| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,123,948 | T→A | 6.9% | intergenic (‑143/+78) | PP_mr13 ← / ← gcvT‑I | cspA regulatory region/aminomethyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,123,948 | 0 | T | A | 6.9% | 260.2 / 8.1 | 87 | intergenic (‑143/+78) | PP_mr13/gcvT‑I | cspA regulatory region/aminomethyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (40/40); new base A (3/3); total (43/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.46e-01 | |||||||||||
CAGGTCACGAACTGTTGCGACCCATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCACCTTCTTTCCA > NC_002947/1123802‑1124092 | cAGGTCACGAACTGTTGCGACCCATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCgcctggcctgac > 2:621481/1‑148 (MQ=255) tCACGAACTGTTGCGACCCATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCAGGCCAGGCGCCa < 1:891282/150‑1 (MQ=255) cTGTTGCGACCCATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGACCGAAAAACAAGCGCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGACGCCATGTTCaa > 2:1326783/1‑150 (MQ=255) gTTGCGACCCATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCaaaa < 2:2111135/150‑1 (MQ=255) gTTGCGACCCATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCaaaa < 2:2216214/150‑1 (MQ=255) aCCCATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTAtt < 1:773125/150‑1 (MQ=255) cccATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGATCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCGTCCCTGGCGCCATGTTCAAAAGTTATTg < 1:65731/150‑1 (MQ=255) ccATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTgg > 2:431969/1‑150 (MQ=255) ccATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTgg < 1:1571004/150‑1 (MQ=255) aTGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGCCTGGCAGTCAGTTGGTCGAATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGc > 2:82617/1‑150 (MQ=255) aTGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCAt < 1:1768917/132‑1 (MQ=255) aTGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCAt > 2:1768917/1‑132 (MQ=255) tGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCa > 1:2350449/1‑150 (MQ=255) tGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGCCGCGGGGCCTGGCGCCATGTTCAAAAGTTATTGGGCa < 1:2019062/150‑1 (MQ=255) cAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAgg > 2:465816/1‑150 (MQ=255) aaaCACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGt > 2:1850119/1‑150 (MQ=255) tgACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAata < 2:2350449/150‑1 (MQ=255) gACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAatat > 2:261636/1‑150 (MQ=255) tctACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGaa > 1:1788974/1‑144 (MQ=255) tctACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGaa < 2:1788974/144‑1 (MQ=255) cAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAACACGAATATGTCTAtgctg > 2:823739/1‑150 (MQ=255) ctctCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGccc > 2:1847617/1‑150 (MQ=255) tctcGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCa > 2:209850/1‑150 (MQ=255) tctcGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCa > 2:528156/1‑150 (MQ=255) tcGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCaaa > 1:2261457/1‑150 (MQ=255) cGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCaaaa < 2:2025109/150‑1 (MQ=255) cGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCaaaa < 1:817344/150‑1 (MQ=255) cGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCaaaa < 1:1847617/150‑1 (MQ=255) gAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAatat < 1:1074184/132‑1 (MQ=255) gAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAatat > 2:1074184/1‑132 (MQ=255) gAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAAc > 1:953560/1‑150 (MQ=255) gCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCt > 2:1328752/1‑150 (MQ=255) cGACAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTAGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGATAACCCCTCTGGCCATTTTGCCCAAAACCtt < 2:1403118/150‑1 (MQ=255) aaaaaCAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTca > 1:1831482/1‑150 (MQ=255) aaaaaCAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTca < 1:261636/150‑1 (MQ=255) aaaaaCAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTca > 1:1831860/1‑150 (MQ=255) aaaaaCAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTca < 1:209850/150‑1 (MQ=255) aCAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACaaa > 2:370928/1‑150 (MQ=255) aCAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACaaa < 1:528156/150‑1 (MQ=255) cAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAg > 1:2165950/1‑150 (MQ=255) aaGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGc < 1:1850119/150‑1 (MQ=255) aGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGcc < 2:2129015/150‑1 (MQ=255) ccTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGtt < 2:1831860/150‑1 (MQ=255) ccTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGtt < 2:1831482/150‑1 (MQ=255) cTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGc < 2:199560/145‑1 (MQ=255) cTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGc > 1:199560/1‑145 (MQ=255) cTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGttt > 2:2372629/1‑150 (MQ=255) tCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGACATGGCGCCAGGCCAGGCGCCATgcc < 1:1372529/78‑3 (MQ=37) tCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGACATGGCGCCAGGCCAGGCGCCATgcc > 2:1372529/1‑76 (MQ=38) gAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACaaa > 1:177488/1‑131 (MQ=255) gAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACaaa < 2:177488/131‑1 (MQ=255) gAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGgtag > 2:2286601/1‑150 (MQ=255) aaaaCTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGgtagt > 2:2303049/1‑150 (MQ=255) aaCTGGCGGTGTGCCGATAACCGGCCGGTTTGTCGGAAACGGCATGGCGGCTGGCCTGGGGCCATGTTCAAAAGCTATTGGGCAGGTTCGAAAACGGATATGTCTATACTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGgtagtca > 2:374557/1‑148 (MQ=255) tGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTa > 2:1281998/1‑103 (MQ=255) tGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTa < 1:1281998/103‑1 (MQ=255) ggCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGTCCTGGCGCCATGTTCAAAAGTTATTGGGCATGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACgtg < 2:1231962/150‑1 (MQ=255) cGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACgtgga < 1:2303049/150‑2 (MQ=255) ggTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGgta < 2:1202772/139‑1 (MQ=255) ggTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGgta > 1:1202772/1‑139 (MQ=255) gTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGgtgt > 2:253700/1‑150 (MQ=255) gATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTAt < 2:1290878/92‑1 (MQ=255) gATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTAt > 1:1290878/1‑92 (MQ=255) gATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGaaa < 2:2165950/150‑1 (MQ=255) aTAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAg < 1:2286601/150‑1 (MQ=255) aaCCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGc > 1:1999804/1‑150 (MQ=255) accgaTTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCAtttt > 1:2136983/1‑150 (MQ=255) accgaTTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCAtttt > 1:588563/1‑150 (MQ=255) gaTTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCt < 1:2037701/150‑1 (MQ=255) gaTTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCt < 2:2113270/150‑1 (MQ=255) gaTTTGTCGGAAACGGAATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCt < 1:2063661/150‑1 (MQ=255) tttGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGt > 2:236348/1‑75 (MQ=255) tttGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGt < 1:236348/75‑1 (MQ=255) tttGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGa < 1:1328752/150‑1 (MQ=255) ttGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGAc < 1:1326783/150‑1 (MQ=255) cGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTc < 1:253700/150‑1 (MQ=255) ggAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAAc > 2:2216331/1‑117 (MQ=255) ggAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAAc < 1:2216331/117‑1 (MQ=255) gAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCACAAATTCTGCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGCAAGGCATTTTGCTGACTTTCaa > 2:791039/1‑150 (MQ=255) aaaCGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAg < 1:370928/150‑1 (MQ=255) aCGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGc < 1:465816/150‑1 (MQ=255) ggCATGGCGCCTGGCCGGGCGCCATGTTCAAAAGTTATTGGGCATGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCa < 1:431969/150‑1 (MQ=255) gCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCAc > 1:2310189/1‑150 (MQ=255) acATGGCGCCAGGCCAGGCGCCATGCTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCAc < 1:402417/149‑1 (MQ=255) cATGGCGCCAGGCCAGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCAcc > 1:132559/1‑150 (MQ=255) aTGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCACct > 2:696604/1‑150 (MQ=255) aTGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCACct > 2:842215/1‑150 (MQ=255) aTGGCGCCAGGCCAGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCACct > 1:1158749/1‑150 (MQ=255) gccaggccaggcGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGaaa < 2:1168193/113‑1 (MQ=255) gccaggccagGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGaaa > 1:1168193/1‑117 (MQ=255) caggccaggcGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCACCTTCTTTcc < 2:1158749/148‑1 (MQ=255) tggcctggcGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCACCTTCTTTCCa > 2:308797/1‑150 (MQ=255) | CAGGTCACGAACTGTTGCGACCCATGCAAACACAGTGCAGTGACTCTACGCCAACTCTCGAGCGAAAAACAAGCCCTTGGTCGTATGGAAAACTGGCGGTTTGCCGATAACCGACCGATTTGTCGGAAACGGCATGGCGCCTGGCCTGGCGCCATGTTCAAAAGTTATTGGGCAGGTTCGAAAACGAATATGTCTATGCTGCCCAAAACCTTCACAAAGCCGTTTCAGCCACGGTAGTAACGTGGTGTCACGAAAGGCATTTTGCTGACTTTCAAGGCCACCTTCTTTCCA > NC_002947/1123802‑1124092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |