| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 868,013 | G→C | 7.3% | intergenic (+108/+69) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 868,013 | 0 | G | C | 7.3% | 420.1 / 18.6 | 136 | intergenic (+108/+69) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (55/71); new base C (4/6); total (59/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 | |||||||||||
Only 100 of 141 total aligned reads displayed.
CCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACA > NC_002947/867866‑868161 | aGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACa < 2:843093/150‑1 (MQ=255) tACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAgg < 2:422880/150‑1 (MQ=255) tACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAgg < 2:166516/150‑1 (MQ=255) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGTCTCTTCGCGGGCGCGCCCGCTACCACAGGAGTCGCGCCGCACCTGCGGGCATAACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGCGGGCGGTACAGGCTg > 2:1231061/1‑150 (MQ=255) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTg > 1:2034936/1‑150 (MQ=255) aTCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTg > 2:159403/1‑150 (MQ=255) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 1:1071006/150‑1 (MQ=255) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 2:1035611/150‑1 (MQ=255) tCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGa < 2:1486103/150‑1 (MQ=255) gagaTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTCCAGGCTGATc < 2:693783/150‑1 (MQ=255) gagaTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATc < 1:1437013/150‑1 (MQ=255) gagaTCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGAGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGCGCCGAGAACAACGTGGGGTCAGTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATc > 1:1125180/1‑150 (MQ=37) tcatcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgc < 2:1674888/150‑1 (MQ=255) catcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCACACATGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCGGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgcg > 1:426977/1‑150 (MQ=255) atcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAgcgc > 1:74737/1‑150 (MQ=255) tcGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGcc < 1:2045513/150‑1 (MQ=255) gATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAg < 1:333228/150‑1 (MQ=255) tAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGc < 1:2187891/150‑1 (MQ=255) aGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGaaca > 2:821921/1‑150 (MQ=255) gCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaa < 1:1619744/150‑1 (MQ=255) ccGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaaa > 2:214726/1‑150 (MQ=255) gTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGTGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaaaaa > 2:2036235/1‑150 (MQ=255) gTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACaaaaaa < 1:159403/150‑1 (MQ=255) tGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGTAGCGGGCATGCCCGCGACGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGccc > 2:73815/1‑150 (MQ=255) tGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGccc > 1:637339/1‑150 (MQ=255) tGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGccc > 1:549607/1‑150 (MQ=255) gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAggg > 1:953547/1‑150 (MQ=255) gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGATCCCAGAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAggg < 2:786691/150‑1 (MQ=255) aGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGc > 1:1975194/1‑150 (MQ=255) cAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGACCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑tt < 1:784114/150‑1 (MQ=255) aGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCG‑ttt < 2:969987/150‑1 (MQ=255) ccGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAggg < 1:2190272/95‑1 (MQ=255) ccGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAggg > 2:2190272/1‑95 (MQ=255) ccGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGc < 2:74737/150‑1 (MQ=255) ggCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGt < 1:1590674/150‑1 (MQ=255) ggCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGt < 2:1967628/150‑1 (MQ=255) ctctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGcggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcat < 2:472037‑M2/150‑61 (MQ=255) tctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCa > 2:8904/1‑150 (MQ=255) ctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAg < 2:1977449/150‑1 (MQ=255) ttCGCTCGCGCGCCCGCTCCCACAGGCGACGCGCGGCACCTGCGGGCATTACCGAACCTGTTGTAGCGGGCATGCCCGCGCAGAGGGCGGTACCGGCAGAGCAAGCGCAAGCAACTTACATGGCCCCAAGGGTCG‑TTGATGCGTTTCAGa > 2:1453968/1‑150 (MQ=255) gcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTaa > 2:1087405/1‑150 (MQ=255) gcgcCCGCCCCGACAGGAGTCGCGCCGTACCTGCGGCCATTACCAAACCTGTGGGAGCGAGCATGCCCGCGAAGAGGGTGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTaa < 1:884617/150‑1 (MQ=255) GCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTaa > 2:802967‑M1/1‑148 (MQ=255) GCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTaa < 1:802967‑M1/148‑1 (MQ=255) cccGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCcggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaa < 1:699291‑M2/150‑76 (MQ=255) ccGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCAGGCATGCCCGCGAAGAGGCcggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcg > 1:2239546‑M2/1‑74 (MQ=255) ccGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCAGGCATGCCCGCGAAGAGGCcggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcg < 2:2239546‑M2/145‑72 (MQ=255) CCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGt < 1:2107110‑M1/150‑1 (MQ=255) CGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTa > 1:8904‑M1/1‑150 (MQ=255) CGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCGTAAGCGTa < 1:126947‑M1/150‑1 (MQ=255) gctcccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCATACCGGCTTAAGCGTAg > 2:551608‑M2/57‑150 (MQ=255) CTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGt < 2:2328369‑M1/150‑1 (MQ=255) tcccacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTg > 2:1347357‑M2/55‑150 (MQ=255) ccACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCcggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctc < 2:1314802‑M2/150‑83 (MQ=255) cacaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑CTTTTGCGTTTCTGATCGGCTTAAGCGTAGTGCtt > 2:1722478‑M2/52‑150 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt > 1:2416229‑M1/1‑150 (MQ=255) CACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCtt < 1:772394‑M1/150‑1 (MQ=255) acaggttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTg > 2:535383‑M2/51‑150 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCcggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcga < 2:134777‑M2/150‑85 (MQ=255) ACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGGAGTGCTTg < 2:1316288‑M1/150‑1 (MQ=255) gttcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcGCGACCGCGAAGAGGCCGGCACTGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGgcc > 1:1635093‑M2/47‑150 (MQ=255) GAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAg < 1:7649‑M1/80‑1 (MQ=255) GAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAg > 2:7649‑M1/1‑80 (MQ=255) tcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGc > 1:2056384‑M2/45‑115 (MQ=255) tcggtaatgcccgcaggtgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGc < 2:2056384‑M2/71‑1 (MQ=255) gcgcCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCggg < 1:178379/150‑1 (MQ=255) cTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctctct > 1:360792/1‑150 (MQ=255) tGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTg > 2:2405250/1‑150 (MQ=255) tgcggcgcgactcctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAg < 1:1347357‑M2/123‑1 (MQ=255) ggCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAg < 1:1087405/150‑1 (MQ=255) ggCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAg < 1:2012627/150‑1 (MQ=255) ggCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCcggcactggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcgacgaaggtcttgccgtgctcgtcc > 1:134777‑M2/1‑43 (MQ=255) gccttACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgc < 2:1216642/133‑1 (MQ=255) gCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGgc > 1:1216642/1‑136 (MQ=255) cATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCatgt > 1:327167/1‑147 (MQ=255) aTTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGcggtacaggctacagatcagccacgggctttatcgatgatctcgatgtactcaggggcattgcgctggtcggcaatctgctcgacgaaggtcttgccgtgctcgtccttg > 2:359034‑M2/1‑40 (MQ=255) aTTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTc > 1:2107251/1‑150 (MQ=255) ccGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGTTCCAgg < 2:951683/150‑1 (MQ=255) ccGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAgg < 2:772420/150‑1 (MQ=255) cctgtgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCcgc < 1:1976918‑M2/135‑1 (MQ=255) ctgtgggagcggggATGCCCGCGAAGAGGGCGGTCCAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGACG‑CTTTTGCGTGTCAGACCGGCTTAAGCGTAGTGCTTGGTAGCCGGCCTGCTCTCTGCCAGGTCCAGGGCcgcg > 2:602167‑M2/15‑150 (MQ=255) tgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTaa < 2:988180‑M2/88‑1 (MQ=255) tgggagcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTaa > 1:988180‑M2/12‑99 (MQ=255) ttcgcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAgggg > 1:2295240‑M2/10‑71 (MQ=255) ttcgcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAgggg < 2:2295240‑M2/62‑1 (MQ=255) ttcgcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGtt > 1:798043‑M2/10‑150 (MQ=255) ggcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAACCGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTAt < 1:1722478‑M2/143‑1 (MQ=255) agcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTAt < 1:214726‑M2/143‑1 (MQ=255) gcgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATc < 2:2107110‑M2/144‑1 (MQ=255) cgggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCg < 1:1851353‑M2/145‑1 (MQ=255) ggtaaTGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGc < 2:1594000/90‑1 (MQ=255) gggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTgg < 2:639744‑M2/101‑1 (MQ=255) gggcATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTgg > 1:639744‑M2/5‑105 (MQ=255) gAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAg > 2:1344867/1‑81 (MQ=255) gAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTtgt > 2:56364/1‑150 (MQ=255) aaGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTtgtg < 2:1125180/150‑1 (MQ=255) gagGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGt < 1:860283/150‑1 (MQ=255) gggCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTAc > 2:406653/1‑150 (MQ=255) ggCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACa > 1:1358982/1‑150 (MQ=255) ggCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACa < 2:1975194/150‑1 (MQ=255) | CCCTGAGTACATCGAGATCATCGATAAAGCCCGTGGCTGATCTGTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCG‑TTTTTGCGTTTCAGACCGGCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACA > NC_002947/867866‑868161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |