| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,873,632 | T→G | 7.4% | L94R (CTG→CGG) ‡ | PP_5147 → | haloacid dehalogenase‑like family hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,873,632 | 0 | T | G | 7.4% | 315.9 / 12.9 | 119 | L94R (CTG→CGG) ‡ | PP_5147 | haloacid dehalogenase‑like family hydrolase |
| Reads supporting (aligned to +/- strand): ref base T (52/58); new base G (5/4); total (57/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
CCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAGGTGCGCGACGGCCGC > NC_002947/5873483‑5873774 | ccAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCt > 2:1345518/1‑150 (MQ=255)ccAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCt > 1:337419/1‑150 (MQ=255)ccAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCt > 1:515892/1‑150 (MQ=255)ccAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCt > 1:1563885/1‑150 (MQ=255)ccAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATCCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCt > 2:1077187/1‑150 (MQ=255) ggATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGc > 1:993337/1‑150 (MQ=255) cccTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTtgc < 1:85248/149‑1 (MQ=255) aCCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTtgc < 1:618995/150‑1 (MQ=255) ccTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCAGGGCCTtggg < 2:1375345/150‑3 (MQ=255) cTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACCCCCAGGGCCCTGCTCGACGAGTGGCACCGCGACTTCATGGCCGGCTGCATCGAGCCCATCGTC‑CTGCCCACGGCCCTGGCCTtgctg > 2:487784/1‑150 (MQ=255) cTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTtgggc < 2:515892/150‑4 (MQ=255) cTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTtgctg > 2:610946/1‑150 (MQ=255) cTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTtgctg > 2:6845/1‑150 (MQ=255) cTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTtgctg < 2:1563885/150‑1 (MQ=255) tCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGCGTGGCACCGCGACTTCATGCGCGCCTGCATCGAGCCCATCGTC‑CTGCCCCAGGCCCTGGCCTtgctgc > 2:33860/1‑150 (MQ=255) tCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTtgctgc > 1:832775/1‑150 (MQ=255) tCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTtgctgc > 1:73529/1‑150 (MQ=255) tCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCAGGGCCTtgggca > 1:1598139/1‑146 (MQ=255) tCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCAGGGCCTtgggca < 1:861144/150‑5 (MQ=255) cAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCAGGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTgca < 2:73529/150‑1 (MQ=255) aaTGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGTGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTgcag < 2:344072/150‑1 (MQ=255) cACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTgcagcagca < 2:1632782/150‑1 (MQ=255) ccTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACcg > 2:2220980/1‑150 (MQ=255) ccTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACcg > 1:727736/1‑150 (MQ=255) ccTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACcg > 1:1325354/1‑150 (MQ=255) cTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACcgc > 1:1989656/1‑150 (MQ=255) tGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACcgcg > 1:1798767/1‑150 (MQ=255) ggACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGa < 2:671823/150‑1 (MQ=255) ccTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACTTTGGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAggc < 1:2386524/150‑1 (MQ=255) tGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAggcgg > 2:1563804/1‑150 (MQ=255) tGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAggcgg < 2:1383661/150‑1 (MQ=255) tGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCCGGCCTTCATGCCAGCCGGCATCGATGCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAggcgg > 1:167772/1‑150 (MQ=255) aGGCATACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAggcgggcg > 2:2376870/1‑150 (MQ=255) ggCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCATTGCTGCAGCAGCACCGCGAGGCGGGCGa < 1:1872841/150‑1 (MQ=255) gCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGAc < 2:1634446/150‑1 (MQ=255) cTACCTGGCCTTTTCCATGGAGATCATGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCa > 2:692898/1‑150 (MQ=255) tGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTgg < 1:6845/150‑1 (MQ=255) ccTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTtgc < 1:740598/114‑1 (MQ=255) ccTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGa < 1:2036628/150‑1 (MQ=255) ccTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGAGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTtgc > 2:740598/1‑114 (MQ=255) ttttCCATGGAGTTCGTGGCGGCAACACCCAGGGCGAGGCGCGAGGAGTGGCACCGCGACTTCATGCGCGACGGCATCGCGACCAACGGC‑CTGCCCAAGGCCCTGGCGTTGCTGCGGCAGCAGCGCGGGGCGGGCGACCAGCTGGTGagc < 2:737484/150‑3 (MQ=255) ttttCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCAGGGCCTtgggca < 1:1042023/115‑5 (MQ=255) ttttCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCAGGGCCTtgggca > 2:1042023/1‑111 (MQ=255) tCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGatcatc < 2:2049442/150‑1 (MQ=255) ccATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGAtcatca < 2:506850/150‑1 (MQ=255) aTGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCAcc > 1:516436/1‑150 (MQ=255) agaTCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTa < 1:2074878/150‑1 (MQ=255) tCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCa > 1:1251900/1‑150 (MQ=255) cTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAAc > 2:1755712/1‑150 (MQ=255) tGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAAcc > 1:55493/1‑150 (MQ=255) gcggcAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCAACCGCCGCTG‑CTAAGGCCCTGGCCTTGCGGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGc < 1:2122541/150‑1 (MQ=255) cAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCg > 1:103127/1‑150 (MQ=255) aaCACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGt < 2:55493/150‑1 (MQ=255) cacCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTca > 1:1405113/1‑150 (MQ=255) ccATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACcgc > 1:284731/1‑98 (MQ=255) ccATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACcgc < 2:284731/98‑1 (MQ=255) cGGCTCGACGCGTGGTACCGCGACGTCATGCGCGTCTGCATCGAGCCCATCGTC‑CTGCCCAAGTTCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGTGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATc < 1:487784/150‑1 (MQ=255) acggggggCACCGCGACTTCAGCCGCGACGGCATCGATCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTNGTGANCATCACCGCTACCANCCGCTTCGTCACCGCACCGATCGCCCGgc < 1:33860/144‑1 (MQ=255) gaGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGgcgc > 2:294496/1‑150 (MQ=255) gCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTg < 2:341311/94‑1 (MQ=255) gCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTg > 1:341311/1‑94 (MQ=255) cACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTgggg > 2:2444397/1‑150 (MQ=255) cACCGCGACTTCATGCGCGACCGCCTCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGGAGCACCGCGAGGCGGGCGACCAGCTGGTGAGCATCACCGCTACCAACGGCTAGGTCACCGCACCGCTGGCCCGGGGCCAgggg > 2:1978229/1‑150 (MQ=255) aCCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGAc < 1:603022/86‑1 (MQ=255) ccGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGt > 1:1393373/1‑150 (MQ=255) ccGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGt < 1:134054/150‑1 (MQ=255) gcgACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGACCGCCCGTCGCCGGGGGGTGc < 2:1798767/150‑1 (MQ=255) gACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCgg < 1:1563804/150‑1 (MQ=255) gACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCgg < 2:143556/150‑1 (MQ=255) gACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCgg < 1:2220980/150‑1 (MQ=255) gACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCCAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCgg < 1:1978229/150‑1 (MQ=255) cgcgACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTg < 1:2444397/150‑1 (MQ=255) tGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAAcc > 1:1135615/1‑150 (MQ=255) aTCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGaa > 1:2093395/1‑150 (MQ=255) tCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCg < 2:19173/115‑1 (MQ=255) gagaCCATCGCG‑CTGGCCAAGGCGCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGc > 2:2368926/1‑150 (MQ=255) gAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCGTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGTGTGTTGCTGTCAACCGCATGc > 2:1126884/1‑150 (MQ=255) gAGCCCATCGTC‑CTGCCCAAGCGCCTGGCCTTGCTTCAGCAGCACCGCGAGGCGGGCGGCCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGc < 1:1265241/150‑1 (MQ=255) aGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCgg > 2:601915/1‑128 (MQ=255) cccATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAg < 1:1755712/150‑1 (MQ=255) cccATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAg < 2:1989656/150‑1 (MQ=255) ccATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAgg < 2:2313533/150‑1 (MQ=255) aTCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTa < 2:1530812/76‑1 (MQ=255) tC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGTACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAAt < 2:1227399/138‑1 (MQ=255) tC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAAt > 1:1227399/1‑138 (MQ=255) tgcagcAAGGCCAGGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAGGTGCGCGAc > 1:2047905/6‑150 (MQ=255) tgcagcAAGGCCAGGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAGGTGCGCGAc > 1:603195/6‑150 (MQ=255) cTGCACAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTg > 1:911961/1‑126 (MQ=255) tGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAGGTGCGCGACg < 1:2359837/150‑1 (MQ=255) gcagcAAGGCCAGGGCCTTG‑GGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTca > 2:1173042/5‑83 (MQ=37) cccAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATc > 1:742631/1‑93 (MQ=255) cccAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATc < 2:742631/93‑1 (MQ=255) cccAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAGGTGCGCGACGGc > 2:107644/1‑150 (MQ=255) ccAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGc > 1:1309616/1‑120 (MQ=255) ccAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGc < 2:1309616/120‑1 (MQ=255) cAAGTCCCTGTCCTTGCTGCAGCTGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAGGTGCGCGACGGCCg < 1:1077187/150‑1 (MQ=255) cAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAgg < 1:29725/137‑1 (MQ=255) cAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAgg > 2:29725/1‑137 (MQ=255) aaGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAGGTGCGCGACGGCCGc > 1:1602317/1‑150 (MQ=255) aaGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAGGTGCGCGACGGCCGc < 2:1393373/150‑1 (MQ=255) | CCAGGATTACCTCAATGGCACCCTGGACCTGCAGGCCTACCTGGCCTTTTCCATGGAGATCCTGGCGGCAACACCCATGGCCCGGCTCGACGAGTGGCACCGCGACTTCATGCGCGACTGCATCGAGCCCATCGTC‑CTGCCCAAGGCCCTGGCCTTGCTGCAGCAGCACCGCGAGGCGGGCGACCAGCTGGTGATCATCACCGCTACCAACCGCTTCGTCACCGCACCGATCGCCCGGCGCCTGGGGGTGCGGGTGTTGCTGGCAACCGAATGCGAGGTGCGCGACGGCCGC > NC_002947/5873483‑5873774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |