| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,750,451 | A→C | 6.2% | Q29P (CAA→CCA) | PP_1550 → | Cro/CI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,750,451 | 0 | A | C | 6.2% | 375.8 / 14.1 | 130 | Q29P (CAA→CCA) | PP_1550 | Cro/CI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (55/67); new base C (4/4); total (59/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.86e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
AGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCTGTT > NC_002947/1750305‑1750600 | aGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATg > 1:515636/1‑150 (MQ=255) cATGCTTGTTTTGAATATGGAAGCATTCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATggg > 2:2040331/1‑150 (MQ=255) aTGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGc < 2:1571879/150‑1 (MQ=255) aTGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGc < 1:1408551/150‑1 (MQ=255) aTGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGc < 1:230082/150‑1 (MQ=255) tGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGc > 1:39309/1‑149 (MQ=255) cTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGa > 1:483946/1‑150 (MQ=255) ttGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAAt > 2:1293289/1‑142 (MQ=255) ttGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGAt > 2:68601/1‑150 (MQ=255) ttGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGAt > 2:463703/1‑150 (MQ=255) ttttGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGTGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGtt > 1:549179/1‑150 (MQ=255) ttttGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCCATTGGCGGacggc < 2:1408922/150‑5 (MQ=255) tttGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTc < 2:2135555/150‑1 (MQ=255) tGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCt < 2:2216571/150‑1 (MQ=255) aaTATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGa < 2:507506/150‑1 (MQ=255) tatGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGc < 2:1041800/150‑1 (MQ=255) gCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTCGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTc > 1:776755/1‑150 (MQ=255) aaGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGc > 2:1524247/1‑150 (MQ=255) gCATGCTTGAATGCCTGGACGAGCAGAAAATATCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCa > 1:1243105/1‑150 (MQ=255) cATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAg > 2:346842/1‑150 (MQ=255) ttGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCa > 2:1197831/1‑150 (MQ=255) gAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCaaa > 1:354582/1‑150 (MQ=255) aaTGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAAt > 1:556066/1‑150 (MQ=255) aTGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATc > 1:1737839/1‑150 (MQ=255) gCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGa < 2:1890758/150‑1 (MQ=255) cTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGTGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGc < 2:548257/150‑1 (MQ=255) cTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCt > 1:6954/1‑125 (MQ=255) cTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCt < 2:6954/125‑1 (MQ=255) cTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGc < 1:549417/150‑1 (MQ=255) cTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTAGTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGc > 1:161533/1‑150 (MQ=255) gACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGtt > 2:2181733/1‑150 (MQ=255) gACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGtt > 2:2094713/1‑150 (MQ=255) gACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGtt < 2:904279/150‑1 (MQ=255) gAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAAt > 2:1038328/1‑139 (MQ=255) gAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGa < 2:2362161/150‑1 (MQ=255) gAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGa < 1:856179/150‑1 (MQ=255) gAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGGCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAAt < 1:1038328/139‑1 (MQ=255) gCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGAcc > 1:283199/1‑150 (MQ=255) gCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGAcc > 2:1668897/1‑150 (MQ=255) agagGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCaa < 2:2224875/150‑1 (MQ=255) gaggTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGgc < 1:2094713/150‑1 (MQ=255) gaggTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGgc > 2:284686/1‑150 (MQ=255) tCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGgcgcgc < 2:2078126/150‑1 (MQ=255) tCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGgcgcgc < 1:178008/150‑1 (MQ=255) gCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTg > 2:1889338/1‑150 (MQ=255) cATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGaa < 2:556066/150‑1 (MQ=255) cATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGaa < 1:1889338/150‑1 (MQ=255) aCCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCa < 2:354582/150‑1 (MQ=255) cAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAgg < 2:283199/150‑1 (MQ=255) cAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAgg > 1:1853427/1‑150 (MQ=255) aaGAGCCAGGCAATCCAACATTTCGGGTCTATTTCCGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTc < 2:1605097/94‑1 (MQ=255) aaGAGCCAGGCAATCCAACATTTCGGGTCTATTTCCGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTc > 1:1605097/1‑94 (MQ=255) ccAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAACAg < 2:1853427/150‑1 (MQ=255) ccAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAg < 1:85277/150‑1 (MQ=255) gCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATg > 2:157276/1‑74 (MQ=255) gCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATg < 1:157276/74‑1 (MQ=255) cAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAg > 1:1057488/1‑117 (MQ=255) aCATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGc < 1:68601/150‑1 (MQ=255) aCATTTCGGGTCTAGTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGc < 2:161533/150‑1 (MQ=255) aTTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGt < 1:2181733/150‑1 (MQ=255) ttCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGa < 2:2389850/150‑1 (MQ=255) tCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGAc < 1:1668897/150‑1 (MQ=255) gggTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCt > 2:2273828/1‑150 (MQ=255) gggTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCt < 1:284686/150‑1 (MQ=255) ggTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCtt < 2:515636/150‑1 (MQ=255) gTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTg > 1:890083/1‑150 (MQ=255) tCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAg < 1:1540008/128‑1 (MQ=255) tCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAg > 2:1540008/1‑128 (MQ=255) tCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGt < 2:1737839/150‑1 (MQ=255) tCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGt < 1:1524247/150‑1 (MQ=255) aTTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGAcc > 1:1807438/1‑143 (MQ=255) aTTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGAcc < 2:1807438/143‑1 (MQ=255) aTTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGa > 1:2022406/1‑150 (MQ=255) ttCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGaaa < 2:2022406/150‑1 (MQ=255) ccgggCGAGGGCGGTAGGGGTGACCGATGAGGCCTTCCGCCAATGGGCGGATGTTCCTGGGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGTTTGCCGCTGCGTGACCTTGTAGAAATTTTCa < 2:891000/147‑1 (MQ=255) ccTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCa > 1:403688/1‑150 (MQ=255) cTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCAc < 2:403688/150‑1 (MQ=255) gAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAgg > 2:1836123/1‑89 (MQ=255) gAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAgg < 1:1836123/89‑1 (MQ=255) aGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTg < 1:2089168/150‑1 (MQ=255) gcgcTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGc > 1:1171978/1‑150 (MQ=255) tGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCag < 2:1171978/150‑1 (MQ=255) tGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCag < 2:1039374/150‑1 (MQ=255) cTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCagtagt < 1:463703/150‑1 (MQ=255) tATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGttt < 2:463687/62‑1 (MQ=255) tGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTggg < 1:903259/150‑1 (MQ=255) tGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTggg < 2:1863216/150‑1 (MQ=255) gAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAATGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTgggg < 1:1983442/150‑1 (MQ=255) ccGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGt > 2:110847/1‑150 (MQ=255) acatCCGCCCATTGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGt > 2:2075433/4‑150 (MQ=255) acatCCGCCCATTGGCGGACGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGaaa < 1:1846563/109‑1 (MQ=255) acatCCGCCCATTGGCGGACGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGaaa > 2:1846563/4‑112 (MQ=255) cGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTg > 2:1299883/1‑142 (MQ=255) cGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTg < 1:1299883/142‑1 (MQ=255) cGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGAccct > 1:1424718/1‑98 (MQ=255) gCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCt < 2:799502/150‑1 (MQ=255) ccAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCa < 2:1933085/111‑1 (MQ=255) ccAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTgggg > 1:265821/1‑139 (MQ=255) cAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCTGt > 2:2239750/1‑150 (MQ=255) aaTGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTCTGGAATCCGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCTGtt < 1:1969653/150‑1 (MQ=255) | AGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCTGTT > NC_002947/1750305‑1750600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |