BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,799,020	G→T	5.1%	P300Q (CCA→CAA)	PP_5077 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,799,020	0	G	T	5.1%	309.9 / 2.8	98	P300Q (CCA→CAA)	PP_5077	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (50/43); new base T (2/3); total (52/46)
Fisher's exact test for biased strand distribution p-value = 6.63e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.96e-01

Only 100 of 102 total aligned reads displayed.

CCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCATGGTTGGTCGCTTG  >  NC_002947/5798871‑5799169

ccGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTg                                                                                                                                                        <  1:1197004/150‑1 (MQ=255)

       tccctcTTCTCCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAActg                                                                                                                                                 <  2:114096/150‑1 (MQ=255)

        ccctcTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAActgg                                                                                                                                                >  2:2201531/1‑150 (MQ=255)

         cctcTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCACATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAActggg                                                                                                                                               >  1:221562/1‑150 (MQ=255)

         cctcTTCACCCCCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCCACGAAATTGGATCTGGTGTGCCATATAACGCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAActggg                                                                                                                                               >  1:281778/1‑150 (MQ=255)

         ccgctTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGGCGAGCCAGAAAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAActggg                                                                                                                                               >  2:876781/4‑150 (MQ=255)

          ctctTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTTGCCActgggc                                                                                                                                              <  2:2042125/150‑1 (MQ=255)

             ttCACCCTAGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTTGCCActgggcgac                                                                                                                                           <  2:536598/150‑4 (MQ=255)

              tCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTAGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAActgggcctgg                                                                                                                                          <  1:622661/150‑1 (MQ=255)

                aCCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACCCGATGGCAGCACCCTGCTTGCCGGCGCCCAGTGGCAActgggcctgggc                                                                                                                                        >  1:367504/1‑150 (MQ=255)

                  ccTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAActgggc                                                                                                                                              <  1:1151963/142‑1 (MQ=255)

                  ccTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAActgggc                                                                                                                                              >  2:1151963/1‑142 (MQ=255)

                  ccTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCAACCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAg                                                                                                                                      >  1:1113261/1‑150 (MQ=255)

                  ccTCGCCCATCCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACAGGCTGCCACTGGCCAACCAGAGGCAGCGGCATTGGCTGGGACGAGGCAGAGGACTCGATGGCAGCACCCTCCTTGCCGTCGCCCAGTGGCACCTGGGCCTGCGCAg                                                                                                                                      >  2:317315/1‑150 (MQ=255)

                   cTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGc                                                                                                                                     <  2:563166/150‑1 (MQ=255)

                    tCGCCCATGCCTGCGGCTTGGGTCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCGGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCGCCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGcc                                                                                                                                    <  2:845221/150‑1 (MQ=255)

                        ccATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAActgggc                                                                                                                                              <  1:1053970/136‑1 (MQ=255)

                        ccATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAActgggc                                                                                                                                              >  2:1053970/1‑136 (MQ=255)

                        ccATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGgcg                                                                                                                                >  1:1737269/1‑150 (MQ=255)

                         cATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGgcgc                                                                                                                               >  2:5056/1‑150 (MQ=255)

                         cATGCCTGCGGATTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGgcgc                                                                                                                               >  2:1332060/1‑150 (MQ=255)

                          aTGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCt                                                                                                                              >  1:712920/1‑150 (MQ=255)

                           ctccTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTCCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCtt                                                                                                                             <  1:1203328/148‑1 (MQ=255)

                             ccTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCCGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCg                                                                                                                           >  1:337647/1‑150 (MQ=255)

                              cTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGATTGAACCGGCCAAGTGACGGCTGAGCTTGGGCAGCCGGCGCTTcag                                                                                                                          >  2:1203328/1‑148 (MQ=255)

                                  ggCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAgg                                                                                                                      <  2:1737269/150‑1 (MQ=255)

                                  ggCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAgg                                                                                                                      <  1:2431795/150‑1 (MQ=255)

                                     ttGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGc                                                                                                                   >  1:2400700/1‑150 (MQ=255)

                                        ggCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCtt                                                                                                                <  2:712920/150‑1 (MQ=255)

                                           cAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAggg                                                                                                                     >  2:1796355/1‑142 (MQ=255)

                                           cAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAggg                                                                                                                     <  1:1796355/142‑1 (MQ=255)

                                           cAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTc                                                                                                             >  1:1323847/1‑150 (MQ=255)

                                             gCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGc                                                                                                           >  1:568990/1‑150 (MQ=255)

                                               ggCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCt                                                                                                         <  2:898348/150‑1 (MQ=255)

                                               ggCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCt                                                                                                         <  1:1704171/150‑1 (MQ=255)

                                                gCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTTGCCActgg                                                                                                                                                >  1:1870095/1‑110 (MQ=255)

                                                gCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTTGCCActgg                                                                                                                                                <  2:1870095/110‑1 (MQ=255)

                                                gCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGACAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCtt                                                                                                        >  1:404470/1‑150 (MQ=255)

                                                  tCGGGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTc                                                                                                      <  2:281778/150‑1 (MQ=255)

                                                    gcgcATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCtt                                                                                                    >  1:58271/1‑150 (MQ=255)

                                                     cgcATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTg                                                                                                   <  1:2201531/150‑1 (MQ=255)

                                                     cgcATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTg                                                                                                   <  1:296805/150‑1 (MQ=255)

                                                     cgcACCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTg                                                                                                   <  1:108116/150‑1 (MQ=255)

                                                       cgtCACCGGCTTCGACTGCCCAACCAGTGGCAGCGGCATTGGATGGGTTGGGAACGAAAAATCGTGCGCACCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTggg                                                                                                 <  1:876781/148‑1 (MQ=255)

                                                         tCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCa                                                                                               >  1:1108879/1‑150 (MQ=255)

                                                          cACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCAt                                                                                              >  2:2347596/1‑150 (MQ=255)

                                                          cACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCAt                                                                                              <  2:306430/150‑1 (MQ=255)

                                                             cGGCTGCGACTGGCCAACCAGTGGGAGCGGCATTGGCCGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCaa                                                                                           >  2:1625851/1‑150 (MQ=255)

                                                             cGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCaa                                                                                           >  1:1641410/1‑150 (MQ=255)

                                                                 tGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATAcc                                                                                       >  2:1977648/1‑150 (MQ=255)

                                                                       tGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGACCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATACATACCGCGGcc                                                                                 >  1:159523/1‑150 (MQ=255)

                                                                         gCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTc                                                                                                                            >  2:1103459/1‑105 (MQ=255)

                                                                         gCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTc                                                                                                                            <  1:1103459/105‑1 (MQ=255)

                                                                         gCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑c                                                                              >  2:1142823/1‑150 (MQ=255)

                                                                             aCCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTg                                                                                                                                                        <  1:1334349/73‑1 (MQ=255)

                                                                             aCCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTg                                                                                                                                                        >  2:1334349/1‑73 (MQ=255)

                                                                             aCCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGACAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACg                                                                          <  2:404470/150‑1 (MQ=255)

                                                                                  tGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAAc                                                                     <  2:58271/150‑1 (MQ=255)

                                                                                    gCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCa                                                                   <  1:1536752/150‑1 (MQ=255)

                                                                                      aGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACg                                                                 >  2:1856898/1‑150 (MQ=255)

                                                                                      aGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACg                                                                 >  2:1856721/1‑150 (MQ=255)

                                                                                        cGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGAc                                                               <  1:2347596/150‑1 (MQ=255)

                                                                                          gCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGGGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGAATCAATACCGCGGCAGACCTCGG‑AACCACGACca                                                             >  2:1240213/1‑150 (MQ=255)

                                                                                                gCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCgg                                                       >  1:1349379/1‑150 (MQ=255)

                                                                                                 cTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACTGCGGCCG‑CAACGGCAACCACGACCACAGCGGa                                                      <  2:1478484/150‑1 (MQ=255)

                                                                                                 cTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGa                                                      <  2:1783738/150‑1 (MQ=255)

                                                                                                  tGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGAc                                                     >  2:1045987/1‑150 (MQ=255)

                                                                                                    ggACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAg                                                   >  1:1373680/1‑150 (MQ=255)

                                                                                                     gACTAGCCAGAGAACTCGATGGCAGCGCCCTGGTTGCCGTCGCTCAGTGGTAAGTGGGCCTGGGCAGACGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTGGGGCATGAATACCGCGGCCG‑CAACTGCACCCACGCCCACAGCGGACAgc                                                  <  2:215678/150‑1 (MQ=255)

                                                                                                       cGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATAcc                                                                                       >  1:514525/1‑112 (MQ=255)

                                                                                                       cGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATAcc                                                                                       <  2:514525/112‑1 (MQ=255)

                                                                                                        gAGCCAGAGAACTCGATGGCGGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGATGACCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCAAGACCACAGCGGACAGcgcg                                               >  1:1207524/1‑150 (MQ=255)

                                                                                                         aGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGa                                              <  2:1108879/150‑1 (MQ=255)

                                                                                                         aGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGa                                              <  2:1113261/150‑1 (MQ=255)

                                                                                                          gCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAg                                             >  2:379507/1‑150 (MQ=255)

                                                                                                          gCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAg                                             >  2:2316160/1‑150 (MQ=255)

                                                                                                           ccAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCATGGGCAGCAGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATAAATACAGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGc                                            >  1:727475/1‑150 (MQ=255)

                                                                                                                 aaCTCGATGGCAGCGCCCGGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGCGCAGACGGCGCTTAGCACGCGGCCATCTCTCCTGTGTTTGTCATCGATGCCCCGGCGG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGt                                      <  2:2101858/150‑1 (MQ=255)

                                                                                                                 aaCTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACGGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGt                                      <  2:963417/150‑1 (MQ=255)

                                                                                                                    tCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGtttt                                   >  1:2128867/1‑150 (MQ=255)

                                                                                                                       aTGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTa                                <  1:1045987/150‑1 (MQ=255)

                                                                                                                         ggCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAgg                              <  1:1977648/150‑1 (MQ=255)

                                                                                                                            agcaCCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCAt                           >  2:1944600/1‑150 (MQ=255)

                                                                                                                            agcaCCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCAt                           <  2:2128867/150‑1 (MQ=255)

                                                                                                                                cccTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATa                                                                                         >  2:49407/1‑85 (MQ=255)

                                                                                                                                cccTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATa                                                                                         <  1:49407/85‑1 (MQ=255)

                                                                                                                                 ccTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAAAGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGa                      >  1:745361/1‑150 (MQ=255)

                                                                                                                                  cTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGaa                     >  1:849085/1‑150 (MQ=255)

                                                                                                                                      ttGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAAcccc                 >  2:127987/1‑150 (MQ=255)

                                                                                                                                       tGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCa                <  1:1442649/150‑1 (MQ=255)

                                                                                                                                         cccaggCCCAGTTGCCACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCAtg              >  1:1454467/6‑150 (MQ=255)

                                                                                                                                            tCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGCCCACAGCGGACAGCGCGAGCCCATGTTTCTTAGGCATCTTGAACCCCAtggtt           <  2:31730/150‑1 (MQ=255)

                                                                                                                                             cGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCAtggttg          <  2:1323847/150‑1 (MQ=255)

                                                                                                                                              gCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCAtggttgg         <  1:342395/150‑1 (MQ=255)

                                                                                                                                              gCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCAtggttgg         <  1:1954692/150‑1 (MQ=255)

                                                                                                                                                 cAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCACATGGTTGGTCg      >  1:1237268/1‑150 (MQ=255)

                                                                                                                                                   gTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCATGGTTGGTCGCt    >  2:2205427/1‑150 (MQ=255)

                                                                                                                                                    tGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCATGGTTGGTCGCtt   >  2:284415/1‑150 (MQ=255)

                                                                                                                                                    tGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCAGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCATGGTTGGTCGCtt   <  2:337647/150‑1 (MQ=255)

                                                                                                                                                     ggCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCATGGTTGGTCGCTTg  <  2:2400700/150‑1 (MQ=255)

CCGGGCCTCCCTCTTCACCCTCGCCCATGCCTGCGGCTTGGGCCAGCGGCTCGCGCATCACCGGCTGCGACTGGCCAACCAGTGGCAGCGGCATTGGCTGGGACGAGCCAGAGAACTCGATGGCAGCACCCTGCTTGCCGTCGCCCAGTGGCAACTGGGCCTGGGCAGCCGGCGCTTCGGCAGGGGCCTTGTCGCCTTTCTTGGGCATCAATACCGCGGCCG‑CAACGGCAACCACGACCACAGCGGACAGCGCGAGCACATGTTTTTTAGGCATCTTGAACCCCATGGTTGGTCGCTTG  >  NC_002947/5798871‑5799169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`