| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,750,454 | G→T | 6.3% | W30L (TGG→TTG) | PP_1550 → | Cro/CI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,750,454 | 0 | G | T | 6.3% | 407.7 / 11.0 | 126 | W30L (TGG→TTG) | PP_1550 | Cro/CI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (52/66); new base T (4/4); total (56/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.33e-01 | |||||||||||
Only 100 of 132 total aligned reads displayed.
AGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCTGTTCAG > NC_002947/1750305‑1750603 | aGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATg > 1:515636/1‑150 (MQ=255) aTGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGc < 1:1408551/150‑1 (MQ=255) aTGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGc < 1:230082/150‑1 (MQ=255) gCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCgg > 2:2089168/1‑150 (MQ=255) ttGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGAt > 2:68601/1‑150 (MQ=255) ttGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGAt > 2:463703/1‑150 (MQ=255) ttttGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGTGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGtt > 1:549179/1‑150 (MQ=255) ttttGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGTGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGtt > 1:548257/1‑150 (MQ=255) tttGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTc < 2:2135555/150‑1 (MQ=255) tGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCt < 2:2216422/150‑1 (MQ=255) tGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCt < 2:2216571/150‑1 (MQ=255) aaTATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGa < 2:507506/150‑1 (MQ=255) tatGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGc < 2:1041800/150‑1 (MQ=255) gCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTC‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTc > 1:776755/1‑150 (MQ=255) aaGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGc > 2:1524247/1‑150 (MQ=255) aaGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGACCA‑GCACAACCCTTTTGCCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGc > 2:1882486/1‑150 (MQ=255) cATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAg > 2:346842/1‑150 (MQ=255) gCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTAc > 1:2291703/1‑150 (MQ=255) ttGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCa > 2:1197831/1‑150 (MQ=255) gAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCaaa > 1:354582/1‑150 (MQ=255) aaTGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAAt > 1:556066/1‑150 (MQ=255) aTGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATc > 1:1737839/1‑150 (MQ=255) cTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGTGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGc < 2:548257/150‑1 (MQ=255) cTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCt < 2:6954/125‑1 (MQ=255) cTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTAGTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGc > 1:161533/1‑150 (MQ=255) gACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGtt > 2:2181733/1‑150 (MQ=255) gACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGtt < 2:904279/150‑1 (MQ=255) gAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGGCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAAt < 1:1038328/139‑1 (MQ=255) gCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGAcc > 2:1668897/1‑150 (MQ=255) gaggTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGgc > 2:284686/1‑150 (MQ=255) gTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGGTTGACCAAGGgcgcg > 2:1582829/1‑150 (MQ=255) tCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGgcgcgc < 2:2078126/150‑1 (MQ=255) tCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGgcgcgc < 1:178008/150‑1 (MQ=255) gCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTg > 2:1889338/1‑150 (MQ=255) cATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGaa < 1:346842/150‑1 (MQ=255) cATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGaa < 2:556066/150‑1 (MQ=255) cATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGaa < 1:2040331/150‑1 (MQ=255) cATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGaa < 1:1889338/150‑1 (MQ=255) aCCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCa < 2:354582/150‑1 (MQ=255) aaGAGCCAGGCAATCCAACATTTCGGGTCTATTTCCGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTc < 2:1605097/94‑1 (MQ=255) aaGAGCCAGGCAATCCAACATTTCGGGTCTATTTCCGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTc > 1:1605097/1‑94 (MQ=255) ccAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAg < 1:85277/150‑1 (MQ=255) ccAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAg > 2:2267584/1‑150 (MQ=255) ggCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGa > 1:799502/1‑150 (MQ=255) gCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATg < 1:157276/74‑1 (MQ=255) gCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATg > 2:157276/1‑74 (MQ=255) cAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAg < 2:1057488/117‑1 (MQ=255) cAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAg > 1:1057488/1‑117 (MQ=255) cAACATTTCGGCTATATGTAAGCCCTGGCGAGGGCGCTG‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCt > 2:1969653/1‑150 (MQ=255) aCATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGc < 1:68601/150‑1 (MQ=255) aTTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGt < 1:2181733/150‑1 (MQ=255) ttCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGa < 2:2389850/150‑1 (MQ=255) tCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGAc < 1:1668897/150‑1 (MQ=255) gggTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCt > 2:2273828/1‑150 (MQ=255) gggTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCt < 1:284686/150‑1 (MQ=255) ggTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGaaaa < 1:914099/129‑1 (MQ=255) ggTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCtt < 2:515636/150‑1 (MQ=255) gTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTg > 1:890083/1‑150 (MQ=255) gTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTg < 1:584633/150‑1 (MQ=255) tCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAg > 2:1540008/1‑128 (MQ=255) tCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAg < 1:1540008/128‑1 (MQ=255) tCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGt < 1:1524247/150‑1 (MQ=255) tCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGt < 2:1737839/150‑1 (MQ=255) aTTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGAcc > 1:1807438/1‑143 (MQ=255) aTTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGa > 1:2022406/1‑150 (MQ=255) ttCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGaaa < 2:2022406/150‑1 (MQ=255) ccgggCGAGGGCGGTA‑GGGGTGACCGATGAGGCCTTCCGCCAATGGGCGGATGTTCCTGGGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGTTTGCCGCTGCGTGACCTTGTAGAAATTTTCa < 2:891000/147‑1 (MQ=255) ccTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCa > 1:403688/1‑150 (MQ=255) cTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCAc < 2:403688/150‑1 (MQ=255) gAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAgg > 2:1836123/1‑89 (MQ=255) gAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAgg < 1:1836123/89‑1 (MQ=255) aGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTg < 1:2089168/150‑1 (MQ=255) gcgcTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGc > 1:1171978/1‑150 (MQ=255) gggTGACCTATGAGGCCGTCCGCCAATGGGCTGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTgcgc > 2:1231931/1‑150 (MQ=255) tGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCag < 2:1039374/150‑1 (MQ=255) tGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCag < 2:1171978/150‑1 (MQ=255) cTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCagtagt < 1:463703/150‑1 (MQ=255) tATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGttt > 1:463687/1‑62 (MQ=255) tATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGttt < 2:463687/62‑1 (MQ=255) tGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTggg < 1:903259/150‑1 (MQ=255) tGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTggg < 2:1863216/150‑1 (MQ=255) acatCCGCCCATTGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGt < 2:1673806/104‑1 (MQ=255) acatCCGCCCATTGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGt > 2:2075433/4‑150 (MQ=255) acatCCGCCCATTGGCGGACGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGaaa < 1:1846563/109‑1 (MQ=255) acatCCGCCCATTGGCGGACGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGaaa > 2:1846563/4‑112 (MQ=255) cGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTg > 2:1299883/1‑142 (MQ=255) cGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTg < 1:1299883/142‑1 (MQ=255) atCCGCCCATTGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAg > 1:1839655/2‑83 (MQ=255) atCCGCCCATTGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAg < 2:1839655/82‑1 (MQ=255) cGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGAccct > 1:1424718/1‑98 (MQ=255) cGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGAccct < 2:1424718/100‑3 (MQ=255) gCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCt < 2:799502/150‑1 (MQ=255) ccAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCa > 1:1933085/1‑111 (MQ=255) ccAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCa < 2:1933085/111‑1 (MQ=255) ccAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTgggg < 2:265821/139‑1 (MQ=255) ccAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTgggg > 1:265821/1‑139 (MQ=255) cAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCTGt > 2:2239750/1‑150 (MQ=255) aaTGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTCTGGAATCCGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCTGtt < 1:1969653/150‑1 (MQ=255) tGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCTGTTCa > 2:2404111/1‑150 (MQ=255) gggCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCTGTTCAg < 1:1197831/150‑1 (MQ=255) | AGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTA‑GGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAGCTTCGCCAGTACCAAATCGAGCGTTTGACCAAGGGCGCGCTGAAGGCAGGGAAAAGGGATGCCGCTGCGTGACCTTGTAGAAATTTTCACCTATCTGGCCTTGCGCCAGTAGTGGGGCCGTCCAGCTGTTCAG > NC_002947/1750305‑1750603 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |