Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,691,707 C→G 5.8% R205G (CGC→GGC)  PP_1487 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,691,7070CG 5.8% 395.3 / 11.5 122R205G (CGC→GGC) PP_1487hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (57/57);  new base G (4/3);  total (62/60)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 129 total aligned reads displayed.

TGCATGCCGAGCTGAACAAGCCGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGC  >  NC_002947/1691558‑1691849
                                                                                                                                                     |                                                                                                                                              
tGCATGCCGAGCTGAACAAGCCGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGccc                                                                                                                                                <  2:1284420/150‑1 (MQ=255)
          gCTGAACAAGCCGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCg                                                                                                                                      >  2:1837395/1‑150 (MQ=255)
            tGAACAAGCCGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGc                                                                                                                                    >  2:232168/1‑150 (MQ=255)
             gAACAAGCCGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGAACAAAGGCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCt                                                                                                                                   >  1:122962/1‑150 (MQ=255)
              aaCAAGCCGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCGGGCCAGCtcgtncag                                                                                                                                  <  2:1499183/150‑8 (MQ=255)
              aaCAAGCCGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTg                                                                                                                                  >  1:1778364/1‑150 (MQ=255)
                cAAGCCGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGa                                                                                                                                <  1:1549686/150‑1 (MQ=255)
                   gCCGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGAccc                                                                                                                             >  2:1825488/1‑150 (MQ=255)
                    ccGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGCAGCGTTTCAGGGGGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCg                                                                                                                            <  2:1165208/150‑1 (MQ=255)
                     cGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGc                                                                                                                                    <  2:1718068/141‑1 (MQ=255)
                     cGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGc                                                                                                                                    >  1:1718068/1‑141 (MQ=255)
                     cGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATATTCAGGTAACAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCgg                                                                                                                           >  1:413364/1‑150 (MQ=255)
                           aCCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCAGCCAGCTGCGGATGGACgcgcgcctac                                                                                                                     >  2:339051/1‑146 (MQ=255)
                            cccGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGccc                                                                                                                                                <  1:229826/122‑1 (MQ=255)
                            cccGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTg                                                                                                                                  <  2:1809328/136‑1 (MQ=255)
                            cccGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTgcg                                                                                                                    <  1:232168/150‑1 (MQ=255)
                                      gTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCGGGCCAGCtcgtcc                                                                                                                                    >  2:1908926/1‑119 (MQ=255)
                                      gTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCGGGCCAGCtcgtcc                                                                                                                                    <  1:1908926/124‑6 (MQ=255)
                                      gTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTg                                                                                                          <  1:1837395/150‑1 (MQ=255)
                                       tGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTgg                                                                                                         <  2:871086/150‑1 (MQ=255)
                                            cgcgCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGc                                                                                                    <  1:537912/150‑1 (MQ=255)
                                               gcTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAg                                                                                                 <  1:2201549/150‑1 (MQ=255)
                                                 tGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGt                                                                                               >  1:1541890/1‑150 (MQ=255)
                                                   tgcAAACGCCGTAGATGGCTGTCTAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTAGAAAGCCAGGTGc                                                                                             <  2:132807/149‑1 (MQ=255)
                                                       aaCGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGtt                                                                                         >  2:959650/1‑150 (MQ=255)
                                                        aCGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTg                                                                                        <  2:1541890/150‑1 (MQ=255)
                                                          gCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGcc                                                                                                                  >  1:1077127/1‑122 (MQ=255)
                                                              gagaTGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCa                                                                                  >  1:840616/1‑150 (MQ=255)
                                                                     cTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGt                                                                           >  1:1668377/1‑150 (MQ=255)
                                                                      tGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTg                                                                          >  2:1359539/1‑150 (MQ=255)
                                                                      tGCCGAGATGTACCCGGCCCGCGTGCTGATGGTCGTCAACGAAACCTTCATGGAGCGTGCCTACCTGGCCGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTg                                                                          <  2:122962/150‑1 (MQ=255)
                                                                        ccGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACt                                                                                                           >  1:1491951/1‑115 (MQ=255)
                                                                        ccGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACt                                                                                                           <  2:1491951/115‑1 (MQ=255)
                                                                        ccGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGc                                                                        >  1:1036301/1‑150 (MQ=255)
                                                                        ccGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCCGTTGGCTGCAGCGTAGTGGc                                                                        <  2:1036301/150‑1 (MQ=255)
                                                                           agaTGTACCTGGCCAGCGTGATGATGGTCGATCAGGTCTACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGt                                                                     <  1:1308677/150‑1 (MQ=255)
                                                                           agaTGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGt                                                                     <  1:996768/150‑1 (MQ=255)
                                                                             aTGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGc                                                                   <  1:240380/150‑1 (MQ=255)
                                                                                tACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTg                                                                >  1:2207827/1‑150 (MQ=255)
                                                                                   cTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCa                                                             <  1:552085/150‑1 (MQ=255)
                                                                                    tGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCAc                                                            >  2:2068819/1‑150 (MQ=255)
                                                                                        cAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGccc                                                                                                                                                <  1:2157561/62‑1 (MQ=255)
                                                                                        cAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGccc                                                                                                                                                >  2:2157561/1‑62 (MQ=255)
                                                                                        cAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGcc                                                        >  1:1600878/1‑150 (MQ=255)
                                                                                        cAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGcc                                                        >  1:1702478/1‑150 (MQ=255)
                                                                                        cAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGcc                                                        >  2:1334159/1‑150 (MQ=255)
                                                                                        cAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGcc                                                        >  1:2407355/1‑150 (MQ=255)
                                                                                          gCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTa                                                      <  2:840616/150‑1 (MQ=255)
                                                                                            gTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTAtt                                                    <  1:959650/150‑1 (MQ=255)
                                                                                            gTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTAtt                                                    >  1:1888196/1‑150 (MQ=255)
                                                                                             tgatgaTGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACt                                                                                                           <  2:1826737/94‑1 (MQ=255)
                                                                                             tgatgaTGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACt                                                                                                           >  1:1826737/1‑94 (MQ=255)
                                                                                             tgatgaTGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCAGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTg                                                   >  2:2396426/1‑150 (MQ=255)
                                                                                              gatgatGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGa                                                  <  1:2070830/150‑1 (MQ=255)
                                                                                               atgatgGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCtt                                                                 >  1:835612/1‑134 (MQ=255)
                                                                                               atgatgGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCtt                                                                 <  2:835612/134‑1 (MQ=255)
                                                                                                tgatgGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAgc                                                <  2:2207827/150‑1 (MQ=255)
                                                                                                tgatgGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAgc                                                <  1:352012/150‑1 (MQ=255)
                                                                                                 gatgGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAgcg                                               <  2:907139/150‑1 (MQ=255)
                                                                                                  atgGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAgcgc                                              <  2:494604/150‑1 (MQ=255)
                                                                                                  atgGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACAGGCTAACCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGAGCTTTCCACGGCCTATTGAgcgc                                              >  1:2399739/1‑150 (MQ=255)
                                                                                                        gATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAg                                                                                                 <  2:1309191/93‑1 (MQ=255)
                                                                                                        gATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTga                                        <  1:678319/150‑1 (MQ=255)
                                                                                                         aTCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGt                                                                                          >  2:2355432/1‑99 (MQ=255)
                                                                                                         aTCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGt                                                                                          <  1:2355432/99‑1 (MQ=255)
                                                                                                         aTCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTgag                                       >  2:2120125/1‑150 (MQ=255)
                                                                                                              gAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCa                                                                                                  <  2:125454/86‑1 (MQ=255)
                                                                                                              gAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCa                                                                                                  >  1:125454/1‑86 (MQ=255)
                                                                                                                aaaCTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAgc                                <  1:249041/150‑1 (MQ=255)
                                                                                                                   cTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGcgcc                             <  1:725790/150‑1 (MQ=255)
                                                                                                                    ttCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGCACTGGAAAGCCAGGTGCGGTTgg                                                                                       <  2:1182627/91‑1 (MQ=255)
                                                                                                                    ttCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTgg                                                                                       >  1:1182627/1‑91 (MQ=255)
                                                                                                                    ttCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGcgccg                            <  1:1825488/150‑1 (MQ=255)
                                                                                                                    ttCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGcgccg                            >  2:2420339/1‑150 (MQ=255)
                                                                                                                         ggAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCa                                                                                  <  2:1885993/91‑1 (MQ=255)
                                                                                                                         ggAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCa                                                                                  >  1:1885993/1‑91 (MQ=255)
                                                                                                                              gTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCt                                            >  2:1183138/1‑124 (MQ=255)
                                                                                                                                 ccTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCt               >  2:458474/1‑150 (MQ=255)
                                                                                                                                  cTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGc                                                         <  1:694870/107‑1 (MQ=255)
                                                                                                                                  cTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGc                                                         >  2:694870/1‑107 (MQ=255)
                                                                                                                                  cTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGCGCCGCACGGGCGGCGCTc              >  2:2282681/1‑150 (MQ=39)
                                                                                                                                  cTACCTGGACGAGCTGGCCCGCCAGCCGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTc              >  1:65521/1‑150 (MQ=255)
                                                                                                                                    aCCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCACGGGCGGCGCTcga            <  2:1702478/150‑3 (MQ=255)
                                                                                                                                     ccTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCg                                                                       >  2:2301276/1‑90 (MQ=255)
                                                                                                                                     ccTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCg                                                                       <  1:2301276/90‑1 (MQ=255)
                                                                                                                                     ccTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGt           >  2:215246/1‑150 (MQ=255)
                                                                                                                                      cTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTTAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGtc          <  2:1670875/150‑1 (MQ=255)
                                                                                                                                        ggACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCAc                                                            >  1:745855/1‑98 (MQ=255)
                                                                                                                                        ggACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCAc                                                            <  2:745855/98‑1 (MQ=255)
                                                                                                                                        ggACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCCGCGCTCCGtctc        >  2:1877828/1‑150 (MQ=255)
                                                                                                                                        gccgcaGCTGGCGGGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGtctc        >  2:227182/6‑150 (MQ=255)
                                                                                                                                          cgcaGCTGGCGGGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCt                                            <  2:678210/109‑1 (MQ=255)
                                                                                                                                           gcaGCTGGCGGGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCATCCAACGCCAGCTGGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTcaca     >  1:1614011/3‑150 (MQ=37)
                                                                                                                                            gAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAg    <  1:1359539/150‑1 (MQ=255)
                                                                                                                                            gAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGCGCCGCACGGGCGGCGCTcgatct         >  1:698040/1‑140 (MQ=38)
                                                                                                                                             aGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCg            >  1:1776603/1‑141 (MQ=255)
                                                                                                                                                tGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTgaga                                      <  1:299943/112‑1 (MQ=255)
                                                                                                                                                tGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTgaga                                      >  2:299943/1‑112 (MQ=255)
                                                                                                                                                    ccGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGCGCCGCACGGGCGGCGCTcgatc          >  1:1168306/1‑132 (MQ=38)
                                                                                                                                                    ccGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGACGGAGCGCCGCACGGGCGGCGCTcgatc          <  2:1168306/136‑5 (MQ=38)
                                                                                                                                                     |                                                                                                                                              
TGCATGCCGAGCTGAACAAGCCGCTGGACCCGGCCGAAGTGGCCCGCGCTGCGCAAACGCCGGAGATGGCTGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGATCAGGAAAACTTCATGGAGCGTGCCTACCTGGACGAGCTGGCCCGCCAGCTGCGGCTGGACCCGGGCTTGCGCCAGGAACTGGAAAGCCAGGTGCGGTTGGCTGCAGCGTAGTGGCGGTGCTTGCCACGGCCTATTGAGCGCCTGTGAGATCGAGCGCCGCCCGTGCGGCGCTCCGTCTCACAGGC  >  NC_002947/1691558‑1691849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑