BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,193,934	T→A	6.4%	L23M (TTG→ATG) ‡	uxpA →	lipoprotein UxpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,193,934	0	T	A	6.4%	321.0 / 9.1	106	L23M (TTG→ATG) ‡	uxpA	lipoprotein UxpA
Reads supporting (aligned to +/- strand): ref base T (53/44); new base A (4/3); total (58/48)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01

Only 100 of 107 total aligned reads displayed.

AATTGCTGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCAC  >  NC_002947/1193790‑1194083

aaTTGCTGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCa                                                                                                                                                  <  1:1960377/150‑1 (MQ=255)

      tGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCAAGGCACCgata                                                                                                                                            <  2:382164/150‑4 (MQ=255)

      tGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCAAGGCACCga                                                                                                                                              >  1:879645/1‑147 (MQ=255)

      tGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCAAGGCACCga                                                                                                                                              <  2:879645/148‑2 (MQ=255)

      tGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGAGATGGCGAGCAGTCTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCgctg                                                                                                                                            >  2:1304469/1‑150 (MQ=255)

       gTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCgctgc                                                                                                                                           >  1:10049/1‑150 (MQ=255)

        tCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGGATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCgctgct                                                                                                                                          >  1:1255956/1‑150 (MQ=255)

        tCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCgctgct                                                                                                                                          >  2:2251307/1‑150 (MQ=255)

               tCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTAAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGcc                                                                                                                                   <  1:258635/150‑1 (MQ=255)

                cTGNCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCGTTGAATGGACGTGGTTAAGGANGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATNGGT‑GCCTTGGCACCGCTGCTCGGCGCCt                                                                                                                                  <  1:1843111/150‑1 (MQ=255)

                 tGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTg                                                                                                                                 >  1:394936/1‑150 (MQ=255)

                 tGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCAAGGCAcc                                                                                                                                                <  1:1709042/135‑1 (MQ=255)

                 tGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCAAGGCAcc                                                                                                                                                >  2:1709042/1‑135 (MQ=255)

                  gCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGc                                                                                                                                >  1:135256/1‑150 (MQ=255)

                    cATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGcac                                                                                                                              >  1:431183/1‑150 (MQ=255)

                     aTCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGcaca                                                                                                                             >  2:1919483/1‑150 (MQ=255)

                      tCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCCCCGGCGCGAACTAATCGGCTGGATGCGTATCGGT‑GCCGTGGCACCGCTGCTCGGCGCCTGCACAg                                                                                                                            <  2:1466972/150‑1 (MQ=255)

                            tGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTcc                                                                                                                      >  2:1314913/1‑150 (MQ=255)

                               aaTGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCtt                                                                                                                        >  1:1278965/1‑145 (MQ=255)

                               aaTGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGC‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCtt                                                                                                                        <  2:1278965/145‑1 (MQ=255)

                                 tGCCAACGCCGCAACCTCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACCGGCGCGAAGTGAGCCGCTGGATGGGTACCGTG‑GCCTTTGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAggg                                                                                                                 <  1:958330/150‑1 (MQ=255)

                                 tGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAggg                                                                                                                 >  1:365014/1‑150 (MQ=255)

                                    cAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAggtgag                                                                                                              >  1:585953/1‑146 (MQ=255)

                                     aaCGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGgcagc                                                                                                             >  2:1032124/1‑150 (MQ=255)

                                     aaCGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGgcagc                                                                                                             >  2:729189/1‑150 (MQ=255)

                                          cgcAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGATGAGATCGGCTGGATGGGAATAGATCGCCGT‑TCGTATTTTCTTTGCGCCTTCACAGCCTTCCCAGGGCAGCAGggc                                                                                                        >  1:2378256/1‑150 (MQ=255)

                                             aaCATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGgc                                                                                                                                      >  2:1408748/1‑117 (MQ=255)

                                             aaCATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGgc                                                                                                                                      <  1:1408748/117‑1 (MQ=255)

                                                aTCGGGGTCCCTCGTTGTACTTGGTGAATGATGTCGGATTCGATGGCGAGCAGTGTGCACAGGCGCGCAGTGATCGGCTGGATGGGGATCGGT‑GCCTTGGCACCGCTGCTCGCCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAAt                                                                                                  <  2:1096852/150‑1 (MQ=255)

                                                  ccGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATg                                                                                                 <  2:1168215/149‑1 (MQ=255)

                                                  ccGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATg                                                                                                 <  2:1167824/149‑1 (MQ=255)

                                                  ccGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATg                                                                                                 >  1:1168215/1‑149 (MQ=255)

                                                  ccGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATg                                                                                                 >  1:1167824/1‑149 (MQ=255)

                                                        cccTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCt                                                                                          <  1:1314913/150‑1 (MQ=255)

                                                          cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGggcg                                                                                                       >  2:104173/1‑135 (MQ=255)

                                                          cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGggcg                                                                                                       <  1:104173/135‑1 (MQ=255)

                                                          cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCg                                                                                        >  1:2408306/1‑150 (MQ=255)

                                                          cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCg                                                                                        >  1:2358154/1‑150 (MQ=255)

                                                          cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCg                                                                                        >  2:1060351/1‑150 (MQ=255)

                                                          cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCg                                                                                        >  2:1886581/1‑150 (MQ=255)

                                                          cTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCAAAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCg                                                                                        >  1:1771686/1‑150 (MQ=255)

                                                           tGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGa                                                                                       <  1:1919483/150‑1 (MQ=255)

                                                            ggaTGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGTCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGTGCAGCAGGGCGGCAATGCCCAGCTCGAc                                                                                      <  2:1255956/148‑1 (MQ=255)

                                                            gAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGAc                                                                                      >  2:782724/1‑150 (MQ=255)

                                                             aaTGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCg                                                                                                                                        >  1:517806/1‑99 (MQ=255)

                                                             aaTGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCg                                                                                                                                        >  1:518644/1‑99 (MQ=255)

                                                             aaTGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCg                                                                                                                                        <  2:518644/99‑1 (MQ=255)

                                                             aaTGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCg                                                                                                                                        <  2:518632/99‑1 (MQ=255)

                                                             aaTGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCg                                                                                                                                        <  2:517806/99‑1 (MQ=255)

                                                               tGGACGTGGTTAAGGATGGCGGATGCGATCGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTg                                                                                   <  2:2408306/150‑1 (MQ=255)

                                                                ggACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGc                                                                                  <  2:1179807/150‑1 (MQ=255)

                                                                ggACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTACACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGc                                                                                  <  2:1485993/150‑1 (MQ=255)

                                                                 gACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCt                                                                                 <  1:451188/150‑1 (MQ=255)

                                                                  aCGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCAAAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTg                                                                                <  2:1771686/150‑1 (MQ=255)

                                                                   cGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGt                                                                               <  2:1611019/150‑1 (MQ=255)

                                                                             gATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAg                                                                                                                   >  1:1684907/1‑104 (MQ=255)

                                                                             gATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAg                                                                                                                   <  2:1684907/104‑1 (MQ=255)

                                                                             gATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGa                                                                     >  2:1614621/1‑150 (MQ=255)

                                                                                         gATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAg                                                                                            <  1:1151980/115‑1 (MQ=255)

                                                                                               gAGCAGTGTGCACAGGCGCGAAGTTATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGc                                                                                  >  2:1621775/1‑119 (MQ=255)

                                                                                               gAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGc                                                                                  <  1:1621775/119‑1 (MQ=255)

                                                                                               gAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCa                                                   <  1:729189/150‑1 (MQ=255)

                                                                                                    gtgtGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTg                                              <  1:475315/150‑1 (MQ=255)

                                                                                                    gtgtGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCACAGCTAGCGCTGATGCAGGTCGCCGATAGCCTCGATGCCCGCCAGCCTg                                              >  1:1738485/1‑150 (MQ=255)

                                                                                                          acaGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCa                                                   >  2:648936/1‑139 (MQ=255)

                                                                                                          acaGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCa                                                   <  1:648936/139‑1 (MQ=255)

                                                                                                           caGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGc                                       <  1:1060351/150‑1 (MQ=255)

                                                                                                                gcgAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGAc                                                                                      <  1:2801/98‑1 (MQ=255)

                                                                                                                gcgAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGAc                                                                                      >  2:2801/1‑98 (MQ=255)

                                                                                                                gcgAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACtt                                                                                    >  1:379323/1‑100 (MQ=255)

                                                                                                                gcgAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACtt                                                                                    <  2:379323/100‑1 (MQ=255)

                                                                                                                gcgAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGc                                            >  2:1617324/1‑140 (MQ=255)

                                                                                                                gcgAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGc                                            <  1:1617324/140‑1 (MQ=255)

                                                                                                                 cgAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCggtggt                                 >  2:2256720/1‑150 (MQ=255)

                                                                                                                     gTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCg                             <  1:782724/150‑1 (MQ=255)

                                                                                                                         tCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTa                         >  1:1690430/1‑150 (MQ=255)

                                                                                                                         tCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTa                         >  2:2218812/1‑150 (MQ=255)

                                                                                                                         tCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACACTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTa                         >  1:2089501/1‑150 (MQ=255)

                                                                                                                             cTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCg                     <  2:431183/150‑1 (MQ=255)

                                                                                                                                gATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGtt                  >  2:1675898/1‑150 (MQ=255)

                                                                                                                                   gggTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTggg               <  1:1304469/150‑1 (MQ=255)

                                                                                                                                     gTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGc             >  1:115487/1‑150 (MQ=255)

                                                                                                                                     gTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGc             >  2:2316861/1‑150 (MQ=255)

                                                                                                                                      cagcGGT‑GCCAAGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGcc            >  1:405760/4‑150 (MQ=255)

                                                                                                                                       aTCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCg           <  1:2326107/150‑1 (MQ=255)

                                                                                                                                         cGGT‑GCCAAGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCCTGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGt         >  1:1239663/1‑150 (MQ=255)

                                                                                                                                          ggT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTc        >  2:2268740/1‑150 (MQ=255)

                                                                                                                                           gT‑GGCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCa       >  2:1007621/1‑150 (MQ=255)

                                                                                                                                           gT‑GCGTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCa       <  2:879500/150‑1 (MQ=255)

                                                                                                                                           gT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCggt                                    >  1:694563/1‑121 (MQ=255)

                                                                                                                                           gT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCggt                                    <  2:694563/121‑1 (MQ=255)

                                                                                                                                           gT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCgg                                     <  1:765807/120‑1 (MQ=255)

                                                                                                                                           gT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCgg                                     >  2:765807/1‑120 (MQ=255)

                                                                                                                                           gT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCa       <  2:10049/150‑1 (MQ=255)

                                                                                                                                           gT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCa       <  1:2003508/150‑1 (MQ=255)

                                                                                                                                           gT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCa       >  2:1653227/1‑150 (MQ=255)

                                                                                                                                               ccTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGcc                                                                       <  1:1813818/83‑1 (MQ=255)

                                                                                                                                               ccTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGcc                                                                       >  2:1813818/1‑83 (MQ=255)

                                                                                                                                               ccTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGcc    >  1:1280032/1‑150 (MQ=255)

                                                                                                                                                 ttGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCCCGTATGGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCAc  >  1:1946056/1‑150 (MQ=255)

AATTGCTGTCGGATTTCTGCCATCAAACTGTAATGCCAACGCCGCAACATCCGGGTCCCTGAATGGACGTGGTTAAGGATGGCGGATGCGATGGCGAGCAGTGTGCACAGGCGCGAAGTGATCGGCTGGATGGGTATCGGT‑GCCTTGGCACCGCTGCTCGGCGCCTGCACAGCCTTCCCAGGGCAGCAGGGCGGCAATGCCCAGCTCGACTTGCTGTACGTCGCCGATACCCTCGATGCCCGCCAGCCTGGCCAGGCGGTGGTACCGGCTACCCGGTTGGGGCCGGTCAGCCAC  >  NC_002947/1193790‑1194083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`