BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,949,099	C→A	5.2%	C200F (TGC→TTC)	PP_1749 ←	acetyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,949,099	0	C	A	5.2%	338.9 / 2.1	109	C200F (TGC→TTC)	PP_1749	acetyltransferase
Reads supporting (aligned to +/- strand): ref base C (52/51); new base A (3/3); total (55/54)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01

Only 100 of 110 total aligned reads displayed.

GGCAGGTTGCGAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGG  >  NC_002947/1948952‑1949248

ggCAGGTTGCGAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAg                                                                                                                                                     <  2:2125579/150‑1 (MQ=255)

   aGGTTGCGAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAgtgt                                                                                                                                                  <  2:1671921/150‑1 (MQ=255)

     gTTGCGAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCTACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCGCCCCGGCGTGGGTGAAgtgctg                                                                                                                                                <  2:632514/150‑4 (MQ=255)

     gTTGCGAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAgtgctg                                                                                                                                                <  1:1806573/150‑4 (MQ=255)

     gTTGCGAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTgg                                                                                                                                                <  2:1173746/150‑1 (MQ=255)

     gTTGCGAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGCTGGCGCACCACCACTTCACCCACGCCGGGGCGGGTGCAGTGTgg                                                                                                                                                >  2:223933/1‑150 (MQ=255)

      ttGCGAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTggg                                                                                                                                               <  1:1684744/150‑1 (MQ=255)

          gAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGGACCGAGAGGTCCAGGTAGGCCTGGCAACGGGTCATTGGTTTTTCCTTCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCa                                                                                                                                           >  1:1749393/1‑150 (MQ=255)

          gAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTGCACCCGCCCCGGCGTGGGTGAAgtgctggt                                                                                                                                              >  2:1386743/1‑142 (MQ=38)

          gAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTGCACCCGCCCCGGCGTGGGTGAAgtgctggt                                                                                                                                              <  1:1386743/147‑6 (MQ=38)

                ccAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCa                                                                                                                                     >  2:47200/1‑150 (MQ=255)

                  aGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAgg                                                                                                                                   >  1:285831/1‑150 (MQ=255)

                      tCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCTGGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGcacc                                                                                                                               <  1:523545/150‑1 (MQ=255)

                          gTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAg                                                                                                                           <  1:95515/150‑1 (MQ=255)

                              aGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGgctg                                                                                                                       >  2:1533798/1‑150 (MQ=255)

                              aGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGgctg                                                                                                                       >  1:2418019/1‑150 (MQ=255)

                                gcgcTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACcaca                                                                                                                            <  2:902911/143‑1 (MQ=255)

                                   cTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGcc                                                                                                                  <  1:308907/150‑1 (MQ=255)

                                     tGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCAt                                                                                                                <  1:706282/150‑1 (MQ=255)

                                         cTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTgg                                                                                                                                                <  1:1142473/114‑1 (MQ=255)

                                         cTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTc                                                                                                            >  2:1690744/1‑150 (MQ=255)

                                          tGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCg                                                                                                           >  2:1334386/1‑150 (MQ=255)

                                            gCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCggg                                                                                                         <  2:1074835/150‑1 (MQ=255)

                                            gCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCggg                                                                                                         <  1:1839765/150‑1 (MQ=255)

                                            gCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCggg                                                                                                         <  1:1016562/150‑1 (MQ=255)

                                             cGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCgggg                                                                                                        <  2:155750/150‑1 (MQ=255)

                                                 tGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCAt                                                                                                    <  1:1533798/150‑1 (MQ=255)

                                                  gTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCCGGCCGCGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATc                                                                                                   <  2:919709/150‑1 (MQ=255)

                                                   tCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCGCGGGGTCATCg                                                                                                  >  2:519027/1‑150 (MQ=255)

                                                     gTGCAGCCCCGACACGCCTCGATAGGTAAAGACACGGCTCAGTAGGGGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGaa                                                                                                >  2:1845267/1‑150 (MQ=255)

                                                     gTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGAACCACAGGCTGCTGCCATGCTCGGGGTCATCGaa                                                                                                >  1:377901/1‑150 (MQ=255)

                                                             ccGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTgg                                                                                        >  1:844851/1‑150 (MQ=255)

                                                               gACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGAACCACATGCAGCTGCCATGCTCGGGGTCATCGAACGCCTTGgtg                                                                                      >  2:1379845/1‑150 (MQ=255)

                                                                aCAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGgtgt                                                                                     >  2:2448439/1‑150 (MQ=255)

                                                                 cAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGtgtg                                                                                    <  2:2290045/150‑1 (MQ=255)

                                                                     tCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTc                                                                                >  2:519855/1‑150 (MQ=255)

                                                                       cAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTgg                                                                                                                                                >  1:342498/1‑84 (MQ=255)

                                                                       cAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTgg                                                                                                                                                <  2:342498/84‑1 (MQ=255)

                                                                        aGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGgt                                                                                       >  2:1601893/1‑140 (MQ=255)

                                                                        aGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGgt                                                                                       <  1:1601893/140‑1 (MQ=255)

                                                                        aGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAgg                                                                             <  1:519855/150‑1 (MQ=255)

                                                                            aggccaggccACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCa                                                                         <  1:47200/150‑1 (MQ=255)

                                                                                caggccaCGGCTCATGAAGTGTTCGATCAGGTGAAGCACCAGCACTTCACACACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGAc                                                                     >  1:90024/1‑150 (MQ=255)

                                                                                caggccaCGGCTCATGAAGTGTTCGAACAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGAc                                                                     >  1:1025903/1‑150 (MQ=255)

                                                                                   gccaCGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCAt                                                                                                    >  1:54544/1‑116 (MQ=255)

                                                                                   gccaCGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCAt                                                                                                    <  2:54544/116‑1 (MQ=255)

                                                                                     caCGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGc                                                                <  1:2102563/150‑1 (MQ=255)

                                                                                     caCGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGc                                                                <  2:844851/150‑1 (MQ=255)

                                                                                     caCGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGc                                                                <  1:171892/150‑1 (MQ=255)

                                                                                      aCGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTgg                                                                                   >  1:877102/1‑130 (MQ=255)

                                                                                      aCGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTgg                                                                                   <  2:877102/130‑1 (MQ=255)

                                                                                           tCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATaa                                                          <  2:838324/150‑1 (MQ=255)

                                                                                           tCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATaa                                                          >  1:1052495/1‑150 (MQ=255)

                                                                                           tCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCAAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTCGTGTCGATCAGTCCCATGACGCTGCCGATaa                                                          >  2:1098890/1‑150 (MQ=255)

                                                                                              tGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGc                                                                <  2:1309076/141‑1 (MQ=255)

                                                                                              tGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCGTGGTGTGGTTCAGGCCCATGACGCTGc                                                                >  1:1309076/1‑141 (MQ=255)

                                                                                                 aGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAg                                                                                                                           <  2:1350132/79‑1 (MQ=255)

                                                                                                   tgtTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGcgccg                                                  >  2:1784831/1‑150 (MQ=255)

                                                                                                        gATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTc                                             >  1:1050788/1‑150 (MQ=255)

                                                                                                        gATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTc                                             <  2:285831/150‑1 (MQ=255)

                                                                                                        gATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCAATGCTCAGCGGAAACGAACTCCTGGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTc                                             >  1:2113315/1‑150 (MQ=255)

                                                                                                         aTCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCt                                            >  1:980890/1‑150 (MQ=255)

                                                                                                           cAGGTGGCGCACCAGCACTTCCCCTACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCtaa                                          <  1:83186/150‑3 (MQ=255)

                                                                                                              gTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCggg                                                                                                         <  2:1976428/84‑1 (MQ=255)

                                                                                                              gTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCggg                                                                                                         >  1:1976428/1‑84 (MQ=255)

                                                                                                              gTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGa                                                             >  2:2199515/1‑128 (MQ=255)

                                                                                                              gTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGa                                                             <  1:2199515/128‑1 (MQ=255)

                                                                                                              gTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGAAGTGTGGGTCCGTCTCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTc                                       >  1:1003236/1‑150 (MQ=255)

                                                                                                               tGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTcc                                      <  2:1003236/150‑1 (MQ=255)

                                                                                                                   gcACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTg                                  >  1:475901/1‑150 (MQ=255)

                                                                                                                      cgaGCACTTCACCCGCGCCGGGGCGGGTGCAGTGTGGGTCCACCGTCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGGGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTgcca                               <  2:1151925/148‑1 (MQ=255)

                                                                                                                      ccAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGc                                                                <  1:616132/117‑1 (MQ=255)

                                                                                                                      ccAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGc                                                                >  2:616132/1‑117 (MQ=255)

                                                                                                                       ccacACTGCACCCGCCCCGGCGTGGGTGAAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTgccag                              >  1:2412499/4‑150 (MQ=255)

                                                                                                                       cAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTgccag                              >  1:1010844/1‑150 (MQ=255)

                                                                                                                         gCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGtgtg                                                                                    >  2:822833/1‑94 (MQ=255)

                                                                                                                         gCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGtgtg                                                                                    <  1:822833/94‑1 (MQ=255)

                                                                                                                         gCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTgccagcc                            <  1:933810/150‑1 (MQ=255)

                                                                                                                         gCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTgccagcc                            >  1:803747/1‑150 (MQ=255)

                                                                                                                           aCTTCACCCACGAAAGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCaa                          <  1:491823/150‑1 (MQ=255)

                                                                                                                             ttCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATa                        >  1:2227032/1‑150 (MQ=255)

                                                                                                                             ttCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATa                        <  1:2440831/150‑1 (MQ=255)

                                                                                                                                 cccACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTAGTTCAGGCCCATGACGCTGCCGAGAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACAcc                    >  2:673574/1‑150 (MQ=255)

                                                                                                                                  ccACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCg                   >  1:1628030/1‑150 (MQ=255)

                                                                                                                                  ccACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCg                   >  2:687439/1‑150 (MQ=255)

                                                                                                                                   cgcGCCGGGGCGCGTGCTGTGTGGGTACACCGCCAGGCCCCACGGGCTGCGTCCATGCTCGGGGTCATCGAACGCCTTGGTGTCGTTCAGGCCCGTGACGCCGCTAATAATCGCGTCGCTGTCTTCGTCCTCTGCCAGCCAATACACCgg                  <  2:1127923/148‑1 (MQ=255)

                                                                                                                                   cACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCGTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCgg                  <  1:1379845/150‑1 (MQ=255)

                                                                                                                                         ggggCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGAAGCTAATCGCGCCGCTGATGACCGCCGCGGCCAGCCAATACACCGGGCCaag            >  2:259869/1‑148 (MQ=255)

                                                                                                                                            gtgggTGAAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCGCCCaa         <  2:581430/148‑1 (MQ=255)

                                                                                                                                            gCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCaa         <  1:987608/150‑1 (MQ=255)

                                                                                                                                            gCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCaa         >  1:2010193/1‑150 (MQ=255)

                                                                                                                                              gggTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTgg                                                                                   >  2:1122032/1‑74 (MQ=255)

                                                                                                                                              gggTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTgg                                                                                   <  1:1122032/74‑1 (MQ=255)

                                                                                                                                              gggTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGt       <  1:223933/150‑1 (MQ=255)

                                                                                                                                              gggTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGt       >  2:2117822/1‑150 (MQ=255)

                                                                                                                                                gTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGGGc     >  1:1151454/1‑150 (MQ=255)

                                                                                                                                                gTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAATGc     >  1:824416/1‑150 (MQ=255)

                                                                                                                                                  gCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCg   <  1:631540/150‑1 (MQ=255)

                                                                                                                                                  gCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGACAGCCAATACACCGGGCCACCCAAGTGCCg   <  2:90024/150‑1 (MQ=255)

                                                                                                                                                   cAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCgg  <  2:1025903/150‑1 (MQ=255)

GGCAGGTTGCGAAAACCCAGTTTCTGGTACAGGCGCTTGGCCTGGCGGTTGTCGTGCAGCACCGACAGGTCCAGGTAGGCCAGGCCACGGCTCATGAAGTGTTCGATCAGGTGGCGCACCAGCACTTCACCCACGCCGGGGCGGGTGCAGTGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGG  >  NC_002947/1948952‑1949248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`