| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,020,607 | G→A | 6.0% | P33L (CCG→CTG) | dadA‑II ← | D‑amino acid:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,020,607 | 0 | G | A | 6.0% | 245.3 / 4.5 | 83 | P33L (CCG→CTG) | dadA‑II | D‑amino acid:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (39/38); new base A (2/3); total (42/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.80e-01 | |||||||||||
CCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAATG > NC_002947/6020463‑6020750 | cccGTGAGCTTGATGGCCAGGGGGACGTGGCGCTCCTTCATCCACTTAATGCATTTGCGCAACACTTCGAGTTTAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTgg < 1:1224579/150‑1 (MQ=255) gTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCgg > 2:1825495/1‑150 (MQ=255) gCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCAGCCGGCGGtggc > 1:2295934/1‑147 (MQ=255) ttGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGacc > 1:2288389/1‑150 (MQ=255) ttGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCAGCCGGCGGtggcca < 2:843796/150‑6 (MQ=255) gATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGaccac > 1:889605/1‑150 (MQ=255) gATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCAGCCGGCGGtggccatg < 2:2295934/150‑8 (MQ=255) aTGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTgg < 1:1793979/138‑1 (MQ=255) aTGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTgg > 2:1793979/1‑138 (MQ=255) ggCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGt < 1:2172287/150‑1 (MQ=255) ggCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGt < 1:1888064/150‑1 (MQ=255) gCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTg > 2:1027853/1‑150 (MQ=255) aGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAGAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACt > 2:2010431/1‑150 (MQ=255) aGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACt > 2:1197106/1‑150 (MQ=255) ggggggCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACtt > 2:2086030/1‑150 (MQ=255) gggggCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTc < 1:1086633/150‑1 (MQ=255) gggggCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTc < 1:2340148/150‑1 (MQ=255) gggggCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTc < 1:5496/150‑1 (MQ=255) gggCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGa < 1:2450124/150‑1 (MQ=255) gCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGaaa < 2:1631877/150‑1 (MQ=255) tGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCt > 1:1442511/1‑150 (MQ=255) gACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGGCGCCCACCGTGACTTCGAAACCtt > 2:1210199/1‑150 (MQ=255) gcagcCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCATGACTTCGAAACCTTGCCGGGCCa > 1:1899719/1‑150 (MQ=255) gcCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGgt > 2:2235904/1‑150 (MQ=255) cTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGgtagta > 2:1546739/1‑150 (MQ=255) ttGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGtagtag < 2:1985470/150‑1 (MQ=255) gATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGc > 1:2446075/1‑150 (MQ=255) tttGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGc < 2:758239/150‑1 (MQ=255) cGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTcc < 1:2005048/150‑1 (MQ=255) cGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTcc < 1:1027853/150‑1 (MQ=255) gTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGa > 2:986255/1‑150 (MQ=255) gTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGCCGATCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGa < 2:2159281/150‑1 (MQ=255) tACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGGGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGAt < 2:187956/150‑1 (MQ=255) tACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGGTCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGAt < 1:2208128/150‑1 (MQ=255) gCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTac < 1:986255/150‑1 (MQ=255) cAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTacac > 2:1956257/1‑150 (MQ=255) aGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACAcc < 1:1913321/150‑1 (MQ=255) ggCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCg < 2:88785/150‑1 (MQ=255) aGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTAcc < 1:1956257/150‑1 (MQ=255) cccAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGtagtag > 1:1154751/1‑119 (MQ=255) cccAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGtagtag < 2:1154751/119‑1 (MQ=255) cccAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAgg > 1:1019545/1‑120 (MQ=255) cccAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAgg < 2:1019545/120‑1 (MQ=255) ccAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAg > 1:1481559/1‑150 (MQ=255) ccAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAg > 1:1894177/1‑150 (MQ=255) ccAGGGCGAGGCATAGCCGGGCGAGATATCGACCGCGATGGCAAAGCCGTTAGCCATGGCCACCGCCTGCTGGAGGCTGAAAAACCTTTAGACGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGGTTACACCGGTACCAAg > 1:1751145/1‑150 (MQ=255) cAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTAAGCGGCCTTGCCGGGCCAGGTAGTAGGCACTGGCGGGTCCGATTACACCGCTACCAAGt > 1:24402/1‑150 (MQ=255) aGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCTGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTa < 2:1535604/150‑1 (MQ=255) ggCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAAc > 1:2152115/1‑150 (MQ=255) cATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTc < 2:1481559/150‑1 (MQ=255) gagaTCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGttt > 1:1952874/1‑148 (MQ=255) gagaTCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGttt < 2:1952874/148‑1 (MQ=255) gagaTCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTa < 1:1642269/150‑1 (MQ=255) aTCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATcc > 1:864225/1‑150 (MQ=255) tCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTg > 1:2435870/1‑76 (MQ=255) tCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTg < 2:2435870/76‑1 (MQ=255) cTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCt < 1:2321471/150‑1 (MQ=255) tGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGcc > 1:449272/1‑76 (MQ=255) tGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGcc < 2:449272/76‑1 (MQ=255) cGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCacac > 1:1814809/1‑150 (MQ=255) gTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACgcgg > 1:406504/1‑150 (MQ=255) ggCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGtt > 1:8339/1‑130 (MQ=255) ggCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGtt < 2:8339/130‑1 (MQ=255) cAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGgcgcgc > 1:1657813/1‑150 (MQ=255) cAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGgcgcgc < 1:1803823/150‑1 (MQ=255) aaaGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGcgcc > 1:430207/1‑150 (MQ=255) gTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGGAGTAGGCCCTGGCGGTTCCCATTACACCCCTACCAAGTACCAAAACCCGCCACGCATTATCCCTCACACGCGGCGCGCCGCACACt > 2:1012753/1‑150 (MQ=255) tttCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACtt < 2:864225/150‑1 (MQ=255) cATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTAt < 2:1049018/150‑1 (MQ=255) aTGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCCCGCGTTTAtt > 1:100035/1‑150 (MQ=255) aTGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTAtt > 1:1773503/1‑150 (MQ=255) aTGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTAtt < 1:2235904/150‑1 (MQ=255) aTGGCCACCACCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGCAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTAtt > 2:946160/1‑150 (MQ=255) tcgaCCGCCAGCCGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGtttt > 1:161115/4‑113 (MQ=255) tcgaCCGCCAGCCGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGtttt < 2:161115/110‑1 (MQ=255) ccACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGaaa < 1:1197106/150‑1 (MQ=255) cACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTgg > 2:629707/1‑65 (MQ=255) cACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTgg < 1:629707/65‑1 (MQ=255) cACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGGGGCGCGCCGCACACTTTTATTGAAAt > 1:1356/1‑150 (MQ=255) cACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAAt > 2:2014983/1‑150 (MQ=255) cACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAAt < 2:430207/150‑1 (MQ=255) cACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAAt > 1:187454/1‑150 (MQ=255) aCCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAATg < 2:1269204/150‑1 (MQ=255) ccgccgGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTa < 2:2233360/141‑1 (MQ=255) ccgccgGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTa > 1:2233360/1‑141 (MQ=255) | CCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAATG > NC_002947/6020463‑6020750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |