| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,687,564 | G→C | 5.3% | I27M (ATC→ATG) | ydcV ← | polyamine ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,687,564 | 0 | G | C | 5.3% | 301.7 / 6.2 | 95 | I27M (ATC→ATG) | ydcV | polyamine ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (40/50); new base C (2/3); total (42/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.90e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
AAGGTGGCCAGGCAAGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGTATACCGCGATCAGCACGATTGGCACCAA > NC_002947/1687415‑1687705 | aaGGTGGCCAGGCAAGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGCGCGCAAAGATAACCGCCGCGA‑CGTCGCCGTGGAAGGCGTACAGGAAgatg > 2:2092417/1‑150 (MQ=255) ggTGGCCAGGCAAGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGACCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAgatgat > 1:77422/1‑150 (MQ=255) gTGGCCAGGCAAGCCACCTGCAGCGACAGCTTGATTGCAGCTAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAGCGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATc < 1:22218/150‑1 (MQ=255) tGGCCAGGCAAGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGACCGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCa < 1:1495347/150‑1 (MQ=255) tGGCCAGGCAAGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGAAAACGTTGATGTACTTCAGGGCAAAGCCATGTGGCGGAGAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCa < 1:2123529/150‑1 (MQ=255) ggCCAGGCAAGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAg < 2:2424725/150‑1 (MQ=255) cAGGCAAGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGAt > 2:517049/1‑150 (MQ=255) aGGCAAGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATc < 1:1567843/150‑1 (MQ=255) aGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGaa < 1:2314382/150‑1 (MQ=255) aGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGaa < 2:1950353/150‑1 (MQ=255) ccACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGt < 2:1856559/150‑1 (MQ=255) cACCTGCAGCGACAGCTTGATTGAACAAAAATCATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGCAGGCGTACAGGAAGATGATCAGGATCGGGAAGTg > 1:62392/1‑150 (MQ=255) ccTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCa < 1:115590/150‑1 (MQ=255) cTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAg > 2:1398079/1‑150 (MQ=255) gCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCa < 2:1820633/132‑1 (MQ=255) gCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCa > 1:1820633/1‑132 (MQ=255) cAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGaa < 1:1161589/150‑1 (MQ=255) aGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAAc < 1:1060915/150‑1 (MQ=255) aGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAAc < 1:2347532/150‑1 (MQ=255) gACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGc < 2:1113994/150‑1 (MQ=255) cTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAgatgat < 1:1437183/120‑1 (MQ=255) cTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAgatgat > 2:1437183/1‑120 (MQ=255) cTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAg < 2:933944/144‑1 (MQ=255) cTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAg > 1:933944/1‑144 (MQ=255) cTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAAccc > 2:1626776/1‑150 (MQ=255) cTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGACACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAAccc > 2:1276914/1‑150 (MQ=255) ttGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAgatgat < 2:2344537/119‑1 (MQ=255) ttGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAgatgat > 1:2344537/1‑119 (MQ=255) ttGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCa < 1:562215/136‑1 (MQ=255) ttGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCa > 2:562215/1‑136 (MQ=255) aTTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGccc > 2:649983/1‑150 (MQ=255) gCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAg < 1:1753491/150‑1 (MQ=255) gCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCAACGTACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAg < 1:124283/150‑1 (MQ=255) gCCCCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGAAAGTGCAGGAACAGCAACCCGCCCCAg < 1:918113/150‑1 (MQ=255) cTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCATgc > 1:1165798/1‑150 (MQ=255) cTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGgc < 1:935746/150‑1 (MQ=255) tCGAGCACATCGCGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGC‑CTTCGGTGTTGAAGGCGTACCGGCAGATGCTCAGGATCGGGAAGTGCAGGAACAGCATCCCGCCCCAGgcc < 2:1330968/150‑1 (MQ=255) aGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGgccgcc > 2:168113/1‑150 (MQ=255) cacaTCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAg < 2:549913/150‑1 (MQ=255) acaTCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAgg > 1:2415492/1‑150 (MQ=255) aTCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGaa < 1:1424135/123‑1 (MQ=255) aTCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGaa > 2:1424135/1‑123 (MQ=255) aTCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGgcg > 1:1197487/1‑150 (MQ=255) cGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCa < 1:517049/150‑1 (MQ=255) gCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGcc > 1:1162708/1‑150 (MQ=255) cGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCt < 2:429049/150‑1 (MQ=255) gTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAAATGGCTGACGCTT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCa > 2:2433758/1‑150 (MQ=255) gTGAAGGCCACGTCGACCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCa < 2:77422/150‑1 (MQ=255) aaGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGAc < 1:1398079/150‑1 (MQ=255) gTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTc > 2:1044527/1‑150 (MQ=255) gTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTc > 2:1044487/1‑150 (MQ=255) gATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCaga > 2:2012632/1‑150 (MQ=255) gATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCaga < 1:1626776/150‑1 (MQ=255) tCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGGACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGt > 1:964717/1‑150 (MQ=255) cACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTCAACGCCGCGAAATATAGTAAT‑ATTTTGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGc < 2:62392/150‑1 (MQ=255) aCTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCa > 2:907354/1‑150 (MQ=255) aCTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCa > 1:1042280/1‑150 (MQ=255) aCTTCAGGGTAAAGCCCTTGGGCGAACAGGGTAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCa > 1:1880616/1‑150 (MQ=255) ttCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATc > 2:1000747/1‑150 (MQ=255) ttCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGCGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGGGCATc > 2:1000749/1‑150 (MQ=255) gggTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGaaa < 1:720379/150‑1 (MQ=255) gggTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGaaa < 1:749225/150‑1 (MQ=255) gTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGaaa < 1:2165229/148‑1 (MQ=255) gTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGaaa > 2:2165229/1‑148 (MQ=255) tAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGcc < 1:221971/150‑1 (MQ=255) tAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGCCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGcc < 1:1966426/150‑1 (MQ=255) aGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAg > 1:282320/1‑79 (MQ=255) aGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAg < 2:282320/79‑1 (MQ=255) cTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGgc < 2:1042280/150‑1 (MQ=255) ggCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGCAGCACAGCAGGAGCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCtt < 2:1880616/150‑1 (MQ=255) ggCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCtt < 2:1197487/150‑1 (MQ=255) ggAAAGCTGAACGCCGGGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAACCCCCAGGTGCTTGAc > 2:1224964/1‑150 (MQ=255) aaGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGAt < 1:1044527/150‑1 (MQ=255) aaGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGAt < 1:1044487/150‑1 (MQ=255) aGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATg > 1:352903/1‑150 (MQ=255) aGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATg < 2:695175/150‑1 (MQ=255) gCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACCGGACGATGATCAGGCTCGGGACGTGCAGGAACAGCAACCCGCCCCAGCCCGCCAGGCGCAGCCCTGCAGACGCTTTTCCAGAGCGCACCGCAAGCCCCCAGGCGCTTGCCGCTgc > 1:2001395/1‑149 (MQ=255) gCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATgg < 2:563688/150‑1 (MQ=255) tGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGcc < 1:2012632/150‑1 (MQ=255) tGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGcc > 1:2423917/1‑150 (MQ=255) gAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGccccc < 1:1921619/131‑1 (MQ=255) gAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGccccc > 2:1921619/1‑131 (MQ=255) aaCGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGt < 2:790086/115‑1 (MQ=255) aaCGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGt > 1:790086/1‑115 (MQ=255) aaCGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAg < 1:2092417/150‑1 (MQ=255) gccgcGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGta > 2:2324279/1‑150 (MQ=255) gccgcGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATCATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCa > 1:1042620/1‑115 (MQ=255) gccgcGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATCATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCa > 1:1042794/1‑115 (MQ=255) gccgcGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATCATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCa < 2:1042620/115‑1 (MQ=255) gccgcGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATCATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCa < 2:1042794/115‑1 (MQ=255) ccgcGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGtat > 2:1655630/1‑150 (MQ=255) cgT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGTATAcc < 1:869179/150‑1 (MQ=255) gT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGAGCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGTATACcg > 2:1345855/1‑150 (MQ=255) gT‑CTTCGGTGTTGAAGGCGGACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGTATACcg < 2:2001395/150‑1 (MQ=255) cTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGTATACcgcg > 1:2055492/1‑150 (MQ=255) cGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGTATACCGCGATc < 1:907354/150‑1 (MQ=255) tgtTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGTATACCGCGATCAGc < 1:1597973/150‑1 (MQ=255) gAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGTATACCGCGATCAGCACGa > 1:897620/1‑150 (MQ=255) ggaCAGGAAGATGATCAGGATCGCGAAGTGCCGGCACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGGAAGCGCCCAGGCGCTTGACGATGGCCAGGTATACCGCGATCCGCACGATTGGCa > 2:2403458/3‑150 (MQ=255) aGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGTATACCGCGATCAGCACGATTGGCACCaa > 1:285507/1‑150 (MQ=255) | AAGGTGGCCAGGCAAGCCACCTGCAGCGACAGCTTGATTGCCTCGAGCACATCGGGCCGGGTGAAGGCCACGTCGATCCACTTCAGGGTAAAGCCCTTGGGCGGAAAGCTGAACGCCGCGT‑CTTCGGTGTTGAAGGCGTACAGGAAGATGATCAGGATCGGGAAGTGCAGGAACAGCAACCCGCCCCAGGCCGCCAGGCGCAGCCCTGCAGACGCTTTTTCAGAGTGCATCGAAAGCCCCCAGGCGCTTGACGATGGCCAGGTATACCGCGATCAGCACGATTGGCACCAA > NC_002947/1687415‑1687705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |