:1152356/1‑150 (MQ=255) aTTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCACTTCAAGTTCGtt < 2:1032436/150‑1 (MQ=255) ttGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCgg > 1:1883948/1‑76 (MQ=255) ttGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCgg < 2:1883948/76‑1 (MQ=255) ttGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCt > 1:698899/1‑103 (MQ=255) ttGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCt < 2:698899/103‑1 (MQ=255) agaccATCGCCGTGGGCGATGGCCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAAc > 1:1790963/4‑104 (MQ=255) ccATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCACTTCAAGTTCGTTGGCGAac < 2:1549780/150‑1 (MQ=255) ccATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTAACGGTCGACCACTTCAAGTTCGTTGGCGAac < 1:665943/150‑1 (MQ=255) cccACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCACTTCACGTTCGTTGGCGAACACATAg > 1:2283995/1‑150 (MQ=255) ccACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCACTTCaa < 1:1711603/129‑1 (MQ=255) ccACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCACTTCaa > 2:1711603/1‑129 (MQ=255) | CGATCACGCAGGCCCAGCAGGTACAGCACCCCGTCCAGCCCCAAGGTGGAAATCGCCTGCTTGGCCGACTGGCGCACCAGCGGCTTGGCACGAAACGCCACGCCCAACCCAGCCAGCGACAGCATCGGCAGGTCATTGGCGCCATCGCCCACGGCGATGGTCTGCTCCAGTTGCAAGCCTTCGTCGCTGGCCAGCTTCTTCAACAAATCGGCCTTGCGCTGGGCATCGACAATCGGCTCAACAGCCACGCCCGTCACCTTGCCATCGACCACTTCAAGTTCGTTGGCGAACACATAG > NC_002947/5579684‑5579980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |