Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 868,518 T→C 5.9% K358R (AAG→AGG)  mqo‑I ← malate:quinone oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947868,5180TC 5.9% 406.6 / 9.0 135K358R (AAG→AGG) mqo‑Imalate:quinone oxidoreductase
Reads supporting (aligned to +/- strand):  ref base T (62/65);  new base C (3/5);  total (65/70)
Fisher's exact test for biased strand distribution p-value = 7.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01

Only 100 of 140 total aligned reads displayed.

CGCCGCCTTTTTTCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAACAGCAGCGAAGTCTTGCCG  >  NC_002947/868369‑868667
                                                                                                                                                     |                                                                                                                                                     
cgccgcCTTTTTTCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACt                                                                                                                                                       <  2:1391255/150‑1 (MQ=255)
 gccgccTTTTTTCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCTCTGACCAGGTACtt                                                                                                                                                      >  2:575112/1‑150 (MQ=255)
 gccgccTTTTTTCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACtt                                                                                                                                                      >  1:369459/1‑150 (MQ=255)
 gccgacTTTCTTAGGGTCTTCCTCGGGGGTCTGCCCCAGTTGGCCCTCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACtt                                                                                                                                                      >  2:1594119/1‑150 (MQ=255)
  ccgccTTTTTTCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTg                                                                                                                                                     <  2:566954/150‑1 (MQ=255)
    gccTTTTTTCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGt                                                                                                                                                   >  1:1681810/1‑150 (MQ=255)
     ccTTTTTTCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTc                                                                                                                                                  >  1:762291/1‑150 (MQ=255)
      cTTTTTTCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCa                                                                                                                                                 >  1:196701/1‑150 (MQ=255)
      cTTTTTTCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCa                                                                                                                                                 >  2:1059327/1‑150 (MQ=255)
       ttttttCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTGCTTGGTCAg                                                                                                                                                <  1:211454/150‑1 (MQ=255)
       ttttttCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAg                                                                                                                                                <  1:848284/150‑1 (MQ=255)
       ttttttCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTACCAGGTGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAg                                                                                                                                                >  1:2367549/1‑150 (MQ=255)
             cGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCAt                                                                                                                                          <  1:466983/150‑1 (MQ=255)
             cGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCAt                                                                                                                                          <  2:1247203/150‑1 (MQ=255)
                 tctttcttGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCAtgttg                                                                                                                                      >  1:312602/1‑150 (MQ=255)
                       ttGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCgg                                                                                                                                <  1:2393527/150‑1 (MQ=255)
                       ttGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCgg                                                                                                                                >  1:843589/1‑150 (MQ=255)
                         gatgatCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCgg                                                                                                                                >  1:159643/1‑148 (MQ=255)
                         gatgatCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCgg                                                                                                                                <  2:159643/148‑1 (MQ=255)
                         gatgatCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGc                                                                                                                              >  1:1827322/1‑150 (MQ=255)
                           tgatCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCa                                                                                                                            >  1:1815375/1‑150 (MQ=255)
                            gatCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCa                                                                                                                                                 >  2:1565617/1‑128 (MQ=255)
                                   aCGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGACATGAACTACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGc                                                                                                                    >  1:1356613/1‑150 (MQ=255)
                                     gcgcTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCAt                                                                                                                  <  1:293078/150‑1 (MQ=255)
                                     gcgcTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCAt                                                                                                                  >  1:443061/1‑150 (MQ=255)
                                         tGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGTGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCggg                                                                                                              >  1:2262854/1‑150 (MQ=255)
                                         tGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCggg                                                                                                              <  2:1827322/150‑1 (MQ=255)
                                             ccGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGAGGCGAGCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGa                                                                                                          >  1:747785/1‑150 (MQ=255)
                                             ccGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGa                                                                                                          >  1:1042815/1‑150 (MQ=255)
                                             ccGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGa                                                                                                          <  1:2381636/150‑1 (MQ=255)
                                              cGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAAGTACCTGGt                                                                                                                                                   >  1:2322634/1‑108 (MQ=255)
                                              cGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAAGTACCTGGt                                                                                                                                                   <  2:2322634/108‑1 (MQ=255)
                                               gCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATg                                                                                                        >  2:1584843/1‑150 (MQ=255)
                                               gCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATg                                                                                                        >  1:1323181/1‑150 (MQ=255)
                                                 cACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGtt                                                                                                      <  2:312602/150‑1 (MQ=255)
                                                  aCTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCgg                                                                                                               <  2:1166663/140‑1 (MQ=255)
                                                  aCTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCgg                                                                                                               >  1:1166663/1‑140 (MQ=255)
                                                       cAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCTAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCAt                                                                                                >  2:913817/1‑150 (MQ=255)
                                                          gcgcCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATgcg                                                                                             >  1:2263808/1‑150 (MQ=255)
                                                            gcCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCACGGCTTCCAGACGCTGCTCCATCGCCTGCATCACTTCGCTGACCAGGTCCTTGGTCAGGTCCATGTTGTCGCGGTCCACGGCCAGCATCGGGCCGATTTtgcccatgccca                                                                                           >  1:1153212/1‑150 (MQ=255)
                                                                gTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGa                                                                                       <  2:2441628/150‑1 (MQ=255)
                                                                  ccTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACa                                                                                     <  1:2055136/150‑1 (MQ=255)
                                                                   cTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGAGGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGGCCATGCGCACCGACAg                                                                                    >  2:1088772/1‑150 (MQ=255)
                                                                    tCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGc                                                                                   >  1:2345663/1‑150 (MQ=255)
                                                                    tCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCAACGGGCCGATGTTGCCCATGCGCACCGACAGc                                                                                   >  2:1424297/1‑150 (MQ=255)
                                                                      ggCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCa                                                                                           >  2:90716/1‑140 (MQ=255)
                                                                      ggCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCa                                                                                           <  1:90716/140‑1 (MQ=255)
                                                                       gCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATAGACTGCATCCCTCCGCTGACCAGGTACTTGGCCAGATCCATGGTGTCGCGTTCCATGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGc                                                                                <  2:2103213/150‑1 (MQ=255)
                                                                        ccTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCAt                                                                                                                                          >  1:1496710/1‑91 (MQ=255)
                                                                        ccTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCa                                                                               >  1:2219903/1‑150 (MQ=255)
                                                                        ccTTGGCCGGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCACGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCa                                                                               <  1:701463/150‑1 (MQ=255)
                                                                          ttGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACa                                                                                     >  1:898594/1‑142 (MQ=255)
                                                                            ggCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTc                                                                           <  2:2219903/150‑1 (MQ=255)
                                                                               cTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCCCCGACAGCGGCAGGTGCAt                                                                        >  2:887705/1‑150 (MQ=255)
                                                                                  cGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCAtg                                                                                                                                         >  1:1761263/1‑82 (MQ=255)
                                                                                   ggATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGc                                                                    <  2:2025472/150‑1 (MQ=255)
                                                                                        gAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGcc                                                               <  1:1059327/150‑1 (MQ=255)
                                                                                        gAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGcc                                                               <  2:1942468/150‑1 (MQ=255)
                                                                                           acgacgCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTg                                                            >  2:353759/1‑150 (MQ=255)
                                                                                                gCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGCCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGa                                                       <  1:1942483/150‑1 (MQ=255)
                                                                                                  aGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGc                                                                                                             >  1:1221314/1‑94 (MQ=255)
                                                                                                       ttCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACtt                                                >  2:637277/1‑150 (MQ=255)
                                                                                                       tcccATACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACtt                                                >  2:1174535/3‑150 (MQ=255)
                                                                                                         ccAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTgg                                              <  2:747785/150‑1 (MQ=255)
                                                                                                          ccgccgttgctCTATAGAATGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCAGATGTTGCCCATACGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGt                                             <  2:1323181/143‑1 (MQ=255)
                                                                                                          cAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGt                                             >  1:950343/1‑150 (MQ=255)
                                                                                                              cGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTg                                         <  2:196701/150‑1 (MQ=255)
                                                                                                                 tgctCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGaaa                                      >  1:1875884/1‑150 (MQ=255)
                                                                                                                     ccATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCgg                                  <  2:2263808/150‑1 (MQ=255)
                                                                                                                      cATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGc                                                                    >  1:1493589/1‑115 (MQ=255)
                                                                                                                      cATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGc                                                                    <  2:1493589/115‑1 (MQ=255)
                                                                                                                      cATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGc                                 >  1:2149872/1‑150 (MQ=255)
                                                                                                                       aTCGACTGCATCACTTCGGTGTCCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCa                                <  1:1944812/150‑1 (MQ=255)
                                                                                                                       aTCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCa                                <  2:843589/150‑1 (MQ=255)
                                                                                                                           aCTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTg                                               <  1:1066983/131‑1 (MQ=255)
                                                                                                                           aCTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTg                                               >  2:1066983/1‑131 (MQ=255)
                                                                                                                             tGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTgg                                              <  1:593836/130‑1 (MQ=255)
                                                                                                                              gCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGAc                         <  1:1765926/150‑1 (MQ=255)
                                                                                                                               cATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTg                                               <  2:2072133/127‑1 (MQ=255)
                                                                                                                               cATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTg                                               >  1:2072133/1‑127 (MQ=255)
                                                                                                                                aTCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATg                                                                                                        >  2:78057/1‑69 (MQ=255)
                                                                                                                                 tCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGt                                             >  2:1248232/1‑127 (MQ=255)
                                                                                                                                   aCTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAAc                    >  2:1360861/1‑150 (MQ=255)
                                                                                                                                    cTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCa                                                                      >  2:1720950/1‑99 (MQ=255)
                                                                                                                                    cTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAAca                   <  1:1174535/150‑1 (MQ=255)
                                                                                                                                    cTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAAca                   >  2:2045153/1‑150 (MQ=255)
                                                                                                                                     ttCCCTGCCCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGACCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAAcag                  <  1:1455134/150‑1 (MQ=255)
                                                                                                                                       cGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAAcagca                <  1:913817/150‑1 (MQ=255)
                                                                                                                                       cGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAAcagca                <  1:575112/150‑1 (MQ=255)
                                                                                                                                        gCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGGAGTGAAACCGGCATACTGACCGAAcagcag               >  2:1724333/1‑150 (MQ=255)
                                                                                                                                         cTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAACagcagc              <  2:2345663/150‑1 (MQ=255)
                                                                                                                                           gACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCACATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCAACAATGTGACCGAACAGCAGCGa            >  1:121984/1‑150 (MQ=255)
                                                                                                                                              caagTACCTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTg                                         <  1:1579818/115‑1 (MQ=255)
                                                                                                                                              caagTACCTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTg                                         <  1:1579878/115‑1 (MQ=255)
                                                                                                                                              caagTACCTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTg                                         >  2:1579818/4‑118 (MQ=255)
                                                                                                                                              cAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTa                                            >  1:1685483/1‑115 (MQ=255)
                                                                                                                                               aGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTACTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAACAGCAGCGAAGTc        >  2:2157560/1‑150 (MQ=255)
                                                                                                                                                ggTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAACAGCAGCGAAGTCt       <  2:1875884/150‑1 (MQ=255)
                                                                                                                                                  tACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAACAGCAGCGAAGTCTTg     <  1:931363/150‑1 (MQ=255)
                                                                                                                                                     ttGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAACAGCAGCGAAGTCTTGCCg  >  2:1236904/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CGCCGCCTTTTTTCGGGTCTTTCTTGATGATCTGCACGCGCTGACCCGCCACTTCCAGGCGCCAGTCCTCGGCCTTGGCCTGCGGATAGAAACGACGCAGGGCTTCCAGACGCTGCTCCATCGACTGCATCACTTCGCTGACCAGGTACTTGGTCAGGTCCATGTTGTCGCGGGCCACGGCCAGCATCGGGCCGATGTTGCCCATGCGCACCGACAGCGGCAGGTCCATCAGCGAGCCGTGCTTGAGGAACTTGGTAGTGAAACCGGCATACGGACCGAACAGCAGCGAAGTCTTGCCG  >  NC_002947/868369‑868667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑