| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,815,587 | C→T | 5.2% | intergenic (+15/+76) | PP_5090 → / ← PP_5091 | cell division protein/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,815,587 | 0 | C | T | 5.2% | 345.6 / 5.8 | 114 | intergenic (+15/+76) | PP_5090/PP_5091 | cell division protein/membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (52/56); new base T (4/2); total (56/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
AAGGATGAAACCTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCCCACCAG > NC_002947/5815441‑5815734 | aaGGATGAAACCTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGc > 1:1081408/1‑150 (MQ=255) aaaCCTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATg > 2:826250/1‑150 (MQ=255) aaCCTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATg > 2:956848/1‑149 (MQ=255) aaCCTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGc < 1:1087420/150‑1 (MQ=255) cTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGCAGAAGGCCTTGC‑CGCAGCGATGCGAc > 2:1139626/1‑150 (MQ=255) gTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAg < 1:1246128/150‑1 (MQ=255) ccGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACGGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGcc > 1:944860/1‑150 (MQ=255) ccGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGcc > 1:983543/1‑150 (MQ=255) gCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCttt < 2:535720/150‑1 (MQ=255) ggTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTTTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTtata < 1:156400/150‑1 (MQ=255) ggTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTtata < 1:596756/150‑1 (MQ=255) gTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTatat < 1:2002898/150‑1 (MQ=255) gCCGTTCAGCAACCGAGAGAAGTTGAGAGGGGAACAGAAGCAGCTGGCTGGGGCCGGGGTCAGCAACCTGTTGCTGCAACAGCGGCCGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGAGACAAGGCCTTCTTTATATGGACa > 2:1206921/1‑150 (MQ=255) ttCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCATGAACCAAGAAGGCCTGGC‑CGCATCGACCCGACAACGCCTTCTTTATATTGACAGGAt > 2:1084541/1‑150 (MQ=255) cAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGccc > 2:2005788/1‑150 (MQ=255) aaCCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCg < 2:2267565/150‑1 (MQ=255) aaCCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGATAGACCCGTCAGTAACGACGCAAGACTTACTAAGATCG‑GGCGACAAAGCCTTCTTTATATGGACAGCATTGcctg > 1:533138/1‑148 (MQ=255) aCCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGt < 2:1868412/150‑1 (MQ=255) cgAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGc > 2:257398/1‑119 (MQ=255) cgAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGc < 1:257398/119‑1 (MQ=255) cgAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAg > 2:2238014/1‑150 (MQ=255) gcggTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAgggg < 1:2003289/147‑1 (MQ=255) gTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTg > 2:650588/1‑150 (MQ=255) gTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTg < 2:815880/150‑1 (MQ=255) ttGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGt > 2:37975/1‑150 (MQ=255) aCAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTaaa > 2:792896/1‑150 (MQ=255) aGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAagc < 2:2159447/150‑1 (MQ=255) gggCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAagcag > 2:800672/1‑150 (MQ=255) gggCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAagcag < 1:826250/150‑1 (MQ=255) ggCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAagcagc < 2:1713878/150‑1 (MQ=255) ggCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAagcagc < 1:37975/150‑1 (MQ=255) gCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCcttct < 2:1395641/108‑1 (MQ=255) gCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCcttct > 1:1395641/1‑108 (MQ=255) aGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGc < 1:1084541/150‑1 (MQ=255) gAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTtata > 2:568910/1‑108 (MQ=255) gAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTtata < 1:568910/108‑1 (MQ=255) tggctggGGCCGGGTTCAGCAACCTGTTACCTCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAg > 1:1638941/1‑150 (MQ=255) ggctggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAgc < 1:792896/150‑1 (MQ=255) gctggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTatat < 1:2232192/99‑1 (MQ=255) gctggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTatat > 2:2232192/1‑99 (MQ=255) gctggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAgcc > 2:938888/1‑150 (MQ=255) tggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGAc > 1:2448902/1‑81 (MQ=255) tggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGAc < 2:2448902/81‑1 (MQ=255) tggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGc < 2:2409371/121‑1 (MQ=255) tggGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGc > 1:2409371/1‑121 (MQ=255) ccGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAgccccgcccc > 1:1397111/1‑150 (MQ=255) gTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCAt < 1:938888/150‑1 (MQ=255) tCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTTCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTc < 2:1081408/150‑1 (MQ=255) cAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑AGAGGCAACGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCTGCCCCGCCCCGCATTCCttt < 1:1206921/150‑1 (MQ=255) cTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCTTTTCGGa < 1:1895845/150‑1 (MQ=255) ttGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCGGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGacac < 1:2005788/150‑1 (MQ=255) tgcAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTgg > 2:283540/1‑150 (MQ=255) tgcAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTgg < 2:944860/150‑1 (MQ=255) gcAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGc > 2:431508/1‑150 (MQ=255) cAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCt > 1:1610824/1‑150 (MQ=255) aGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTc > 2:224694/1‑150 (MQ=255) aGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTc < 1:549873/150‑1 (MQ=255) aGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTc > 2:1558362/1‑150 (MQ=255) gCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCa > 1:617834/1‑150 (MQ=255) ggCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGc < 2:433891/86‑1 (MQ=255) ggCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGc > 1:433891/1‑86 (MQ=255) gCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAgg < 1:696890/82‑1 (MQ=255) gCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACg > 1:1099142/1‑150 (MQ=255) cAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGt < 2:1893255/143‑1 (MQ=255) cAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGt > 1:1893255/1‑143 (MQ=255) cAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGt < 1:224694/150‑1 (MQ=255) aGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTc < 1:431508/150‑1 (MQ=255) gACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAgggg < 2:378758/81‑1 (MQ=255) gACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAgggg > 1:378758/1‑81 (MQ=255) gACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAgc > 1:1961118/1‑108 (MQ=255) gACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAgc < 2:1961118/108‑1 (MQ=255) aCCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCa < 2:2054708/150‑1 (MQ=255) ccgatctAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGaa < 2:645634/144‑1 (MQ=255) gTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAg < 1:1139626/150‑1 (MQ=255) atataaagaagGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATa > 1:365225/6‑150 (MQ=255) aaCGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATAc < 1:800672/150‑1 (MQ=255) aaCGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATAc < 2:1638941/150‑1 (MQ=255) aCGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACa < 1:1558362/150‑1 (MQ=255) aCGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGCACTACACTCTTCAGGCACCACTCTCCATGAATATGCTTGAAAGTAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCGTTCGGACACCTGGCTGGTCAACGTCCAGAAgagatcgg > 1:645634/1‑143 (MQ=255) cGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTc < 2:2308753/114‑1 (MQ=255) cGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTc > 1:2308753/1‑114 (MQ=255) gaagaaGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGc < 2:1099142/150‑1 (MQ=255) agaagGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCAt < 2:1837677/143‑1 (MQ=255) agaagGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCAc < 2:687622/150‑1 (MQ=255) gaagGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCAcc < 1:2238014/150‑1 (MQ=255) tctccTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGATGCGCAACGTCCAGAAGTCATACAGCAcccc < 1:664552/147‑1 (MQ=255) ggCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAagca < 1:1033760/71‑1 (MQ=255) ggCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAagca > 2:1033760/1‑71 (MQ=255) gCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCcca > 2:1555468/1‑150 (MQ=255) cTTGT‑CGCATCGCTGCGGCAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGcccc > 2:2065784/1‑73 (MQ=25) cTTGT‑CGCATCGCTGCGGCAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGcccc < 1:2065784/73‑1 (MQ=25) cTTGT‑CGCATCGCTGCGGCAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCg > 2:6275/1‑105 (MQ=38) cTTGT‑CGCATCGCTGCGGCAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCg < 1:6275/105‑1 (MQ=38) cTTGT‑CGCATCGCTGCGGCAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacc > 1:332676/1‑150 (MQ=255) cTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGGCTTCCCCCGGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccaga > 2:664552/1‑148 (MQ=255) cTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacc > 2:361401/1‑150 (MQ=255) cTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacc > 1:33755/1‑150 (MQ=255) cTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacc > 1:176416/1‑150 (MQ=255) ttGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCccacca > 2:2031762/1‑150 (MQ=255) tGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCCCACCAg < 2:33755/150‑1 (MQ=255) | AAGGATGAAACCTGGTACCGCGTGCTGGTTGGGCCGTTCAGCAACCGCGAGCAGTTGACAGGGGCACAGAAGCAGCTGGCTGGGGCCGGGTTCAGCAACCTGTTGCTGCAACAGCGGCAGACCCGTCAGTAACGAAGAAGGCCTTGC‑CGCAGCGATGCGACAAGGCCTTCTTTATATGGACAGCATTGCCCGTGAAGGGGCTGTAAAGCAGCCCCGCCACCGTCAGCCCCGCCCCGCATTCCTTTCGGACACCTGGCTGTTCAACGTCCAGAAGTCATACAGCACCCCCACCAG > NC_002947/5815441‑5815734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |