BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,033,806	T→A	7.0%	D141E (GAT→GAA)	PP_0891 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,033,806	0	T	A	7.0%	314.5 / 11.9	100	D141E (GAT→GAA)	PP_0891	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (51/42); new base A (3/4); total (54/46)
Fisher's exact test for biased strand distribution p-value = 7.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.75e-01

Only 100 of 102 total aligned reads displayed.

CCACAGTGAAGGCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCGGTGCTGATCTTCA  >  NC_002947/1033664‑1033954

ccACAGTGAAGGCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCgcg‑gc                                                                                                                                               >  2:1876541/1‑150 (MQ=255)

 cacaGTGAAGGCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCgcg‑gcg                                                                                                                                              >  2:206861/1‑150 (MQ=255)

 cacaGTGAAGGCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCACCTGGA‑AGCgcc‑gcg                                                                                                                                              >  1:1203605/1‑150 (MQ=255)

  acaGTGAAGGCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑gcgc                                                                                                                                             >  2:1471297/1‑150 (MQ=255)

  acaGTGAAGGCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑gcgc                                                                                                                                             >  1:250393/1‑150 (MQ=255)

        aaGGCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAg                                                                                                                                       <  1:1876541/150‑1 (MQ=255)

         aGGCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCAACTTGCATGGCCAGTCGCACAGCTACAATTTCCTGTTGCTGGCCACCCGCCTGGA‑AGCGCC‑GCGCATCCAgg                                                                                                                                      <  1:2124062/150‑1 (MQ=255)

          ggCACAGATCGACCTGCAGCAGATCAGTGCCCTTGCCCTCGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACTCACCTGGA‑AGCGCC‑GCGCATCCAggc                                                                                                                                     <  2:1203605/150‑2 (MQ=255)

           gCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑Tgcgc                                                                                                                                                   >  1:1200890/1‑136 (MQ=255)

           gCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑Tgcgc                                                                                                                                                   <  2:1200890/136‑1 (MQ=255)

             acaGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAggtggt                                                                                                                                  >  1:1176721/1‑150 (MQ=255)

             acaGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAggt                                                                                                                                     >  1:892460/1‑147 (MQ=255)

              caGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGTCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑AGCGCC‑GCGCATCCAggcgggt                                                                                                                                 <  2:1943575/150‑6 (MQ=255)

               aGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGa                                                                                                                                >  2:2388392/1‑150 (MQ=255)

                gATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGAc                                                                                                                               <  2:1417259/150‑1 (MQ=255)

                gATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGAc                                                                                                                               <  2:1446558/150‑1 (MQ=255)

                    gACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGG‑CAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTg                                                                                                                          <  2:185181/150‑1 (MQ=255)

                        tGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGc                                                                                                                       >  1:49169/1‑150 (MQ=255)

                        tGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGc                                                                                                                       >  2:67925/1‑150 (MQ=255)

                           aGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCctc                                                                                                                    <  2:2141330/150‑1 (MQ=255)

                           aGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCctc                                                                                                                    >  2:285328/1‑150 (MQ=255)

                            gCCTATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCctct                                                                                                                   >  2:1603562/1‑150 (MQ=255)

                              cGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTgg                                                                                                                 <  1:1275807/150‑1 (MQ=255)

                                    aTGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑t                                                                                                                                                       >  2:1705339/1‑107 (MQ=255)

                                    aTGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑t                                                                                                                                                       <  1:1705339/107‑1 (MQ=255)

                                     tGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATATCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAggt                                                                                                                                     >  1:1810479/1‑123 (MQ=255)

                                     tGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATATCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAggt                                                                                                                                     <  2:1810479/123‑1 (MQ=255)

                                       aCCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑Tgcgc                                                                                                                                                   <  1:635012/108‑1 (MQ=255)

                                       aCCTGGCCGACGGGGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑Tgcgc                                                                                                                                                   >  2:635012/1‑108 (MQ=255)

                                            gCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGaa                                                                                                   <  1:1603562/150‑1 (MQ=255)

                                                 cGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGAttt                                                                                              <  1:2372426/150‑1 (MQ=255)

                                                   gTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTg                                                                                            >  2:2213438/1‑150 (MQ=255)

                                                   gTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTg                                                                                            <  2:2398109/150‑1 (MQ=255)

                                                    tGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTgg                                                                                           >  2:1617862/1‑150 (MQ=255)

                                                     gCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGc                                                                                          <  1:285328/150‑1 (MQ=255)

                                                       acaGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCtt                                                                                        >  2:2004150/1‑150 (MQ=255)

                                                       acaGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑AGCGCC‑GCGCATCCAggcgg                                                                                                                                   >  2:1777603/1‑104 (MQ=255)

                                                       acaGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑AGCGCC‑GCGCATCCAggcgg                                                                                                                                   <  1:1777603/107‑1 (MQ=255)

                                                         aGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTtgc                                                                                      <  1:1227307/150‑1 (MQ=255)

                                                           aTCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCtt                                                                                                                           >  2:1509782/1‑111 (MQ=255)

                                                           aTCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCtt                                                                                                                           <  1:1509782/111‑1 (MQ=255)

                                                            tagAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTtgctgc                                                                                   <  1:2072513/148‑1 (MQ=255)

                                                                 ttGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCgggg                                                                              >  2:519331/1‑150 (MQ=255)

                                                                        tGCCGCTGCCGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGGGAACCG‑‑GGGAGTGGGTGTTCCCTTCCAGGTGTTGACCATTGAGCCTCTGGTGCTGCCCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGaaa                                                                       <  1:2388392/150‑1 (MQ=255)

                                                                          ccGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGTGTCTAAGGGTCGGCGCGCCGAATATTTTGGCTTGCTGCCGGGGCTGGAAAGc                                                                     <  1:1617862/150‑1 (MQ=255)

                                                                           cGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGcc                                                                    >  1:8520/1‑150 (MQ=255)

                                                                            gCTGACGGTCACCCTGCATGGCCAGTCGCAGAGCGACAATGTCCTGTTGCTGGCCACCCGCCTGGC‑TGGGCG‑GCACTTCTAGGTGGTGAACCTTGCGCTTCTGGTGCTACGAGCCGAAGATTTTGGGTTGATTGCGCGGCTGGCATGCCt                                                                   >  2:1141218/1‑150 (MQ=255)

                                                                            gCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGaaa                                                                       <  1:296276/146‑1 (MQ=255)

                                                                            gCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGaaa                                                                       >  2:296276/1‑146 (MQ=255)

                                                                            gCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCt                                                                   <  2:713373/150‑1 (MQ=255)

                                                                              tGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTgc                                                                 <  1:1162777/150‑1 (MQ=255)

                                                                                  ggTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCaa                                                             <  1:1562919/150‑1 (MQ=255)

                                                                                  ggTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCaa                                                             <  1:67925/150‑1 (MQ=255)

                                                                                    tCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAGGCCTGCGCAAGt                                                           >  2:417401/1‑150 (MQ=255)

                                                                                      aCCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTc                                                         >  2:345606/1‑150 (MQ=255)

                                                                                      aCCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTc                                                         >  2:2056908/1‑150 (MQ=255)

                                                                                       cccTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGGTGCGGCCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCg                                                        >  2:1244769/1‑150 (MQ=255)

                                                                                        ccTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGc                                                       <  1:2177248/150‑1 (MQ=255)

                                                                                        ccTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGc                                                       >  2:777814/1‑150 (MQ=255)

                                                                                        ccTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGc                                                       >  2:1826561/1‑150 (MQ=255)

                                                                                        ccTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGc                                                       >  2:1854301/1‑150 (MQ=255)

                                                                                         cTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGcc                                                      >  1:922297/1‑150 (MQ=255)

                                                                                            cATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAgg                                                   >  2:1974833/1‑150 (MQ=255)

                                                                                             aTGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGt                                                  <  1:1826561/150‑1 (MQ=255)

                                                                                                 ccAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGTGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGaa                                              >  1:160211/1‑150 (MQ=255)

                                                                                                  cAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAg                                             <  1:1832983/150‑1 (MQ=255)

                                                                                                   aGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGt                                            >  1:358560/1‑150 (MQ=255)

                                                                                                       gCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCAt                                        <  2:1176721/150‑1 (MQ=255)

                                                                                                         acaGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCa                                      >  1:1148348/1‑150 (MQ=255)

                                                                                                           aGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAAc                                    <  2:677993/150‑1 (MQ=255)

                                                                                                            gCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAAcc                                   <  1:206861/150‑1 (MQ=255)

                                                                                                             cTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCa                                                     >  2:1363061/1‑131 (MQ=255)

                                                                                                             cTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCa                                                     <  1:1363061/131‑1 (MQ=255)

                                                                                                             cTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAAccc                                  <  2:160211/150‑1 (MQ=255)

                                                                                                              tACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCg                                 >  1:1527196/1‑150 (MQ=255)

                                                                                                              tACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCg                                 >  2:2118378/1‑150 (MQ=255)

                                                                                                               aCAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGt                                <  2:49169/150‑1 (MQ=255)

                                                                                                               aCAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGt                                <  1:777814/150‑1 (MQ=255)

                                                                                                                cAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTc                               >  1:690291/1‑150 (MQ=255)

                                                                                                                   tGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGACTTTAAATCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGt                            >  1:2090924/1‑150 (MQ=255)

                                                                                                                   gacattGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCAt                                        >  2:803015/6‑138 (MQ=255)

                                                                                                                   gacattGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCAt                                        <  1:803015/133‑1 (MQ=255)

                                                                                                                     tCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAAc                                    >  1:467940/1‑140 (MQ=255)

                                                                                                                     tCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAAc                                    <  2:467940/140‑1 (MQ=255)

                                                                                                                       cTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCCTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCg                        >  2:226752/1‑150 (MQ=255)

                                                                                                                                 ccACCCGCCTGGA‑TGCGCG‑GCGCCTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCgg              <  1:226752/150‑1 (MQ=255)

                                                                                                                                  cACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTTCGGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCggg             >  1:159480/1‑149 (MQ=255)

                                                                                                                                  cACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCGGt             >  1:2384137/1‑150 (MQ=255)

                                                                                                                                  cACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCAGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGcc                                                                    >  1:733818/1‑95 (MQ=255)

                                                                                                                                  cACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCAGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGcc                                                                    <  2:733818/95‑1 (MQ=255)

                                                                                                                                  cACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTCGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTTCATCAACCCGTCGGTACCGGTTAGCGCGGt             <  2:1409629/150‑1 (MQ=255)

                                                                                                                                   aCCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCGGTg            >  1:253327/1‑150 (MQ=255)

                                                                                                                                     ccGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTg                                                                                            >  2:2096261/1‑68 (MQ=255)

                                                                                                                                     ccGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTg                                                                                            <  1:2096261/68‑1 (MQ=255)

                                                                                                                                     ccGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCGGTGCt          >  2:1481331/1‑150 (MQ=255)

                                                                                                                                      caccTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCGGTGCTg         >  1:1709166/3‑150 (MQ=255)

                                                                                                                                      cGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCGGTGCTg         <  1:2004150/150‑1 (MQ=255)

                                                                                                                                         cTGGA‑AGCGCC‑GCGCATCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCGGTGCTGATc      >  2:1219275/1‑150 (MQ=255)

                                                                                                                                          tGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGATAAAAGTAATGATAGTTGTTCTCTGTGTCTTGCTGCCGGTGCTGGAAAGCCTGCGCAAGTTCGTCAGTTTGAAGTCCATCAACCCGTCGGTGCCGGTTAGCGCGGTGCTGATCt     >  1:1225886/1‑150 (MQ=255)

                                                                                                                                             a‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCGGTGCTGATCTTCa  >  2:68324/1‑150 (MQ=255)

CCACAGTGAAGGCACAGATCGACCTGCAGCCGATCAATGACCTGGCCGACGGTGCACAGATCGAATTGCGCCTGCCGCTGACGGTCACCCTGCATGGCCAGTCGCACAGCTACAATGTCCTGTTGCTGGCCACCCGCCTGGA‑TGCGCG‑GCGCTTCCAGGTGGTGACCCTTGAGCCTCTGGTGCTGCGCGCCGAAGATTTTGGCTTGCTGCCGGGGCTGGAAAGCCTGCGCAAGTTCGCCAGGTTGAAGTCCATCAACCCGTCGGTACCGGTTAGCGCGGTGCTGATCTTCA  >  NC_002947/1033664‑1033954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`