| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,266,695 | A→T | 7.1% | A433A (GCT→GCA) | quiP ← | acyl‑homoserine lactone acylase QuiP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,266,695 | 0 | A | T | 7.1% | 321.9 / 11.6 | 109 | A433A (GCT→GCA) | quiP | acyl‑homoserine lactone acylase QuiP |
| Reads supporting (aligned to +/- strand): ref base A (44/55); new base T (2/6); total (47/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
TGCAGCATCGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTCTGGCTGGGCCAGCA > NC_002947/1266546‑1266843 | tGCAGCATCGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGgca < 1:1470319/150‑1 (MQ=255)tGCAGCATCGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGgca < 1:1468885/150‑1 (MQ=255) agcaTCGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGgcagca > 1:1154996/1‑150 (MQ=255) gcaTCGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCGGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGcagcag > 1:924942/1‑150 (MQ=255) actgggTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGcc > 1:2001801/4‑150 (MQ=255) cGGGTCGGCATAGCCGCCCTGGGCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGt < 1:120549/150‑1 (MQ=255) ggTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑a < 2:1338816/150‑1 (MQ=255) gTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑Ac > 2:2214703/1‑150 (MQ=255) tCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCTGCTGCCGTC‑aac < 2:1973448/150‑3 (MQ=255) tCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACt > 1:692716/1‑150 (MQ=255) tCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAG‑TGACGGCTGCTGCCGTC‑aact < 2:1532071/150‑4 (MQ=255) tCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGAGTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCCCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACt > 1:857192/1‑150 (MQ=255) ggCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCTGCTGCCGTC‑aa > 2:1639798/1‑146 (MQ=255) ggCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCTGCTGCCGTC‑aa < 1:1639798/147‑2 (MQ=255) gCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCa > 1:1966147/1‑150 (MQ=255) gCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGACAAAAACGAAGTTGACGGCTGCTGCCGTC‑aacttc < 1:564861/150‑6 (MQ=255) cATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCAc > 1:1505509/1‑150 (MQ=255) cATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCAc < 1:1275168/150‑1 (MQ=255) tAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCACGGGGCTTTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACgt < 1:2090322/150‑1 (MQ=255) aGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACgtg > 1:443970/1‑150 (MQ=255) ccGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGtgtg > 2:1557607/1‑150 (MQ=255) cGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGc > 2:634073/1‑150 (MQ=255) cGTCCCAGTCGTAAAGCACGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGc > 2:1798230/1‑150 (MQ=255) gTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGNGCt < 2:1505509/150‑1 (MQ=255) tCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTg > 1:732329/1‑150 (MQ=255) cccAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGt > 1:301236/1‑150 (MQ=255) ccAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCGCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTCCtccc > 2:2343819/1‑147 (MQ=255) aGTCGTAACGCCCGTCCCAGCCCAGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGa > 1:1078242/1‑150 (MQ=255) gTCGTACCGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCGTTCGCGGTGATTGGGGTAGCGGACACTGGCCTGCCAGCCGATGTGCTCAGGCTCCGCAAAACCGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGaa < 2:1041977/150‑1 (MQ=255) gTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGaa < 1:1500440/150‑1 (MQ=255) tCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAg < 1:1100005/150‑1 (MQ=255) gCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGcc > 1:107065/1‑149 (MQ=255) gCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCt > 2:1885149/1‑150 (MQ=255) ccGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTcc < 2:2268161/150‑1 (MQ=255) gTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCAc < 2:557087/150‑1 (MQ=255) cAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTc > 1:473818/1‑150 (MQ=255) gCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCtt > 1:1303361/1‑150 (MQ=255) ccGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTgg < 2:454021/150‑1 (MQ=255) ggCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCGGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGcc < 2:924942/150‑1 (MQ=255) gAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCcgc < 1:1798230/150‑1 (MQ=255) agcagGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAgg < 1:961428/150‑1 (MQ=255) gcagGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGt > 1:2359151/1‑150 (MQ=255) cagGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCAGTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTc < 2:2333752/150‑1 (MQ=255) cccTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGTTGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGc < 2:1569073/134‑1 (MQ=255) cccTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGTTGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGc > 1:1569073/1‑134 (MQ=255) tGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAgg < 2:2131179/150‑1 (MQ=255) tGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAgg < 2:2131344/150‑1 (MQ=255) tGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAgg < 2:32410/150‑1 (MQ=255) ggCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAggg < 2:1078242/150‑1 (MQ=255) gCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGc > 1:1418440/1‑150 (MQ=255) ttCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATc > 1:1255113/1‑150 (MQ=255) gcggcgATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAg > 2:2042432/1‑150 (MQ=255) gcggcgATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAg < 1:2214703/150‑1 (MQ=255) cggcgATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAgg < 2:1671949/150‑1 (MQ=255) cgATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGCC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTg < 2:944855/150‑1 (MQ=255) ttGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGa < 2:732329/150‑1 (MQ=255) ggTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCAc < 1:209843/150‑1 (MQ=255) ggTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCAc > 2:1488797/1‑150 (MQ=255) gTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGtt < 2:217776/105‑1 (MQ=255) gTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGtt > 1:217776/1‑105 (MQ=255) gTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCAcc > 1:1458572/1‑150 (MQ=255) ccACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAAc > 2:2203748/1‑150 (MQ=255) cTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCGGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGaa > 2:774262/1‑146 (MQ=255) cTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCGGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGaa < 1:774262/146‑1 (MQ=255) cTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTgg < 1:1488797/150‑1 (MQ=255) cTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTgg < 2:2001801/150‑1 (MQ=255) cTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCACGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTgg < 2:301236/150‑1 (MQ=255) tgccgtGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGGCGAAGGCCCGCTCAACGTTCTTGGCCCGCGTCAGCTCGAACAGTGCATCCAGGCTGCGATCACCTTTGACCTggg < 2:142549/145‑1 (MQ=255) aCTTGCCAGCCGATGTGCTCAGGATCGGCACAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGc < 2:1591361/150‑1 (MQ=255) cTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCa < 2:473818/150‑1 (MQ=255) ttGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑AGTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTGTTGGCCATCGTGATTTGGAACAGGGGATGCAGGCTGAGATCATCTTTGAAATGGGGCAg > 1:1969885/1‑150 (MQ=255) ttGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAg > 2:1807112/1‑150 (MQ=255) ttGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAg < 1:1885149/150‑1 (MQ=255) ttGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAg > 2:1903642/1‑150 (MQ=255) ttGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAg < 2:1458572/150‑1 (MQ=255) ccAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGtt > 2:770509/1‑150 (MQ=255) ccAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGCGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGtt > 2:2219234/1‑150 (MQ=255) gCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGACGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCttt < 2:1329480/132‑1 (MQ=255) ccGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAgc < 2:240005/150‑1 (MQ=255) tgtgCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGcca < 1:1728668/150‑1 (MQ=255) gtgCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGccag < 1:55704/150‑1 (MQ=255) gtgCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGccag < 1:2203748/150‑1 (MQ=255) cTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGccaggcc > 1:2331332/1‑150 (MQ=255) tCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGTCTg < 1:1903642/150‑1 (MQ=255) tCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTg > 1:1911562/1‑150 (MQ=255) cGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTgg < 1:1575989/150‑1 (MQ=255) gCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCg > 2:1993949/1‑150 (MQ=255) aaCGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCCAGTTGGTACTAGGTGGGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTc > 2:1244001/1‑150 (MQ=255) aaCGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGCGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTc < 1:2219234/150‑1 (MQ=255) aCGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTgggg > 1:292866/1‑116 (MQ=255) cGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctg < 1:1747794/150‑1 (MQ=255) gAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctgg < 2:443970/150‑1 (MQ=255) gTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctggctg > 1:196431/1‑150 (MQ=255) ttGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctggctgg < 1:1557607/150‑1 (MQ=255) gtGACGGCTGCTGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGc < 1:891593/110‑1 (MQ=255) gtGACGGCTGCTGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGc > 2:891593/2‑111 (MQ=255) tGACGGCTGCTGCCGTCAACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTctggcgaa < 1:82532/150‑4 (MQ=255) gACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTc > 2:77360/1‑141 (MQ=255) gACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTc < 1:77360/141‑1 (MQ=255) cagcagCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTCTGGCTGGGCcagca < 2:1255113/150‑1 (MQ=255) | TGCAGCATCGGGTCGGCATAGCCGTCCCAGTCGTAACGCCCGTCCCAGCCCGGCGAGGGCAGCAGGCCCTGGCCTTCGCGGCGATTGGGGTAGCGGCCACTGACTTGCCAGCCGATGTGCTCAGGCTCGGCAAAAACGAAGTTGACGGCAGCAGCCGTC‑ACTTCACGTGTGCTGTCGAAGGCCCGCTCCACGTTCTTGGCCCGCGTCAGGTCGAACAGGGCATCCAGGCTGCGATCACCTTTGAACTGGGGCAGGTTCAGCGCCAGGCCCAGGCTGGCGTTTTCTGGCTGGGCCAGCA > NC_002947/1266546‑1266843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |