BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	861,659	C→A	7.3%	G36C (GGC→TGC)	PP_0742 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	861,659	0	C	A	7.3%	341.5 / 11.0	109	G36C (GGC→TGC)	PP_0742	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (47/54); new base A (4/4); total (51/58)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.11e-01

Only 100 of 113 total aligned reads displayed.

CAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTACGCTGTCAGG  >  NC_002947/861510‑861808

cAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGcc                                                                                                                                                        <  2:2250684/150‑1 (MQ=255)

   ttGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑Tg                                                                                                                                                    <  2:529799/150‑1 (MQ=255)

   ttGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑Tg                                                                                                                                                    >  1:2352356/1‑150 (MQ=255)

   ttGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑Tg                                                                                                                                                    >  1:346713/1‑150 (MQ=255)

   ttGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑Tg                                                                                                                                                    >  2:871084/1‑150 (MQ=255)

      gggTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGcc                                                                                                                                                 >  2:2317908/1‑150 (MQ=255)

        gTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCtt                                                                                                                                               >  2:860772/1‑150 (MQ=255)

           tCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCATGTCGGGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGt                                                                                                                                            <  2:1157466/150‑1 (MQ=255)

           tCCACCGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGt                                                                                                                                            <  1:822785/150‑1 (MQ=255)

            ccACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTc                                                                                                                                           <  2:346713/150‑1 (MQ=255)

            ccACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTc                                                                                                                                           <  1:454068/150‑1 (MQ=255)

              aCTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGa                                                                                                                                         >  2:2294085/1‑150 (MQ=255)

               cTGCTCGTCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCTCAGGTCGAGCGCGCCGGCTTCCCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGaa                                                                                                                                        <  2:1227532/150‑1 (MQ=255)

               cTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGaa                                                                                                                                        <  1:2336167/150‑1 (MQ=255)

                  cTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACaa                                                                                                                                     >  1:2081762/1‑150 (MQ=255)

                       cccAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCa                                                                                                                                <  1:2335014/150‑1 (MQ=255)

                       cccAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCAG‑TGGCCTTTGTCGAACAAGTGCa                                                                                                                                >  2:2075608/1‑150 (MQ=255)

                       cccAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCAG‑TGGCCTTTGTCGAACAAGTGCa                                                                                                                                >  2:2071357/1‑150 (MQ=255)

                           gCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGa                                                                                                                            <  2:2351363/150‑1 (MQ=255)

                             cggcggCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGAtt                                                                                                                          <  1:843467/150‑1 (MQ=255)

                             cggcggCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGAGAGACAGATTCGCTGCGCTTACTGGCTATGCACCGGCTATTCCCG‑GGTGCTTTTTCGGTCTAGTGCACGGAtt                                                                                                                          <  2:25273/150‑1 (MQ=255)

                                  gcCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGTTTGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCg                                                                                                                     <  2:1521296/150‑1 (MQ=255)

                                  gcCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCCGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTTCCG‑TGGGCTTGGTCGAACAAGTGCACGGATTGCCCg                                                                                                                     >  1:1114389/1‑150 (MQ=255)

                                  gcCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGCCCGCTGGTTTGTTCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCg                                                                                                                     <  2:664796/150‑1 (MQ=255)

                                    cACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAg                                                                                                                                    <  1:1681838/133‑1 (MQ=255)

                                    cACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAg                                                                                                                                    >  2:1681838/1‑133 (MQ=255)

                                    cACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGc                                                                                                                   >  2:363045/1‑150 (MQ=255)

                                         aTTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACaa                                                                                                                                     >  2:1953974/1‑127 (MQ=255)

                                         aTTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACaa                                                                                                                                     <  1:1953974/127‑1 (MQ=255)

                                         aTTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCt                                                                                                              >  1:1691059/1‑150 (MQ=255)

                                             ctgcACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCaa                                                                                                          <  1:1296126/150‑1 (MQ=255)

                                               gcACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAgg                                                                                                        >  1:1262312/1‑150 (MQ=255)

                                               gcACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAg                                                                                                         <  1:1853691/149‑1 (MQ=255)

                                               gcACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAg                                                                                                         >  2:1853691/1‑149 (MQ=255)

                                                cACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGc                                                                                                       <  1:1185105/150‑1 (MQ=255)

                                                cACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCC‑CTGTCGCCCGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGc                                                                                                       >  2:664132/1‑150 (MQ=255)

                                                 aCCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAg                                                                                                         <  1:2348057/147‑1 (MQ=255)

                                                        cgacgaAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGggcgg                                                                                               <  2:2068254/150‑1 (MQ=255)

                                                          acgaAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGCTATCCCGGCCTTCTGCAAGGCCTGGGCGGCt                                                                                             <  1:664132/150‑1 (MQ=255)

                                                            gaAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGcc                                                                                                                       >  1:969453/1‑122 (MQ=255)

                                                            gaAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGcc                                                                                                                       <  2:969453/122‑1 (MQ=255)

                                                             aaGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGAc                                                                                          <  2:845356/150‑1 (MQ=255)

                                                                  tCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAAcc                                                                                     >  2:578960/1‑150 (MQ=255)

                                                                    ggTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCgg                                                                                   <  2:941801/150‑1 (MQ=255)

                                                                     gTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGc                                                                                  >  1:1912234/1‑150 (MQ=255)

                                                                      tCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCg                                                                                 >  2:428282/1‑150 (MQ=255)

                                                                          gggCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGc                                                                             >  2:2346464/1‑150 (MQ=255)

                                                                          gggCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGc                                                                             <  1:871084/150‑1 (MQ=255)

                                                                            gCAGTGAAGTACTGTGCGCACAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCg                                                                           <  1:531250/150‑1 (MQ=255)

                                                                               gTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCTTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGcc                                                                        >  2:2255980/1‑150 (MQ=255)

                                                                                  aaGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCg                                                                     >  1:2163643/1‑150 (MQ=255)

                                                                                   aGTACTGTGCGCCCAGGTCGAGCACGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCga                                                                    <  2:2085898/150‑1 (MQ=255)

                                                                                       cTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCgatgat                                                                <  2:2402865/150‑1 (MQ=255)

                                                                                        tgtgCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGatgatg                                                               <  1:1661594/150‑1 (MQ=255)

                                                                                        tgtgCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCAGTCCCCGatgatg                                                               >  1:1566539/1‑150 (MQ=255)

                                                                                        cgagctgccAGGCCGTGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGatgatg                                                               <  1:636577/143‑1 (MQ=255)

                                                                                         gtgCGCCTAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATgg                                                              <  1:1077494/150‑1 (MQ=255)

                                                                                            cgcCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGcta                                                           <  1:2443506/150‑3 (MQ=255)

                                                                                              cccAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATa                                                         >  2:556545/1‑150 (MQ=255)

                                                                                                 aGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCt                                                                                                              >  2:896557/1‑94 (MQ=255)

                                                                                                 aGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCt                                                                                                              <  1:896557/94‑1 (MQ=255)

                                                                                                        gcgcgcCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCAG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCa                                               <  1:2075608/150‑1 (MQ=255)

                                                                                                        gcgcgcCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCAG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCa                                               <  1:2071357/150‑1 (MQ=255)

                                                                                                               ggCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGc                                        <  1:2161372/150‑1 (MQ=255)

                                                                                                               ggCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGc                                        <  1:2346464/150‑1 (MQ=255)

                                                                                                                gCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGcc                                       <  1:363045/150‑1 (MQ=255)

                                                                                                                  ttCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCctc                                     >  2:945602/1‑150 (MQ=255)

                                                                                                                     gCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTc                                  >  2:679913/1‑150 (MQ=255)

                                                                                                                     gCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTc                                  >  1:2133585/1‑150 (MQ=255)

                                                                                                                     gCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTc                                  <  1:428282/150‑1 (MQ=255)

                                                                                                                       tGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAg                                                        >  2:284248/1‑126 (MQ=255)

                                                                                                                       tGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAg                                                        <  1:284248/126‑1 (MQ=255)

                                                                                                                       tGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCaa                                <  1:3989/150‑1 (MQ=255)

                                                                                                                            ttGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCtt                           <  1:1659771/150‑1 (MQ=255)

                                                                                                                            ttGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCtt                           >  1:418957/1‑150 (MQ=255)

                                                                                                                              gCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGc                         >  1:1028146/1‑150 (MQ=255)

                                                                                                                                 ggCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCtgt                      <  2:179938/150‑1 (MQ=255)

                                                                                                                                  gCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAAc                                                                                      >  1:1688136/1‑85 (MQ=255)

                                                                                                                                  gCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCTGCCCCGATGATGGGGATAGGTACGGTCATGATGGCCTCTAAAAATCTTGCtgtg                     >  1:491971/1‑150 (MQ=255)

                                                                                                                                  gCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCtgtg                     >  2:544966/1‑150 (MQ=255)

                                                                                                                                  gCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCtgtg                     >  1:1619027/1‑150 (MQ=255)

                                                                                                                                   ccATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGa                    <  1:544966/150‑1 (MQ=255)

                                                                                                                                   ccATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGa                    <  1:2317908/150‑1 (MQ=255)

                                                                                                                                    cATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAg                   >  2:238155/1‑150 (MQ=255)

                                                                                                                                     aTGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCtgt                      <  1:2180543/146‑1 (MQ=255)

                                                                                                                                     aTGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGAGAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGc                  >  2:1765458/1‑150 (MQ=255)

                                                                                                                                     aTGCGACCGCCCCTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCtgt                      >  2:2180543/1‑146 (MQ=255)

                                                                                                                                      tGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCa                 >  2:1255546/1‑150 (MQ=255)

                                                                                                                                         gcccgccACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGAc              <  2:1691059/150‑1 (MQ=255)

                                                                                                                                         aaaggccACGGCAG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGAc              >  2:535881/5‑150 (MQ=255)

                                                                                                                                          aaggccACGGCAG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACt             >  1:258944/4‑150 (MQ=255)

                                                                                                                                           aggccACGGCAG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTa            <  1:535881/148‑1 (MQ=255)

                                                                                                                                              ccACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGGAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGGTGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTACGc         <  2:1262312/150‑1 (MQ=255)

                                                                                                                                                 cTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTACGCTGt      >  1:666770/1‑150 (MQ=255)

                                                                                                                                                  tGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTACGCt        <  1:1529229/147‑1 (MQ=255)

                                                                                                                                                  tGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTACGCt        >  2:1529229/1‑147 (MQ=255)

                                                                                                                                                  tGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTACGCTGTc     <  1:1255546/150‑1 (MQ=255)

                                                                                                                                                   gCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTACGCTGTCa    <  2:1619027/150‑1 (MQ=255)

                                                                                                                                                    ccG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTACGCTGTCAg   <  1:860772/150‑1 (MQ=255)

                                                                                                                                                     cG‑TGGCCTTTGTCGAACAAGGGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGAGGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTACGCTGTCAgg  <  1:817454/150‑1 (MQ=255)

CAGTTGGGGTTTCCACTGCTCGGCCCAGCCGGCGGCCACCCATTGCTGCACCTGATCGACGAAGCGTCGGTCACGGGCAGTGAAGTACTGTGCGCCCAGGTCGAGCGCGCCGGCTTCGCTGCGCTTGCTGGCCATGCGCCCGCCACTGCCG‑TGGCCTTTGTCGAACAAGTGCACGGATTGCCCGGCCTTCTGCAAGGCCTGGGCGGCTGACAAACCGGCGATGCCGGCCCCGATGATGGCGATAGGTACTGTCATGATGGCCTCTTCAAACCTTGCTGTGAGCAGACTACGCTGTCAGG  >  NC_002947/861510‑861808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`