Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,237,662 C→T 7.1% L151L (CTG→CTA) ‡ PP_1078 ← ABC transporter ATP‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,237,6620CT 7.1% 261.4 / 5.4 92L151L (CTG→CTA) ‡PP_1078ABC transporter ATP‑binding protein
Reads supporting (aligned to +/- strand):  ref base C (40/45);  new base T (2/5);  total (42/50)
Fisher's exact test for biased strand distribution p-value = 4.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGGCTTCTTCCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAATGTT  >  NC_002947/1237514‑1237811
                                                                                                                                                    |                                                                                                                                                      
aGGCTTCTTCCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCa                                                                                                                                                       <  1:1067445/150‑1 (MQ=255)
  gCTTCTTCCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGTTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAgc                                                                                                                                                     <  1:61107/150‑1 (MQ=255)
       ttcCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCg                                                                                                                                                <  1:978384/150‑1 (MQ=255)
        tcCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGcctgc                                                                                                                                               <  1:2301067/150‑4 (MQ=255)
          cTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCTGGCGCCCGAGc                                                                                                                                             <  2:1295036/150‑1 (MQ=255)
          cTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGc                                                                                                                                             <  1:1028529/150‑1 (MQ=255)
          cTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCCCGGGCGCTGGCGCCCGAGc                                                                                                                                             <  2:633672/150‑1 (MQ=255)
              tCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAgg                                                                                                                                         >  1:558320/1‑150 (MQ=255)
                    gTGACCAGAATGGCGCTGGTACCGCGAATTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGaca                                                                                                                                   >  1:1245960/1‑150 (MQ=255)
                     tGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCCCGGGCGCTGGCGCCCGAGcc                                                                                                                                            >  1:2084221/1‑140 (MQ=255)
                     tGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCCCGGGCGCTGGCGCCCGAGcc                                                                                                                                            <  2:2084221/140‑1 (MQ=255)
                       aCCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGt                                                                                                                                >  1:1417861/1‑150 (MQ=255)
                        ccAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAAGGGCTCGTCCAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGtt                                                                                                                               >  2:106387/1‑150 (MQ=255)
                              tGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTgctgct                                                                                                                         >  2:803533/1‑150 (MQ=255)
                               ggCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGctgctg                                                                                                                        <  1:287277/150‑1 (MQ=255)
                                gcgcTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTgg                                                                                                                       >  2:2398061/1‑150 (MQ=255)
                                      gTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGccgccg                                                                                                                 <  1:794372/150‑1 (MQ=255)
                                          cgcgGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCAACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGGGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACa                                                                                                             >  2:2161057/1‑150 (MQ=255)
                                            cgGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCTCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGc                                                                                                           <  1:253707/150‑1 (MQ=255)
                                            cgGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCg                                                                                                                                                >  2:200517/1‑113 (MQ=255)
                                            cgGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCg                                                                                                                                                <  1:200517/113‑1 (MQ=255)
                                            cgGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCTAGGGCGACACGTTGCTGCTGGCCGCCGGACAGc                                                                                                           >  1:1293515/1‑150 (MQ=255)
                                                   tGAGGATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGTAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTCCTGGCCGCCGGACAGCTCATGCg                                                                                                    <  2:1191648/150‑1 (MQ=255)
                                                    gagaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCt                                                                                                          <  2:1990813/143‑1 (MQ=255)
                                                    gagaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCt                                                                                                          >  1:1990813/1‑143 (MQ=255)
                                                    gagaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCgg                                                                                                   <  2:976323/150‑1 (MQ=255)
                                                    gagaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCgg                                                                                                   >  2:1245685/1‑150 (MQ=255)
                                                    gagaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCgg                                                                                                   <  1:803533/150‑1 (MQ=255)
                                                    gagaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCgg                                                                                                   >  2:2077692/1‑150 (MQ=255)
                                                    gagaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCgg                                                                                                   <  2:2197530/150‑1 (MQ=255)
                                                    gagaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCgg                                                                                                   <  1:1661861/150‑1 (MQ=255)
                                                     agaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGtt                                                                                                                               >  1:1581386/1‑121 (MQ=255)
                                                     agaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGtt                                                                                                                               <  2:1581386/121‑1 (MQ=255)
                                                     agaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCggg                                                                                                  >  2:1703090/1‑150 (MQ=255)
                                                     agaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCggg                                                                                                  <  2:1417861/150‑1 (MQ=255)
                                                        aTGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTTAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTaa                                                                                               <  1:1150273/150‑1 (MQ=255)
                                                           tCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCg                                                                                                                                                <  2:1674061/98‑1 (MQ=255)
                                                           tCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCg                                                                                                                                                >  1:1674061/1‑98 (MQ=255)
                                                             gcgAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAAcgccc                                                                                          >  1:1847166/1‑150 (MQ=255)
                                                                aaCCTCATGGCTCAGGCGCCGGCGCAGCTCCGCGTCGACGTTGGTGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTCAcgcccgcc                                                                                       <  2:235086/150‑1 (MQ=255)
                                                                aaCCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAAcgcccgcc                                                                                       <  1:1672156/150‑1 (MQ=255)
                                                                    tCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGc                                                                                   >  2:763037/1‑150 (MQ=255)
                                                                           tCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGa                                                                            >  1:2331215/1‑150 (MQ=255)
                                                                               gcgcCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGttt                                                                        <  1:49688/150‑1 (MQ=255)
                                                                                       gcAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCt                                                               >  2:1890469/1‑150 (MQ=255)
                                                                                          gCTCCCCGGCGGGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCa                                                            <  1:1285190/150‑1 (MQ=255)
                                                                                          gCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCa                                                            <  2:971614/150‑1 (MQ=255)
                                                                                            tCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCCCATGCGGGTAACGCCCGCCCAGCTCCCCGATTTTT‑ACCAGCTCCAGc                                                          >  2:723220/1‑150 (MQ=255)
                                                                                             ccACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCCCCAGCa                                                         >  1:741357/1‑150 (MQ=255)
                                                                                                 gTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCAtctc                                                     >  1:1103823/1‑150 (MQ=255)
                                                                                                    gAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGCGTTTG‑ACCAGCACCAGCATCTCTTc                                                  >  1:797197/1‑150 (MQ=255)
                                                                                                    gAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTc                                                  <  1:1172872/150‑1 (MQ=255)
                                                                                                        ttGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGACAACCCACAGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATg                                              >  1:2275122/1‑150 (MQ=255)
                                                                                                          ggAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGAc                                            >  2:1433612/1‑150 (MQ=255)
                                                                                                           gagaATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACg                                           >  2:1708623/1‑150 (MQ=255)
                                                                                                           gagaATGGCCCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACg                                           >  1:820284/1‑150 (MQ=255)
                                                                                                             gaATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCccgcc                                                                              >  1:1815635/1‑114 (MQ=255)
                                                                                                             gaATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCccgcc                                                                              <  2:1815635/114‑1 (MQ=255)
                                                                                                             gaATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGa                                                                            >  2:2065832/1‑116 (MQ=255)
                                                                                                             gaATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTACTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGa                                                                            <  1:2065832/116‑1 (MQ=255)
                                                                                                                  gCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAg                                                                           <  2:2020963/112‑1 (MQ=255)
                                                                                                                  gCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAg                                                                           >  1:2020963/1‑112 (MQ=255)
                                                                                                                  gCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCt                                    >  2:1582555/1‑150 (MQ=255)
                                                                                                                   cTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGccgccg                                                                                                                 >  2:426484/1‑73 (MQ=255)
                                                                                                                   cTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGccgccg                                                                                                                 <  1:426484/73‑1 (MQ=255)
                                                                                                                     cGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGc                                 <  1:1433612/150‑1 (MQ=255)
                                                                                                                       tCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGt                                                                          <  2:2316355/108‑1 (MQ=255)
                                                                                                                       tCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGt                                                                          >  1:2316355/1‑108 (MQ=255)
                                                                                                                         aaGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTgg                             <  2:1847166/150‑1 (MQ=255)
                                                                                                                           gcagcagcaGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGgt                           >  2:1018680/1‑150 (MQ=255)
                                                                                                                                agcggTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGATGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTg                      <  2:564579/150‑1 (MQ=255)
                                                                                                                                 gcagTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTgg                     <  1:1890469/150‑1 (MQ=255)
                                                                                                                                 gcagTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTgg                     <  2:230688/150‑1 (MQ=255)
                                                                                                                                 gcagTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTgg                     >  2:1360044/1‑150 (MQ=255)
                                                                                                                                  cagTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATTACGGCCGCCTGGCGTGGGTGTTTGGc                    <  1:1245685/150‑1 (MQ=255)
                                                                                                                                     ttGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAg                                                           >  1:2328580/1‑108 (MQ=255)
                                                                                                                                     ttGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAg                                                           <  2:2328580/108‑1 (MQ=255)
                                                                                                                                       gCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGa                                                <  1:116835/117‑1 (MQ=255)
                                                                                                                                       gCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGa                                                >  2:116835/1‑117 (MQ=255)
                                                                                                                                       gCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATAc               <  2:1828814/150‑1 (MQ=255)
                                                                                                                                       gCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATAc               <  2:1103823/150‑1 (MQ=255)
                                                                                                                                       gCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGCGGGTGTTTGGCGATAc               >  2:1637033/1‑150 (MQ=255)
                                                                                                                                         ggCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTACTGCCGGCAGACGGCAAACTAATGCCGGAATCGCGCGCGGTTTGAG‑TTATTATGTATCGGCGCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCa             >  2:866122/1‑150 (MQ=255)
                                                                                                                                          gCTCGGGCGCTGGCGCCCGAGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGt                               >  2:235117/1‑131 (MQ=255)
                                                                                                                                          gCTCGGGCGCTGGCGCCCGAGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGt                               <  1:235117/131‑1 (MQ=255)
                                                                                                                                          gCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCaa            <  1:1916653/150‑1 (MQ=255)
                                                                                                                                           cTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGCTaaaaaa           >  2:854616/1‑145 (MQ=255)
                                                                                                                                           cTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCaaa           <  1:2398061/150‑1 (MQ=255)
                                                                                                                                           cTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCaaa           <  1:1360044/150‑1 (MQ=255)
                                                                                                                                            tCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAg          <  1:1454629/150‑1 (MQ=255)
                                                                                                                                             cGGGCGCTGGCGCCCGAGCCGGGGCGACACGTTGCTGCTTGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAgg         <  1:123564/150‑1 (MQ=255)
                                                                                                                                                gcgcCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCaa      <  2:847415/150‑1 (MQ=255)
                                                                                                                                                    cAGCGCCCGAGACGGGGCGACACGTTGCTGCTGGCAGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑AACAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAATGtt  >  2:2334286/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
AGGCTTCTTCCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTG‑ACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAATGTT  >  NC_002947/1237514‑1237811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑