| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 972,121 | T→A | 7.6% | L137Q (CTG→CAG) | secD → | protein translocase subunit SecD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 972,121 | 0 | T | A | 7.6% | 355.5 / 15.1 | 119 | L137Q (CTG→CAG) | secD | protein translocase subunit SecD |
| Reads supporting (aligned to +/- strand): ref base T (54/56); new base A (6/3); total (60/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.47e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
GCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCTGACGATGCCACCC > NC_002947/971972‑972270 | gccagccaAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTTCCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCctgct < 1:2162594/150‑1 (MQ=255)gccagccaAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCctgct < 2:13521/150‑1 (MQ=255)gccagccaAGGATGTAGTGCGCAAGGAACTAGGCGACGACCACCTAGAGCTACACAACCTGGCCCAGACTTCCCCGCAATGGCTGCGCAACCTGCGCGCAAGCCCGATGAAAATGGGACTGTCCCTGTCCCGTGGTGTTCACTTCcttct < 2:2366040/150‑1 (MQ=255) gccaAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGaa < 2:1214671/150‑1 (MQ=255) aaGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGtg > 1:1987116/1‑150 (MQ=255) ggATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTCCACTTCCAGCAGGAAGtgca < 2:2397136/150‑3 (MQ=255) gTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGtggacatggac > 1:141022/1‑150 (MQ=255) gTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGtggacatggac < 1:705174/150‑1 (MQ=255) ggCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCAt < 2:908745/150‑1 (MQ=255) cACTGGGCGATGATTACGTAGTGGACCTGAACATGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCCGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGa < 2:981123/150‑1 (MQ=255) aCTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGaa > 1:916673/1‑127 (MQ=255) aCTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGAc > 1:212565/1‑150 (MQ=255) tGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTg > 1:1697624/1‑150 (MQ=255) tGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTg < 1:527633/150‑1 (MQ=255) ggCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGACACTGGGCCTGGACCTGTCCGGTGCTGTGCACTTCCTGCTGGAAGTGGTCTTGGTCAAGGCCATGACTGcc > 2:1455741/1‑150 (MQ=255) cagtgatTTCGTCTTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGAGGACATGGACAAGGCCATGACTGCCCg > 2:1274344/4‑150 (MQ=255) gatgatTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCctgct > 1:306639/1‑116 (MQ=255) gatgatTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCctgct < 2:306639/116‑1 (MQ=255) ttACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGaa > 1:656707/1‑150 (MQ=255) tacttggtGGCCCTCAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGaaa < 2:656707/144‑1 (MQ=255) tACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCGGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGaaa < 1:90979/150‑1 (MQ=255) aCGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGa > 2:770922/1‑147 (MQ=255) aCGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAg > 1:1904070/1‑150 (MQ=255) cgtcgtGGCCCTGAACCTGGCCCAGACTACCCCGCCATGTTTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGt < 1:2343156/150‑1 (MQ=255) cgtcgtGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGt < 1:1647646/150‑1 (MQ=255) cgtGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGAATGACAGTCtc < 2:594936/150‑2 (MQ=255) gtGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTAc < 2:908421/150‑1 (MQ=255) ttccTGACCCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGaa > 2:908853/3‑150 (MQ=255) cccTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAg < 1:764286/150‑1 (MQ=255) ccTGAACCTGGCCCAGACTACCCCGCAATTGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAgg > 1:1146792/1‑150 (MQ=255) ccTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCa > 1:2250796/1‑122 (MQ=255) ccTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCa < 2:2250796/122‑1 (MQ=255) cTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGc < 1:65285/150‑1 (MQ=255) aaCCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAg < 2:1831462/150‑1 (MQ=255) aaCCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAg < 2:141022/150‑1 (MQ=255) aaCCTGGCCCAGACGACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGACGAAACTGGGCCTGGACCTGTCGGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGCAAGTCTACGAAGGCGAg < 2:813377/150‑1 (MQ=255) cccTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGTTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAgg < 1:829750/149‑1 (MQ=255) aCCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAgg < 2:199417/150‑1 (MQ=255) ccTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGt < 1:1033541/150‑1 (MQ=255) ccTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGt < 2:616570/150‑1 (MQ=255) ccTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGt > 1:2014162/1‑150 (MQ=255) ccTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGt < 2:196194/150‑1 (MQ=255) tGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGt < 1:2044013/97‑1 (MQ=255) tGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGt > 2:2044013/1‑97 (MQ=255) ccccGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGa < 1:875097/150‑1 (MQ=255) cccAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGa > 2:889150/1‑150 (MQ=255) gACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTCCACTTCCAGCAGGAAGtgca > 1:964462/1‑91 (MQ=38) gACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTCCACTTCCAGCAGGAAGtgca < 2:964462/93‑3 (MQ=38) tACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTa > 1:2418414/1‑126 (MQ=255) cccGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTgcg > 2:843711/1‑150 (MQ=255) cccGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTgcg > 1:1343778/1‑150 (MQ=255) cccGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTgcg > 1:2310618/1‑150 (MQ=255) ccGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTgcgc > 1:871362/1‑150 (MQ=255) ccGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTgcgc > 1:51595/1‑150 (MQ=255) gCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCaa > 1:1481811/1‑135 (MQ=255) gCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCaa < 2:1481811/135‑1 (MQ=255) cAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCaaa < 2:165754/150‑1 (MQ=255) cAAGGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCaaa < 1:916863/150‑1 (MQ=255) aaTGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGATGTCAAGACCTTGCTTCGCAAag < 2:1697624/150‑1 (MQ=255) gCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGaa < 2:724472/73‑1 (MQ=255) aaCCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGa > 1:1159725/1‑88 (MQ=255) aaCCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGa < 2:1159725/88‑1 (MQ=255) cTGGGCGCAAGCCCGATGAAACTGTGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTAc > 1:1122730/1‑150 (MQ=255) cTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTAc < 1:889150/150‑1 (MQ=255) gcgcAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCa < 2:51595/150‑1 (MQ=255) gcgcAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCATGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCa > 1:545163/1‑150 (MQ=255) cgcAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAg > 1:2360133/1‑150 (MQ=255) aaGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAACGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAgcct > 2:2413211/1‑150 (MQ=255) ccGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTtgctg < 2:76455/117‑1 (MQ=255) ccGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTtgctg > 1:76455/1‑117 (MQ=255) ccGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAgcctgcct > 2:372154/1‑150 (MQ=255) gATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTcc < 1:1235986/131‑1 (MQ=255) gATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTcc > 2:1235986/1‑131 (MQ=255) gATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTca > 1:6313/1‑150 (MQ=255) aaaCTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTaagcag < 2:6313/150‑1 (MQ=255) ggCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCCCAGCCTGCCTCAGCAGGATggc < 2:212565/150‑1 (MQ=255) ccTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATggcgg > 1:499867/1‑150 (MQ=255) cTGTCCGGTGGTGAGCACTTCCCGCTGGAAGTGGACATGCACAAGGCCATGACTGCCGGCATGAAAGTCTACGAAGGCGACGTCACTACCTCGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGACGGAAGCCGGCCTCATg > 2:696404/1‑150 (MQ=255) tCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGCCAAGGTCAAGACCTTGCACCAAAAAGGGCGTGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTg < 1:2126411/150‑1 (MQ=255) tggtgTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCtt > 2:2402902/1‑150 (MQ=255) gtgtGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCg > 1:1548722/1‑150 (MQ=255) atgtccACTTCCAGCAGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCg > 2:2432470/6‑150 (MQ=255) tgtgCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGc > 1:769677/1‑150 (MQ=255) tgtgCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGc < 1:117959/150‑1 (MQ=255) tgtgCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCCCAGCAGGATGGCGGCATCATGCTGGGCTTCGc < 2:1343778/150‑1 (MQ=255) gtgCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCt > 2:1563812/1‑150 (MQ=255) gtccACTTCCAGCAGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCt > 1:2135841/4‑150 (MQ=255) tgCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTc < 2:1139192/117‑1 (MQ=255) tgCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTc > 1:1139192/1‑117 (MQ=255) gCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCTGa < 2:1987116/150‑1 (MQ=255) ccACTTCCAGCAGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTc > 2:376972/2‑97 (MQ=255) ccACTTCCAGCAGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTc < 1:376972/96‑1 (MQ=255) cACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTcc > 2:1555936/1‑97 (MQ=255) cACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTcc < 1:1555936/97‑1 (MQ=255) cACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTACCCGAAGTAAAGTCTAGTAAGGCGAGGTCGAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCTGAc > 1:1993517/1‑150 (MQ=255) ttCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTTCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCTGACGAt < 2:1147603/150‑1 (MQ=255) ttCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGTAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCTGACGAt > 2:1751028/1‑150 (MQ=255) ttCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCTGACGAt < 2:995038/150‑1 (MQ=255) ccTGCTGGAAGTGGACATGGAGAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGATACCGCAGCCTGCCGCAGCAGGATTGCGGTATCAGTCTTGGCTTCTCTGACGATGc < 2:1207402/150‑1 (MQ=255) ccTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCTGACGATGc < 2:2146871/150‑1 (MQ=255) | GCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTCCTGCTGGAAGTGGACATGGACAAGGCCATGACTGCCCGCATGAAAGTCTACGAAGGCGAGGTCAAGACCTTGCTGCGCAAAGAGCGCGTCCGCTACCGCAGCCTGCCTCAGCAGGATGGCGGCATCATGCTGGGCTTCGCTGACGATGCCACCC > NC_002947/971972‑972270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |