Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,843,556 | G→C | 5.8% | G41A (GGC→GCC) | PP_5122 → | GMC family oxidoreductase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,843,556 | 0 | G | C | 5.8% | 436.8 / 14.1 | 137 | G41A (GGC→GCC) | PP_5122 | GMC family oxidoreductase |
Reads supporting (aligned to +/- strand): ref base G (62/67); new base C (4/4); total (66/71) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 |
Only 100 of 145 total aligned reads displayed.
ATCTGAAAACAACAAGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCATGAGC > NC_002947/5843409‑5843704 | aTCTGAAAACAACAAGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCcggcg > 2:1046270/1‑150 (MQ=255) cTGAAAACAACAAGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCggcggc < 1:1836501/150‑1 (MQ=255) gAANACAACAAGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGAGCGGCAGTGGTGCCGGCGgcgc > 2:1504673/1‑150 (MQ=255) gAAAACAACAAGAGCATTGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGgcgc > 1:791523/1‑150 (MQ=255) caacaaGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGTCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGccacca > 1:820846/1‑150 (MQ=255) caacaaGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGccacca > 2:2175830/1‑150 (MQ=255) acaaGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGt > 1:763779/1‑150 (MQ=255) gagCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGTCAGTGGTGCCGGCGGCGCCACCAGTgcgc < 1:1046270/150‑1 (MQ=255) agCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCa < 1:1034560/150‑1 (MQ=255) agCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCa < 1:2428766/150‑1 (MQ=255) aTCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGAt < 2:1058330/150‑1 (MQ=255) cGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGc > 1:1447092/1‑150 (MQ=255) ccAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTc > 1:29115/1‑150 (MQ=255) aaTGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAg > 1:680790/1‑150 (MQ=255) aaTGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAg > 1:1805289/1‑150 (MQ=255) ccTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCt > 1:580857/1‑150 (MQ=255) cTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTg > 2:447966/1‑150 (MQ=255) cTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGAGAAGATGTTGTGCGCTg > 2:510682/1‑150 (MQ=255) tGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCCGTGCGCAGATGCTCAGCGCTGc > 1:639353/1‑150 (MQ=255) cccGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCCCGACCTGGTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGt > 2:1800996/1‑150 (MQ=255) cccGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGt > 2:1800801/1‑150 (MQ=255) cccGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGt > 2:1368160/1‑150 (MQ=255) ccGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGtt > 1:2151980/1‑150 (MQ=255) aCCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCa > 2:1269871/1‑150 (MQ=255) ccGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAg < 1:938718/150‑1 (MQ=255) ccGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACATGTAAATGAAATCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAg < 2:2019871/150‑1 (MQ=255) ttCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTAc < 1:2289471/150‑1 (MQ=255) gCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTActgc < 2:321922/150‑1 (MQ=255) ccAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCg > 1:1061388/1‑134 (MQ=255) ccAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTActgct > 1:2317999/1‑150 (MQ=255) ccAAGGCATCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTActtct > 2:816068/1‑150 (MQ=255) aaGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGa < 1:466571/150‑1 (MQ=255) aaGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCCGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGa > 1:541212/1‑150 (MQ=255) ccTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCAAGACCTGGTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGCTTCAAGGTACTGCTGATCga > 2:2167685/1‑150 (MQ=255) cTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCgaa < 1:1632475/150‑1 (MQ=255) cTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCgaa < 1:2011406/150‑1 (MQ=255) cTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGCACTGCTGATCgaa > 2:607812/1‑150 (MQ=255) gAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCgaagaa < 1:349737/150‑1 (MQ=255) aaCGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGaagaag < 2:1447092/150‑1 (MQ=255) aCGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAgg < 2:580857/150‑1 (MQ=255) gcgGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGCCCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGcc < 1:257812/150‑1 (MQ=255) ggCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCt < 2:1760578/114‑1 (MQ=255) ggCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCt > 1:1760578/1‑114 (MQ=255) ggCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCaa > 2:1367228/1‑125 (MQ=255) ggCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCaa < 1:1367228/125‑1 (MQ=255) ggCTGGATCACCCACGACGCCTCGCGCCCGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGAAGTGATGCCGGCGGCGACACCAGTCCGTTGAAGTTGTGGTCTTCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCa > 1:2378396/1‑150 (MQ=255) gCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCAc < 2:2329657/150‑1 (MQ=255) tGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCcggcg > 1:338803/1‑82 (MQ=255) gATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGaa > 1:2108292/1‑150 (MQ=255) tCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCgaa > 2:2249927/1‑134 (MQ=255) tCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCgaa < 1:2249927/134‑1 (MQ=255) cACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGNGCTGCCNGTTTCAAGGTACNGCTGATCGAAGAAGGCCCACTGAANAc < 1:2167685/150‑1 (MQ=255) cccACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACca < 2:1805289/150‑1 (MQ=255) cACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACcagc > 2:469059/1‑150 (MQ=255) acgacgCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACcagca > 1:2314177/1‑150 (MQ=255) cgacgCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGTTGATCGAAGAAGGCCCACTGAAGACcagcag < 2:29115/150‑1 (MQ=255) gCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGAAATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGAt < 1:125920/150‑1 (MQ=255) gAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACctgctg < 2:763779/150‑1 (MQ=255) aGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCCCCCGCTgg < 2:2314177/150‑1 (MQ=255) aGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTgg < 2:2314131/150‑1 (MQ=255) gCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGa < 2:1919359/104‑1 (MQ=255) gCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGa > 1:1919359/1‑104 (MQ=255) cACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCaa < 2:2438789/92‑1 (MQ=255) aCGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGgaga < 2:1861420/150‑1 (MQ=255) aCGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGgaga < 2:541212/150‑1 (MQ=255) gACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGtt < 1:2110793/85‑1 (MQ=255) gACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGtt > 2:2110793/1‑85 (MQ=255) gACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGc > 1:2049716/1‑150 (MQ=255) gACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGc > 1:1559260/1‑150 (MQ=255) aCCTGTTTTTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGTCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCg > 2:1483972/1‑150 (MQ=255) ccTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGAGCCAACTACCTGCTGGAGAGCGa > 1:122210/1‑150 (MQ=255) cTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGaa < 2:877677/150‑1 (MQ=255) tGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAg < 2:160768/150‑1 (MQ=255) aGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCa > 1:1869770/1‑150 (MQ=255) aGGCCGACATTGCCATGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCa < 2:2439781/150‑1 (MQ=255) gCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGc < 2:2131333/150‑1 (MQ=255) cGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGaa > 2:143431/1‑102 (MQ=255) cGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGaa < 1:143431/102‑1 (MQ=255) gCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGAc > 1:2264201/1‑98 (MQ=255) gCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGAc < 2:2264201/98‑1 (MQ=255) cGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCa < 2:576392/88‑1 (MQ=255) gTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGaa < 1:1119228/150‑1 (MQ=255) gTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGaa < 2:154461/150‑1 (MQ=255) tGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAg > 2:549850/1‑150 (MQ=255) tCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGc < 1:590783/119‑1 (MQ=255) tCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGc < 1:1302615/150‑1 (MQ=255) ggCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTg < 1:475730/150‑1 (MQ=255) actggtggcgCCGCCGGCACCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGc < 1:508640/128‑1 (MQ=255) gCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTgg < 1:1414380/150‑1 (MQ=255) ctggtggcgCCGCCGGCACCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTa > 2:1871932/4‑124 (MQ=255) ctggtggcgCCGCCGGCACCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTa < 1:1871932/121‑1 (MQ=255) tggtggcgCCGCCGGCACCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACcagcag < 1:919285/91‑1 (MQ=255) tggtggcgCCGCCGGCACCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCGGATCGAAGAAGGCCCACTGAAGACcagcag > 2:919285/3‑93 (MQ=255) cAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTggg < 1:1568343/150‑1 (MQ=255) gtggcgCCGCCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGaa < 2:1112603/82‑1 (MQ=255) gtgCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCa < 1:1800996/150‑1 (MQ=255) gtgCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCa < 1:1800801/150‑1 (MQ=255) tgCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCAt > 1:1249945/1‑150 (MQ=255) ccGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAACACCAGCAGCGATTTCCACCTGCTGGAGAGCGTAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCATGa < 1:556394/150‑1 (MQ=255) cggcggCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCATGAg > 2:606242/1‑150 (MQ=255) | ATCTGAAAACAACAAGAGCATCGCCAATGCCTGTCCCCGACCCGTTTCGCCAAGGCCTCGAACGCGGCTGGATCACCCACGACGCCTCGCGCCTGGAGCACGACCTGTTTCTGGAGGCCGACATTGCCGTGATCGGCAGTGGTGCCGGCGGCGCCACCAGTGCGCAGATGCTCAGCGCTGCCGGTTTCAAGGTACTGCTGATCGAAGAAGGCCCACTGAAGACCAGCAGCGATTTCCACCTGCTGGAGAGCGAAGCCTACGCCAGCCTGTACCAGGAAGGGCTGGGGCGCATGAGC > NC_002947/5843409‑5843704 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |