| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 788,584 | C→A | 9.8% | intergenic (+31/‑182) | ettA → / → gdhA | ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 788,584 | 0 | C | A | 9.8% | 248.1 / 5.7 | 84 | intergenic (+31/‑182) | ettA/gdhA | ADP/ATP ratio sensor/translation inhibitor/NADP‑dependent glutamate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (36/38); new base A (3/6); total (40/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCT > NC_002947/788449‑788732 | ttcttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCAtt > 1:161957/1‑150 (MQ=255) ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGACGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCAttttt > 2:2123172/1‑150 (MQ=255) ttcGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGACGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCAttttt > 2:2121958/1‑150 (MQ=255) ggTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCAGCACCGTGTACGGCACAAGAAACTGGCCCAGTCAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCt < 2:1287358/150‑1 (MQ=255) aCTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCg < 1:1814784/150‑1 (MQ=255) tACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGa > 1:1540835/1‑150 (MQ=255) tACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGa > 1:1963254/1‑150 (MQ=255) acCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCt < 1:83411/141‑1 (MQ=255) acCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCt > 2:83411/1‑141 (MQ=255) gTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCaa > 2:2089356/1‑116 (MQ=255) gTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCaa < 1:2089356/116‑1 (MQ=255) gTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCtata > 2:2107758/1‑150 (MQ=255) cGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAt < 1:449238/150‑1 (MQ=255) gAAGCCGACCGCCAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATg < 1:2204810/150‑1 (MQ=255) aaGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATgg > 2:1666209/1‑150 (MQ=255) aaGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATgg < 1:10288/150‑1 (MQ=255) aaGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCAATAAATgg > 2:1312972/1‑150 (MQ=255) ccGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATACA‑CAAGAATGG‑GGCCACAAGTGGCCCCATTTTTGTGACTGGCGGACCGCTATACATggcga > 1:109511/1‑150 (MQ=255) cGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgag < 1:2107758/150‑1 (MQ=255) cGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgag > 1:1000330/1‑150 (MQ=255) gACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATaaa > 1:1523007/1‑142 (MQ=255) gACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATaaa < 2:1523007/142‑1 (MQ=255) gACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCACTTGGGGCCCCAttctt < 1:511894/120‑1 (MQ=38) aCCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgaggc < 1:1320227/150‑1 (MQ=255) ccGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgaggcg > 2:1559695/1‑150 (MQ=255) ggcatgagCGTCTTGGTGAGGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGaa < 2:509923/144‑1 (MQ=255) gCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCAAAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGaa < 2:670874/150‑1 (MQ=255) cAAGAAGCGTCGGGGTGATGCTGCTGCCCAGCCGCACGGTGTACGGCAAAAGAATCTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg < 1:1320346/150‑1 (MQ=255) aagaagCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAt < 1:1619520/137‑1 (MQ=255) aagaagCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAt > 2:1619520/1‑137 (MQ=255) aagaagCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGAGTACGGCACAATAAACGTGAACAGTAAGCCGGTTTTCAGA‑ACAGCAA‑AATGGTGTCCTGAAGGGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATAGCTGGGCGAAgg > 1:1125805/1‑150 (MQ=255) tCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgaggc > 2:2335198/1‑137 (MQ=255) tCTGGGTGAGGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATggcgaggc < 1:2335198/137‑1 (MQ=255) cTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTg < 2:1649018/150‑1 (MQ=255) cTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGCCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTg < 1:367869/150‑1 (MQ=255) tGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGt > 2:2206742/1‑150 (MQ=255) ggTNATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGtat > 2:1513716/1‑150 (MQ=255) gATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGccc > 2:1006868/1‑82 (MQ=255) gATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGccc < 1:1006868/82‑1 (MQ=255) ctgcCCAGCCGCACCGTGTACGGCACAAGAAACTGGGCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACAt > 2:2364695/1‑150 (MQ=255) cccAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATtaa > 1:1414112/1‑150 (MQ=255) cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCtata > 1:96472/1‑107 (MQ=255) cAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCtata < 2:96472/107‑1 (MQ=255) aGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAt < 2:1931355/109‑1 (MQ=255) aGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAAt > 1:1931355/1‑109 (MQ=255) ccGAACCGTGTACCACACAAGTCACTGGAACAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCa < 2:2358988/150‑1 (MQ=255) tgtACGGCACAAGAAACTGGCCCAGTAAGCCGGTTCTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAaataa > 1:630882/1‑150 (MQ=255) aCGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAAttt < 1:1513716/150‑1 (MQ=255) aCGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTATGCCTGGCGGACCGCTATAAAT‑‑CGCCGCGACGTGCCACTCCGTGTATGCACTGACATAAAACGCACCAAATAAttt > 1:1740865/1‑150 (MQ=255) ggCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCa > 2:1680338/1‑150 (MQ=255) cacaAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACt < 1:538242/122‑1 (MQ=255) cacaAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACt > 2:538242/1‑122 (MQ=255) acaAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCaaaa > 2:103169/1‑150 (MQ=255) aaGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAaataat > 2:149551/1‑141 (MQ=255) aaGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAaataat < 1:149551/141‑1 (MQ=255) aaGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCaaaaaa > 2:429506/1‑150 (MQ=255) gAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAGGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAAttt > 2:1279403/1‑141 (MQ=255) gAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAAttt < 1:1279403/141‑1 (MQ=255) tGGCCCAGTAATCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGAc > 2:2148908/1‑72 (MQ=255) tGGCCCAGTAATCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGAc < 1:2148908/72‑1 (MQ=255) tGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTg < 1:1319539/104‑1 (MQ=255) tGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTg > 2:1319539/1‑104 (MQ=255) ccAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg < 2:2143416/90‑1 (MQ=255) ccAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAg > 1:2143416/1‑90 (MQ=255) aaGTAAGCCGGTTTTCTGATGCA‑AAAGAATGG‑GGAAAAAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAAGTGTATT‑‑TTGTATACACTTACATAAAACGCACAAAAAAAAAAAAAAAAAACGACATTTCGc < 2:161957/149‑1 (MQ=255) agaaaGCCGGTTTTCTGATGCA‑CAAGAATGG‑AGCAACAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGATGTATT‑‑TTGTATACACTTACATAAAACGCACAAAAAAAAAAAAAAAAAACGACATTTCGcc < 2:109511/147‑1 (MQ=255) aGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGcc < 2:1540835/150‑1 (MQ=255) aGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGcc < 2:1963254/150‑1 (MQ=255) ccGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCAtt > 2:1607004/1‑44 (MQ=255) ccGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCAtt < 1:1607004/44‑1 (MQ=255) gTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCgg < 1:429506/150‑1 (MQ=255) gTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCgg > 2:192784/1‑150 (MQ=255) gATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATGATTCTGAAAAAACGACATTTCGCCCTATTCCGGTGCGAtt > 1:723799/1‑150 (MQ=255) aggCA‑CAAAAATGG‑GGCCACTTGGGGCCCCATTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAAtt < 2:1784315/110‑1 (MQ=25) aggCA‑CAAAAATGG‑GGCCACTTGGGGCCCCATTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAAtt > 1:1784315/3‑112 (MQ=25) a‑caAAAATGG‑GGCCACTTGGGGCCCCATTCTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGtat < 2:1749310/80‑1 (MQ=18) caAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCGCCAAAAAAAAAAAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttct < 2:1414112/150‑1 (MQ=255) aaGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttctt > 2:976267/1‑150 (MQ=255) aaGAATGG‑GGCCACAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGcttctt < 2:289107/150‑1 (MQ=255) aaaaTGG‑GGCCACTTGGGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg > 2:1274985/3‑150 (MQ=255) aGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTGTCCACTTACATAAAATGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 1:2123172/150‑1 (MQ=255) aGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 2:630882/150‑1 (MQ=255) aGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 2:1555202/150‑1 (MQ=255) aGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 1:2206742/150‑1 (MQ=255) aGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAACGTGTACA‑‑TCTTATTCACTTACATATAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTg < 1:2121958/150‑1 (MQ=255) gAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTgg < 1:1680338/150‑1 (MQ=255) cccAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCt < 1:1666209/150‑1 (MQ=255) | TTCTTCGAAGGTAACTACACCGAGTACGAAGCCGACCGCAAGAAGCGTCTGGGTGATGCTGCTGCCCAGCCGCACCGTGTACGGCACAAGAAACTGGCCCAGTAAGCCGGTTTTCTGATGCA‑CAAGAATGG‑GGCCCCAAGTGGCCCCATTTTTGTGCCTGGCGGACCGCTATAAATGGCGAGGCGAAGGTGTATT‑‑TTGTATACACTTACATAAAACGCACCAAATAATTTCAAAAAAACGACATTTCGCCCTATTCCGGTGCGATTGCTTCTTGGTACATTCCT > NC_002947/788449‑788732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |