| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 181,943 | C→T | 26.2% | noncoding (52/120 nt) | PP_5SB → | 5S ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 181,943 | 0 | C | T | 26.2% | 186.1 / 80.8 | 126 | noncoding (52/120 nt) | PP_5SB | 5S ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base C (45/48); new base T (8/25); total (53/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.32e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
CAAAACCCCTATCTGCACATGCAGGTAGGGGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAG > NC_002947/181794‑182088 | cAAAACCCCTATCTGCACATGCAGGTAGGGGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCACGCACGCCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTcagc < 2:1032361/150‑1 (MQ=255) aaaaCCCCTATCTGCACATGCAGGTAGGGGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTcagca > 2:2292662/1‑150 (MQ=255) cccTATCTGCACATGCAGGTAGGGGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTcagca < 2:213308/145‑1 (MQ=255) cccTATCTGCACATGCAGGTAGGGGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTcagca > 1:213308/1‑145 (MQ=255) aTGCAGGTAGGGGTTTTGTCTTTAAGTAGGAACTATAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGc > 1:1774042/1‑150 (MQ=255) cAGGTAGGGGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATGTCTTGACGACCATAGTGCATTGGAACCACCTGACCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGa < 2:1977400/150‑1 (MQ=255) gTAGGGGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATgg > 2:232068/1‑150 (MQ=255) ttGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTggg < 1:232068/150‑1 (MQ=255) ttGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTggg < 1:1294763/150‑1 (MQ=255) tCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTggg < 2:2055674/147‑1 (MQ=255) tAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTccc < 1:395850/150‑1 (MQ=255) ggAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCAtgtg > 2:1763175/1‑150 (MQ=255) gAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAACGTCTGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTga > 1:1946287/1‑150 (MQ=21) gAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTga < 1:1715504/150‑1 (MQ=255) aCAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTa > 1:1096024/1‑150 (MQ=255) cAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAg > 1:1978167/1‑150 (MQ=255) cAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAg < 2:2361751/150‑1 (MQ=255) ttCGCAGGCACGTCCTAGGGCCGGGCCAGCTCTCCGTATTTCTTGACGACCCTAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATc < 2:1946287/150‑1 (MQ=17) ttCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGt > 2:361583/1‑146 (MQ=255) tCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGACGGTAGTGTGGGGTTTCCCCATGTGAGACTAGTTCATCg > 1:703834/1‑150 (MQ=255) gCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTc > 1:1374839/1‑150 (MQ=255) cAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCa < 1:615245/150‑1 (MQ=255) aGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCaa > 1:2356241/1‑150 (MQ=255) aGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCaa > 1:140687/1‑139 (MQ=255) aGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCaa < 2:140687/139‑1 (MQ=255) cAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTcagca < 2:1504450/66‑1 (MQ=255) cAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTcagca > 1:1504450/1‑66 (MQ=255) caacaGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTga < 1:1149101/106‑1 (MQ=11) acacaGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTg > 1:1957614/1‑150 (MQ=255) aacaGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGc > 2:432885/2‑150 (MQ=255) gAATTTCTTGACGACCATAGTGCATTGGAACCACCTGCTCGCAGCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑g < 1:21880/150‑1 (MQ=255) aTTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCa < 1:432885/150‑1 (MQ=255) cTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACa > 2:2116619/1‑150 (MQ=255) ttGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcgtgcgcagat < 2:2451923‑M1/150‑32 (MQ=255) ttGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagat < 2:1076331‑M1/150‑32 (MQ=255) ttGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAg > 1:2045359/1‑150 (MQ=255) ttGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAg < 2:529601/150‑1 (MQ=255) gacgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagatag < 1:1267372‑M1/150‑34 (MQ=255) gacgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcacaaaaccctacctgcgtgcgcagatagg < 2:1238363‑M1/150‑34 (MQ=255) gacgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAggg > 2:649652/1‑150 (MQ=255) gacgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGGTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAggg < 2:1374839/150‑1 (MQ=255) gacgacCATAGAGCATTGGAACCAACTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGCGTAGATCATCATCAAGATTCGtttcgcaaagccgctacctgcatgtgcagatag < 2:1076302‑M1/150‑34 (MQ=255) acgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagatagg < 2:1738139‑M1/150‑35 (MQ=255) acgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcacaaaacccctacctgcatgtgcagatagg < 2:167515‑M1/150‑35 (MQ=255) acgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTAAGTAGTAAAACGATGCCTCGCCGATGGTAATATCGCTTGTCCCCATGTGATAGTAGTTCATCGTCAAGATTCAtttctcaaaacccctacctgcatgcgcagatagg < 2:1464343‑M1/150‑35 (MQ=255) acgacCATAGAGCATTGGAACCACCTCATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcgtgcgcagatagg < 2:1565184‑M1/150‑35 (MQ=255) cgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagataggg < 1:2245021‑M1/150‑36 (MQ=255) cgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagataggg < 1:26723‑M1/150‑36 (MQ=255) cgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaaccccgacctgcatgcgcagataggg < 1:1890854‑M1/150‑36 (MQ=255) gacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcgtgcgcagatagggg > 1:2115544‑M1/1‑114 (MQ=255) gacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagatagggg < 1:1016099‑M1/150‑37 (MQ=255) gacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGa > 2:1231800/1‑136 (MQ=255) gacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCt < 2:1825758/150‑1 (MQ=255) cATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcgtgcgcagatagg > 1:269893‑M1/1‑111 (MQ=255) cATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcgtgcgcagatagg < 2:269893‑M1/145‑35 (MQ=255) cATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCATC‑GCAGACAggg < 1:748301/144‑1 (MQ=255) cATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCATC‑GCAGACAggg > 2:748301/1‑144 (MQ=255) aTAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAGGGGCTTTgg < 1:2219569/150‑2 (MQ=255) tAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTc > 2:1336184/1‑150 (MQ=255) gagCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACACAAAGCCCCTGTCTGC‑ATCGCAGACAGGGGCTTTgggtt < 1:104165/150‑5 (MQ=17) gagCATTGGAACCACCTGATCCCATCCCGAACTAAGCAGTGAAATGATGATTCGCCGATGGTAGTGTGGGTTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCtt > 1:1003227/1‑150 (MQ=18) aTTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagatagg > 2:916902‑M1/1‑103 (MQ=255) aTTGGAACCACCTGATCCCATCCCGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagatagg < 1:916902‑M1/137‑35 (MQ=255) aTTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGACATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAg > 1:1334810/1‑134 (MQ=255) ttGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAgg > 2:1643757/1‑134 (MQ=255) ttGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAgg < 1:1643757/134‑1 (MQ=255) tGGAACCGCCTCCTCCCAGACCGAAATCAGCAGCTAAACGATGCATCGACGAGGGTAGCGTCCGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCgg < 2:695547/150‑1 (MQ=21) ggAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAg > 1:94807/1‑131 (MQ=255) gAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGcc < 1:1732705/110‑1 (MQ=255) gAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGcc > 2:1732705/1‑110 (MQ=255) gAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGt > 2:1161650/1‑150 (MQ=255) gAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGt < 2:2045359/150‑1 (MQ=255) gAACCACCTGATCCCATACCGAACTCAGCAGTGAAACGATGCAt > 1:758152/1‑44 (MQ=255) aaCCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGtt < 2:1978167/150‑1 (MQ=255) caccTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGc > 2:277657/1‑105 (MQ=255) caccTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGc < 1:277657/105‑1 (MQ=255) accTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCAt < 1:618720/67‑1 (MQ=37) ccTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTg > 1:1687567/1‑112 (MQ=255) ccTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTg < 2:1687567/112‑1 (MQ=255) cTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAgg > 1:34727/1‑124 (MQ=255) ccatgccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATc < 2:1319160/146‑1 (MQ=255) ccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTGGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTATGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGtt > 1:2357605/1‑150 (MQ=255) ccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATc > 1:1319160/1‑146 (MQ=255) ccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGtt < 2:1003227/150‑1 (MQ=255) ccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGtt > 2:1826487/1‑150 (MQ=255) atcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAg > 1:2027293/1‑150 (MQ=255) tcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagataggg > 2:2213094‑M1/1‑83 (MQ=255) tcccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagataggg < 1:2213094‑M1/118‑36 (MQ=255) cccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGaa < 1:1161650/150‑1 (MQ=255) ccGAACTCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTATGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcgtgcgcagataggg < 2:896231‑M1/116‑36 (MQ=255) ccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCa < 2:1320962/107‑1 (MQ=255) ccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCtt > 2:341857/1‑118 (MQ=255) ccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAAc > 2:207089/1‑150 (MQ=255) aaCTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGa < 1:2049249/150‑1 (MQ=255) aCTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGAt < 1:1445137/150‑1 (MQ=255) tCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagataggggtttt > 2:359363‑M1/1‑75 (MQ=255) tCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagataggggtttt < 1:359363‑M1/115‑41 (MQ=255) tCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagataggg > 1:490909‑M1/1‑75 (MQ=255) tCAGTAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAtttcgcaaaacccctacctgcatgcgcagataggg < 2:490909‑M1/110‑36 (MQ=255) gcagTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTgaga < 1:458168/51‑1 (MQ=33) | CAAAACCCCTATCTGCACATGCAGGTAGGGGTTTTGTCTTTAAGTAGGAACTACAGAGATTCGCAGGCACGTCCTAGGGACGGGCCAGCACACAGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTTTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAG > NC_002947/181794‑182088 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |