| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,670,514 | T→C | 5.9% | intergenic (+52/‑33) | metF → / → PP_4978 | 5,10‑methylenetetrahydrofolate reductase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,670,514 | 0 | T | C | 5.9% | 305.7 / 5.0 | 101 | intergenic (+52/‑33) | metF/PP_4978 | 5,10‑methylenetetrahydrofolate reductase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (48/47); new base C (3/3); total (51/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
AGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCTCGCCCAGCTA > NC_002947/5670365‑5670663 | aGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACt > 1:2293381/1‑150 (MQ=255)aGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACt > 2:461982/1‑150 (MQ=255)aGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTATATACCTTGAACCAGGCTGAGCGAAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACt < 1:1843981/150‑1 (MQ=255) gTTGCAAGGCGGCGCGCCAGGCCAGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAg > 2:1195696/1‑150 (MQ=255) ttGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑c > 2:859677/1‑150 (MQ=255) gCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCt > 2:1898538/1‑150 (MQ=255) cAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCtt < 1:1006131/150‑1 (MQ=255) ggcggcGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGGAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTAtt > 2:736212/1‑150 (MQ=255) ggcggcGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTAGTCTAT‑GACCAAAG‑CCTTaat < 2:539878/150‑3 (MQ=255) ggcgCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGGAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCAt < 1:736212/150‑1 (MQ=255) ggcgCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCAt < 2:204556/150‑1 (MQ=255) cgcgcCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGAACTGGAACAACCTGTAGCCGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGAATAAGGCTTTAGTC‑TATGACCAAAG‑CCTTAATCAttt < 2:1301857/150‑1 (MQ=37) ccAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCgg > 2:280365/1‑150 (MQ=255) ccAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCgg < 1:2149068/150‑1 (MQ=255) aGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGt < 2:255852/150‑1 (MQ=255) aGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGt > 1:1271970/1‑150 (MQ=255) cTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGttgag < 1:461982/150‑4 (MQ=255) tGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAAc > 1:2237124/1‑150 (MQ=255) gCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACa < 1:561725/150‑1 (MQ=255) cACTTCTATACCTTGAACCAGGCTGAACCGAGCCTTGCGATCTGGAACAACCTGAAGTTGCCGTGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGTCCTTGTTTATA‑GACTAGAG‑TCTTAGTCATTTTCGGTTTAAATAg < 2:1698897/150‑1 (MQ=255) cACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAg < 1:806375/150‑1 (MQ=255) cTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGt < 2:2427563/150‑1 (MQ=255) tataCCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCTGGTTAAACAGGTCTtg < 1:1146399/150‑1 (MQ=255) tataCCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTtg > 1:556123/1‑150 (MQ=255) ataCCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTtgc < 2:1768173/150‑1 (MQ=255) aCCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGACGATTGTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTtgcct < 1:1204192/150‑1 (MQ=255) aCCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTtgcct > 2:8205/1‑150 (MQ=255) aCCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGAATAAGGCTTTAGTCTAT‑GACCAAAG‑CCTTAATCAtttc > 2:1245838/1‑128 (MQ=37) aCCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGAATAAGGCTTTAGTC‑TATGACCAAAG‑CCTTAATCAtttc < 1:1245838/129‑2 (MQ=25) cTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCAt < 1:1505825/124‑1 (MQ=255) cTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCAt > 2:1505825/1‑124 (MQ=255) cTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTtgcctgc > 1:2320240/1‑150 (MQ=255) cTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CATTATTCATTTTCGGGTTAAACAGGTCCagcctgc > 2:1096689/1‑150 (MQ=255) ttGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTtgcctgcc > 1:2312068/1‑150 (MQ=255) CAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATgcag > 1:815775‑M1/1‑150 (MQ=255) GCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTa > 2:1386583‑M1/1‑109 (MQ=255) GCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTa < 1:1386583‑M1/109‑1 (MQ=255) TGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCacac > 2:380891‑M1/1‑150 (MQ=255) ccGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCaa > 2:1627448/1‑150 (MQ=255) ccGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCaa > 1:1547159/1‑150 (MQ=255) cGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAAc > 2:143697/1‑150 (MQ=255) gAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTtg > 1:939583/1‑127 (MQ=255) aTCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCca < 1:2217403/150‑1 (MQ=255) tGGAACAAGCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAg > 2:1602739/1‑150 (MQ=255) aacaacCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAAcc > 2:1599227/1‑134 (MQ=255) aacaacCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAAcc < 1:1599227/134‑1 (MQ=255) aacaacCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCtt < 2:1110809/150‑1 (MQ=255) aacaacCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCtt < 2:1756057/150‑1 (MQ=255) caacCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGt > 2:1688098/1‑150 (MQ=255) ccTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGt > 1:1927527/1‑147 (MQ=255) ccTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGt < 2:1927527/147‑1 (MQ=255) cTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATAc < 1:1627448/150‑1 (MQ=255) cTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATAc > 2:1171725/1‑150 (MQ=255) gAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCt < 1:1195696/150‑1 (MQ=255) gAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCt > 2:1300598/1‑150 (MQ=255) gAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGt > 2:1304132/1‑76 (MQ=255) gAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGt < 1:1304132/76‑1 (MQ=255) gAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATgcagca > 1:1326013/1‑103 (MQ=255) gAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATgcagca < 2:1326013/103‑1 (MQ=255) aaaTCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGc > 1:2130198/1‑150 (MQ=255) aaaTCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGc > 1:2415216/1‑150 (MQ=255) aaaTCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGc > 1:1559138/1‑150 (MQ=255) aTCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCaa > 2:285827/1‑150 (MQ=255) aTCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCaa > 1:1851581/1‑150 (MQ=255) tCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAAc < 1:1688098/150‑1 (MQ=255) ttttGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCt > 1:1103374/1‑150 (MQ=255) ttttGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCAGGCTTTTGGCCCGGCAACCt > 1:1138806/1‑150 (MQ=255) ttGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTTGCTTTTGGCCCGGCAACCTAc < 2:1845855/150‑1 (MQ=255) ttGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTAc < 2:1559138/150‑1 (MQ=255) tGGCAAAGTCTGCTTAAGAAATGCTTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTAcc < 2:556123/150‑1 (MQ=255) ggCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCa > 2:2194977/1‑150 (MQ=255) ggCAAAGTCTGCTTAAGAAATGATTAACGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCCACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCa < 2:1271970/150‑1 (MQ=255) gCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCAt < 1:1869874/150‑1 (MQ=255) aaaGTCTGCTTAAGAAATGATTAAGGCTTTGGTCAAA‑GAATAAAGAAATCACTGA‑TCACAAAACAAACAGTGGTTGCCTGCCATGCCGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCa < 1:280365/150‑1 (MQ=255) aaaGTCTGCTTAAGAAATGATTAAGGCTTTGGTAAAA‑AACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTATTGCATGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCa > 1:190093/1‑150 (MQ=255) aaGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAg > 2:2082621/1‑150 (MQ=255) ttAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTg > 1:936183/1‑150 (MQ=255) ttAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTg < 1:2194977/150‑1 (MQ=255) ttAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTg > 1:318726/1‑150 (MQ=255) ttAAGAAATGATTAAGGCGTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTg > 1:1141160/1‑150 (MQ=255) tAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCttc < 1:1898538/150‑3 (MQ=255) aGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATgca < 2:1319573/75‑1 (MQ=255) aGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATgca > 1:1319573/1‑75 (MQ=255) aGAAATGATTAAGGCTTTGGTCATA‑GAATATAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCtt < 1:2671/150‑1 (MQ=255) aaaTGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCa > 2:2261135/1‑150 (MQ=255) aaaTGATTAACGCCATGGACATC‑GAATACAA‑CTTTATTAATTGTCGGGTGAAAGATTTCTTTCCTTCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCa > 2:1593886/1‑150 (MQ=255) aaTGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAg < 1:1096689/150‑1 (MQ=255) aaTGATTAAGGCGTTTGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACATCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAg < 2:549598/150‑1 (MQ=255) gATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCAt < 2:1138806/150‑1 (MQ=255) aTTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATc < 1:410696/150‑1 (MQ=255) ttAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGCATTTTCGCCGGGCCGCCGAGCAGCAGGAAGCCTGCTTCAGCATCg > 2:2092020/1‑150 (MQ=255) tAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGt < 1:8205/150‑1 (MQ=255) tAAGGCTTTAGTCTAT‑GACCAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCATCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGTCAACCTACCATCAGGAAGCCTGCTTCAGCATCGt > 2:102796/1‑150 (MQ=255) aGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCa < 2:226207/150‑1 (MQ=255) ggCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAg < 2:2320240/150‑1 (MQ=255) cATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCTCGc < 1:1300598/150‑1 (MQ=255) tatgACCAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCt > 1:505587/4‑89 (MQ=255) cTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCTCGCCCAGCt < 1:1171725/150‑1 (MQ=255) tAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCTCGCCCAGCTa > 1:1313561/1‑150 (MQ=255) tAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCTCGCCCAGCTa < 2:1547159/150‑1 (MQ=255) | AGCTGTTGCAAGGCGGCGCGCCAGGCCTGCACTTCTATACCTTGAACCAGGCTGAACCGAGCCTGGCGATCTGGAACAACCTGAAGCTGCCGCGCTGAAATCTTTTGGCAAAGTCTGCTTAAGAAATGATTAAGGCTTTGGTCATA‑GACTAAAG‑CCTTATTCATTTTCGGGTTAAACAGGTCTTGCCTGCCATGCAGCACACCCAACCTTCGCGCCCACAGCTTGTATACCTGGCTTTTGGCCCGGCAACCTACCATCAGGAAGCCTGCTTCAGCATCGTCAGCGCCCTCGCCCAGCTA > NC_002947/5670365‑5670663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |