| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 587,079 | C→G | 7.7% | P43R (CCG→CGG) | PP_0497 → | Cro/CI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 587,079 | 0 | C | G | 7.7% | 324.2 / 15.2 | 105 | P43R (CCG→CGG) | PP_0497 | Cro/CI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (56/40); new base G (4/4); total (61/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01 | |||||||||||
Only 100 of 108 total aligned reads displayed.
GCGTCACCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAGTTGTTCC > NC_002947/586932‑587228 | gcgTCACCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACAGCCCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGa > 1:1842817/1‑150 (MQ=255) tCACCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACgg > 1:1314967/1‑150 (MQ=255) ccTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCGGACGGCtt < 2:502168/150‑1 (MQ=255) ggATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCa > 1:87806/1‑150 (MQ=255) aTTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc < 2:2163876/150‑1 (MQ=255) atatGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGACTGTTGTCGATCAAACGCACGCATTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGc < 1:2124664/150‑1 (MQ=255) cGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCgg > 1:1351645/1‑150 (MQ=255) gATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGc < 1:948321/142‑1 (MQ=255) gATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGc > 2:948321/1‑142 (MQ=255) tCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCCCCCGCGCGCAGTTCCACAAGTTCATGAGCTTGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGa < 1:415723/150‑1 (MQ=255) tCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGa > 1:1833791/1‑150 (MQ=255) aCTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGAc < 1:997592/149‑1 (MQ=255) ttCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCGGACGGCttt > 1:1216927/1‑125 (MQ=255) ttCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCGGACGGCttt < 2:1216927/125‑1 (MQ=255) ttCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc < 2:890386/129‑1 (MQ=255) ttCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc > 1:890386/1‑129 (MQ=255) ttCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGActtc > 2:2136257/1‑150 (MQ=255) ttCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGActtc > 2:499138/1‑150 (MQ=255) ttCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGActtc > 2:1337518/1‑150 (MQ=255) ttCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGActtc > 1:1422615/1‑150 (MQ=255) gCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACttcttc > 1:55035/1‑150 (MQ=255) gCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACttcttc > 1:1663145/1‑150 (MQ=255) aCAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGgt < 1:1898874/150‑1 (MQ=255) aaaCCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCCAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGGCTTCTGCGgtgt > 1:283992/1‑150 (MQ=255) aCCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTTAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCg > 1:696449/1‑150 (MQ=255) cTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTGGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAg > 1:783168/1‑150 (MQ=255) cTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAg > 1:258198/1‑150 (MQ=255) cTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAg > 1:1221308/1‑150 (MQ=255) tCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGaa < 2:1722713/121‑1 (MQ=255) aaaCTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGAt < 1:856542/150‑1 (MQ=255) ttGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACg > 1:96870/1‑150 (MQ=255) gCCTGCAGTCACTACCGCTCTATTTCCGAAGTTGGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGaa < 2:1583447/150‑1 (MQ=255) ccTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAAc < 2:55035/150‑1 (MQ=255) cTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGc < 2:2316000/121‑1 (MQ=255) cTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGc > 1:2316000/1‑121 (MQ=255) tGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTg > 1:2012694/1‑150 (MQ=255) gCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGa > 1:2244762/1‑150 (MQ=255) cAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGaa < 2:2089145/150‑1 (MQ=255) gTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAAcc < 1:1337518/150‑1 (MQ=255) ccGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCccgc < 2:280348/150‑1 (MQ=255) ccGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCccgc > 2:368630/1‑150 (MQ=255) gCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCccgccg > 2:1789534/1‑150 (MQ=255) tATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAAc > 2:1820901/1‑131 (MQ=255) tATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAAc < 1:1820901/131‑1 (MQ=255) tATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAAGATTACGAACTGAACCTGCCCGCCGAGCa > 2:437344/1‑150 (MQ=255) aTTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCccgcc < 1:696012/144‑1 (MQ=255) aTTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCccgcc > 2:696012/1‑144 (MQ=255) aTTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAg > 2:365561/1‑150 (MQ=255) tttCCGAAGTTTGCCGCCAGCTGTCGATCAAAACAGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGt > 1:1380222/1‑150 (MQ=255) tCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCGGTCTGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTc > 2:1073021/1‑150 (MQ=255) cGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc < 2:2116524/82‑1 (MQ=255) cGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc > 1:2116524/1‑82 (MQ=255) cGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGATTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGc > 1:736988/1‑150 (MQ=255) aaGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGccc < 1:368630/150‑1 (MQ=255) gTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGt > 1:465714/1‑150 (MQ=255) tttGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTc < 2:79718/150‑1 (MQ=255) tttGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTc < 2:1663145/150‑1 (MQ=255) tttCCCGCCAGCTGTCGCTCCACCGCGAGAAGTCTAGAGGGTACCGGAACACGCGCAGCCGGCCGACGTCTTTCAACCGGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTc < 2:1842817/150‑1 (MQ=255) gccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCg > 1:1156737/1‑150 (MQ=255) ccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCgg > 1:873134/1‑150 (MQ=255) ccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCgg > 2:2008708/1‑150 (MQ=255) cAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGt < 2:1314967/150‑1 (MQ=255) tCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCgg > 2:230265/1‑150 (MQ=255) tCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCgg < 2:87806/150‑1 (MQ=255) gATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGCTAGCGAATTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGt > 2:64677/1‑150 (MQ=255) gATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCTGTGCGCGGGt > 2:2154100/1‑150 (MQ=255) aTCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGc < 2:2408671/112‑1 (MQ=255) aTCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGc > 1:2408671/1‑112 (MQ=255) aTCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTa > 2:879831/1‑150 (MQ=255) aTCAACCGCGCGCAGTTCAACAAGTACCTGAGCGAGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTa > 1:1211852/1‑150 (MQ=255) cAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATc < 2:2171301/150‑1 (MQ=255) aCCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCTCGCAGAGGACTGCGCCCGTCTGATCGGTGCGCGGCTATCGc < 1:461178/150‑1 (MQ=255) aCCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGc > 2:2184603/1‑150 (MQ=255) aCCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGc > 2:1003828/1‑150 (MQ=255) cgcgcgCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGccc < 1:2136257/150‑1 (MQ=255) gcgcgcAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGcccc < 1:499138/150‑1 (MQ=255) gcgcAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTTAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAg < 2:696449/150‑1 (MQ=255) gcgcAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAg < 1:2140112/150‑1 (MQ=255) gcgcAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTAGCGCCCCAg > 2:621837/1‑150 (MQ=255) ttCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAg > 2:1351397/1‑150 (MQ=255) ttCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAg > 2:787751/1‑150 (MQ=255) tCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGt < 2:860495/125‑1 (MQ=255) tCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGt > 1:860495/1‑125 (MQ=255) caacaaGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCa > 2:2148348/1‑150 (MQ=255) caacaaGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCa > 1:203914/1‑150 (MQ=255) aaGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAAccc > 2:7829/1‑150 (MQ=255) tACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGt < 2:873134/150‑1 (MQ=255) cTGAGCGTGCAAAGCCCTCCGACGGTTTTCAACCTGACGCGTATCGGCGACTTCTTCGGTGTCTAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGAc < 2:783168/150‑1 (MQ=255) aaaGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCg > 1:960029/1‑150 (MQ=255) aaacagTCCGACGGCTTTCAACCTGGAGCGTAGCGGGGCCTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGa < 2:307337/145‑1 (MQ=255) aaGCCGTCGGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCa > 2:1447660/1‑134 (MQ=255) aaGCCGTCGGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCa < 1:1448519/134‑1 (MQ=255) aaGCCGTCGGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCa < 1:1447660/134‑1 (MQ=255) aaGCCGTCGGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCa > 2:1448519/1‑134 (MQ=255) aaGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGa < 1:2148348/150‑1 (MQ=255) gCCGTCGGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAgt > 2:879336/1‑150 (MQ=255) ccGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAgtt > 2:995029/1‑150 (MQ=255) gTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCCACCCAGTGACCCGATCAGCGAg > 2:1696803/1‑146 (MQ=255) gTCCGACGGATTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAg < 1:1696803/146‑1 (MQ=255) cccGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAgtngtt < 2:1498678/149‑1 (MQ=255) | GCGTCACCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCGTATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAGTTGTTCC > NC_002947/586932‑587228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |