Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,307,447 C→G 8.5% A59A (GCG→GCC livK ← branched‑chain amino acids ABC transporter substrate‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,307,4470CG 8.5% 327.6 / 18.6 106A59A (GCG→GCClivKbranched‑chain amino acids ABC transporter substrate‑binding protein
Reads supporting (aligned to +/- strand):  ref base C (51/46);  new base G (7/2);  total (58/48)
Fisher's exact test for biased strand distribution p-value = 1.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.32e-01

Only 100 of 113 total aligned reads displayed.

GACGCTGGCTGGGTGGAGCTGGAGCACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCGGCCAGTACCATTGC  >  NC_002947/1307298‑1307596
                                                                                                                                                     |                                                                                                                                                     
gACGCTGGCTGGGTGGAGCTGGAGCACAGGTGGCCGACCACGACCTTGACGCCGTGGTTGACAACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTACTTGGCTTCGATCATCTTGCCATCCACGccgccc                                                                                                                                                       >  1:953668/1‑150 (MQ=255)
 aCGCTGGCTGGGTGGAGCTGGAGCACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGccgcccg                                                                                                                                                      >  2:464290/1‑150 (MQ=255)
   gctggctgGGTGGAGCTGGAGCACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCcgcg                                                                                                                                                    >  2:1160497/1‑150 (MQ=255)
    ctggctggGTGGAGCGGGAGCACAGGTGGCCGACCACGAACCTAGCGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCgcgg                                                                                                                                                   <  1:854754/150‑1 (MQ=255)
     tggctggGTGGAGCTGGAGCACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCgcggc                                                                                                                                                  >  1:246353/1‑150 (MQ=255)
       gctggGTGGAGCTGGAGCACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTCGCCATCCACGCCGCCCGCGGCGt                                                                                                                                                <  2:852160/150‑1 (MQ=255)
       gctggGTGGAGCTGGAGCACAGGTGGCCAACCATGCACTTTCCCCTTTCACGTATCTCTGGGTTGGGGCCTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGt                                                                                                                                                >  1:1003597/1‑150 (MQ=255)
        ctggGTGGAGCTGGAGCACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGtt                                                                                                                                               <  2:1786827/150‑1 (MQ=255)
         tggGTGGAGCTGGAGCACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTg                                                                                                                                              >  1:1574811/1‑150 (MQ=255)
         tggGTGGAGCTGGAGCACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTg                                                                                                                                              >  2:1968506/1‑150 (MQ=255)
               gagctggagcACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATcc                                                                                                                                        <  1:1266226/150‑1 (MQ=255)
                   tggagcACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGa                                                                                                                                    <  1:1160497/150‑1 (MQ=255)
                     gagcACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATg                                                                                                                                  <  1:464290/150‑1 (MQ=255)
                     gagcACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATg                                                                                                                                  <  1:619585/150‑1 (MQ=255)
                       gcACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGgc                                                                                                                                >  2:1082167/1‑150 (MQ=255)
                       gcACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGgc                                                                                                                                <  1:1360922/150‑1 (MQ=255)
                        cacaGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGAGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGgct                                                                                                                               >  1:41739/1‑150 (MQ=255)
                         acaGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGgctt                                                                                                                              >  1:1354064/1‑150 (MQ=255)
                             gTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGgcttgctt                                                                                                                          >  2:1593985/1‑150 (MQ=255)
                             gTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTAGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGgcttgctt                                                                                                                          >  2:1593947/1‑150 (MQ=255)
                               ggCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTgg                                                                                                                        <  1:1396128/150‑1 (MQ=255)
                                  cGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGat                                                                                                                                            <  1:2325645/127‑1 (MQ=255)
                                  cGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGat                                                                                                                                            >  2:2325645/1‑127 (MQ=255)
                                  cGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGgcgc                                                                                                                     >  2:823854/1‑150 (MQ=255)
                                    aCCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCg                                                                                                                   >  2:1733860/1‑150 (MQ=255)
                                      cACNAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGAt                                                                                                                 >  2:1500859/1‑150 (MQ=255)
                                      cACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCTCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGAt                                                                                                                 <  1:1593947/150‑1 (MQ=255)
                                      cACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGAt                                                                                                                 >  2:1124465/1‑150 (MQ=255)
                                      cACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGAt                                                                                                                 >  1:1134418/1‑150 (MQ=255)
                                      cACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGAt                                                                                                                 >  2:1674447/1‑150 (MQ=255)
                                      cACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGAt                                                                                                                 <  1:1593985/150‑1 (MQ=255)
                                         gAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGaa                                                                                                              <  1:1501581/150‑1 (MQ=255)
                                             ttGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCAACGCCGCGGGCGGCGtgga                                                                                                                                             >  1:1658761/1‑112 (MQ=255)
                                                    cgtcgtTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGgc                                                                                                                                >  2:1632122/1‑121 (MQ=255)
                                                    cgtcgtTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGc                                                                                                   >  1:1591049/1‑150 (MQ=255)
                                                           gACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTg                                                                                            >  1:179272/1‑150 (MQ=255)
                                                              cACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGNGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAAc                                                                                                             <  1:2157017/130‑1 (MQ=255)
                                                              cACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAAc                                                                                                             >  2:2157017/1‑130 (MQ=255)
                                                              cACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGt                                                                                         >  1:128937/1‑150 (MQ=255)
                                                              cACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGt                                                                                         >  1:549361/1‑150 (MQ=255)
                                                                     ttgGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGa                                                                                  <  1:1500859/150‑1 (MQ=255)
                                                                       ggCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGAcc                                                                                <  2:457373/150‑1 (MQ=255)
                                                                       ggCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGAcc                                                                                <  1:1034904/150‑1 (MQ=255)
                                                                             tGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCtt                                                                          <  1:823854/150‑1 (MQ=255)
                                                                             tGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCtt                                                                          >  1:838650/1‑150 (MQ=255)
                                                                             tGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCtt                                                                          <  2:2140498/150‑1 (MQ=255)
                                                                             tGCCACGGCCTGTTTAGGGTAGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCtt                                                                          <  2:1003597/150‑1 (MQ=255)
                                                                              gCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCCTGTCGCCGTACTGGGTCACGGGACCCGTCTTg                                                                         <  1:1402102/150‑1 (MQ=255)
                                                                               ccACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTgg                                                                        >  1:1580300/1‑150 (MQ=255)
                                                                                cACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGACGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTggg                                                                       >  1:1056867/1‑150 (MQ=255)
                                                                                 aCGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGa                                                                      >  1:1940624/1‑150 (MQ=255)
                                                                                        gTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGGTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGa                                                               <  2:863903/150‑1 (MQ=255)
                                                                                         tttAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGata                                                                                                                                           >  2:80736/1‑73 (MQ=255)
                                                                                            aGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGcc                                                           >  2:78903/1‑150 (MQ=255)
                                                                                                 cGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGa                                                                                                                                    >  2:2009304/1‑72 (MQ=255)
                                                                                                 cGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGa                                                                                                                                    <  1:2009304/72‑1 (MQ=255)
                                                                                                    aGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGa                                                   <  2:1591049/150‑1 (MQ=255)
                                                                                                    aGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGa                                                   <  1:2082293/150‑1 (MQ=255)
                                                                                                        gtcgtcgtATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTAc                                                                                              >  2:847350/1‑103 (MQ=255)
                                                                                                        gtcgtcgtATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTAc                                                                                              <  1:847350/103‑1 (MQ=255)
                                                                                                        gtcgtcgtATTCCTTGGATTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGt                                               >  2:937336/1‑150 (MQ=255)
                                                                                                           gtcgtATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGat                                                                                                                                            >  1:2008258/1‑54 (MQ=255)
                                                                                                           gtcgtATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGat                                                                                                                                            <  2:2008258/54‑1 (MQ=255)
                                                                                                           gtcgtATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATc                                            >  1:1501180/1‑150 (MQ=255)
                                                                                                              gtATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATcggc                                         >  2:1709726/1‑150 (MQ=255)
                                                                                                               tATCCCGTGGCTTCGAGCATCTTGCCATCCACGTCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATcggcg                                        <  2:953668/150‑1 (MQ=255)
                                                                                                                 ttCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTgg                                                                        >  2:463868/1‑116 (MQ=255)
                                                                                                                 ttCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTgg                                                                        <  1:463868/116‑1 (MQ=255)
                                                                                                                 ttCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCggcggc                                      >  1:2141265/1‑150 (MQ=255)
                                                                                                                     ttGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGgc                                                                                                                       <  2:1074608/65‑1 (MQ=255)
                                                                                                                     ttGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGgc                                                                                                                       >  1:1074608/1‑65 (MQ=255)
                                                                                                                     ttGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAAc                                  >  1:1139571/1‑150 (MQ=255)
                                                                                                                     ttGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGACGATGAACTGCATGTCGCCGTACTGGGGCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAAc                                  >  2:864846/1‑150 (MQ=255)
                                                                                                                        gCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCAt                                                                                                        >  2:93901/1‑77 (MQ=255)
                                                                                                                        gCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCAt                                                                                                        <  1:93901/77‑1 (MQ=255)
                                                                                                                        gCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGaa                               <  1:1082167/150‑1 (MQ=255)
                                                                                                                           tCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAAtgg                            <  2:1940624/150‑1 (MQ=255)
                                                                                                                             gAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAAtggct                          <  1:1674447/150‑1 (MQ=255)
                                                                                                                               gCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAAtggctgg                        <  2:179272/150‑1 (MQ=255)
                                                                                                                                cATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAAtggctggc                       >  2:2096584/1‑150 (MQ=255)
                                                                                                                                    ttGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTg                                                                         <  2:1246251/96‑1 (MQ=255)
                                                                                                                                    ttGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTAcc                   >  2:575828/1‑150 (MQ=255)
                                                                                                                                     ggataTCAACGCCGCGGGCGGCGTGGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTAccc                  >  1:1689678/5‑150 (MQ=255)
                                                                                                                                      gCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTgg                                                                        >  2:1446949/1‑95 (MQ=255)
                                                                                                                                      gCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGAt                                                              <  1:979322/105‑1 (MQ=255)
                                                                                                                                        taTCAACGCCGCGGGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCgg               >  1:1367958/2‑150 (MQ=255)
                                                                                                                                        cATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGc                                                            >  1:1656261/1‑105 (MQ=255)
                                                                                                                                        cATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGc                                                            <  2:1656261/105‑1 (MQ=255)
                                                                                                                                        cATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGCACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCgg               >  2:1551835/1‑150 (MQ=255)
                                                                                                                                         aTCCACGCCGCCCGCGGCGTTGATATCCTTGAGGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCGGc              >  1:436888/1‑150 (MQ=255)
                                                                                                                                          tcaaCGCCGCGGGCGGCGTGGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGAcc                                                                                >  2:2007814/4‑83 (MQ=38)
                                                                                                                                           caaCGCCGCGGGCGGCGTGGATATCCTTGATGGCTTGCTTGGCGCCGATGACCTGCTTCTCGCCGTACTTGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCGGCCa            >  1:2124700/3‑150 (MQ=255)
                                                                                                                                            aaCGCCGCGGGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGATGGCTACCCCGGCCAg           >  2:1219643/2‑150 (MQ=255)
                                                                                                                                            aaCGCCGCGGGCGGCGTGGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTACATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCGGCCAg           >  1:707454/2‑150 (MQ=255)
                                                                                                                                               gccgccCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCGGCCAGTAc        <  2:2141265/150‑1 (MQ=255)
                                                                                                                                               gccgccCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCGGCCAGTAc        <  2:1354064/150‑1 (MQ=255)
                                                                                                                                                ccgcccgcGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCGGCCAGTAcc       <  1:1709726/150‑1 (MQ=255)
                                                                                                                                                    ccgcGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGAt                                                  >  2:474096/1‑103 (MQ=255)
                                                                                                                                                    ccgcGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGAt                                                  <  1:474096/103‑1 (MQ=255)
                                                                                                                                                     cgcgGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCGGCCAGTACCATTgc  <  1:1435547/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GACGCTGGCTGGGTGGAGCTGGAGCACAGGTGGCCGACCACGAACTTGACGCCGTCGTTGACCACTTTGTTGGCGACTGCCACGGCCTGTTTAGGGTCGCAGGCGTCGTCGTATTCCTTGGCTTCGAGCATCTTGCCATCCACGCCGCCCGCGGCGTTGATATCCTTGATGGCTTGCTTGGCGCCGATGAACTGCATGTCGCCGTACTGGGTCACGGGACCCGTCTTGGGACCGGCGATGCCGATCTTGATGGTATCGGCGGCAAACGAATGGCTGGCTACCCCGGCCAGTACCATTGC  >  NC_002947/1307298‑1307596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: