| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,955,252 | T→A | 12.3% | intergenic (+39/‑154) | PP_1752 → / → PP_1753 | hypothetical protein/DMT superfamily permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,955,252 | 0 | T | A | 12.3% | 311.5 / 32.2 | 114 | intergenic (+39/‑154) | PP_1752/PP_1753 | hypothetical protein/DMT superfamily permease |
| Reads supporting (aligned to +/- strand): ref base T (51/49); new base A (6/8); total (57/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.80e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
ATTGCCCCTTGGACGCTGGTGGAGGCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACGGGCTTGATCGAG > NC_002947/1955103‑1955399 | ccTTGGACGCTGGTGGAGGCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCcg > 1:2367370/1‑150 (MQ=255) cTTGGACGCTGGTGGAGGCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCcgc < 2:1173466/150‑1 (MQ=255) aCGCTGGTGGAGGCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTAAACCCGCGaagc < 1:2336796/150‑3 (MQ=255) cGCTGGTGGAGGCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGGGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAgg < 1:287812/150‑1 (MQ=255) cTGGTGGAGGCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGt < 1:254180/150‑1 (MQ=255) tggtggAGGCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGTCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTAACCGCGAAAGGGTc > 2:300059/1‑150 (MQ=255) ggtggAGGCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCa < 1:1270543/150‑1 (MQ=255) ggtggAGGCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTGCTGACCCTTTCGCGGGTAAACCCGCGaagcggcca < 2:1673722/150‑8 (MQ=37) ggCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCCACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTGCTGACCCTTTCGCGGGTAAACCCGCGAAGCGGCCAGAACAg < 1:1452042/150‑1 (MQ=25) ggCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAg < 2:1292745/150‑1 (MQ=255) gCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAgg > 2:1933666/1‑150 (MQ=255) gCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAgg < 1:449924/150‑1 (MQ=255) gCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAgg < 1:2001824/150‑1 (MQ=255) ccAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGc > 1:19869/1‑150 (MQ=255) ccAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGAACAATACTTTTTTGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGc > 1:1971063/1‑150 (MQ=255) cAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACACGAAACAGGAGCTCGT‑ATGCCGTCTTCTGCTTGCCGCTTCGCGGGTTTACCCGCGACAGGGTCAGCACAGGCa > 1:2112381/1‑150 (MQ=255) cAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCt > 2:1481642/1‑150 (MQ=255) cAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCt < 2:37315/150‑1 (MQ=255) aaGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTAAACCCGCGaa > 2:852805/1‑127 (MQ=255) aaGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTAAACCCGCGaa < 1:852805/127‑1 (MQ=255) gggCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGTCTCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAg < 1:1356943/150‑1 (MQ=255) ggCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGc > 1:1501632/1‑150 (MQ=255) ggTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGcc > 2:368703/1‑150 (MQ=255) tGAAGGTGGTGCGCACAATCAACCAGGCTTCTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGcccc > 1:1023939/1‑150 (MQ=255) gAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCa > 1:1764146/1‑150 (MQ=255) gtggtgCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGGAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAg > 2:1024820/1‑150 (MQ=255) gtggtgCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGc < 1:978073/137‑1 (MQ=255) gtgCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCAAAAAGAAt > 2:1315741/1‑150 (MQ=255) cgcACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGAc > 1:1005953/1‑150 (MQ=255) cgcACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGAc < 1:68868/150‑1 (MQ=255) aTCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAgg > 2:417297/1‑108 (MQ=255) aTCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAgg < 1:417297/108‑1 (MQ=255) aaCCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAAt > 2:1472210/1‑150 (MQ=255) aaCCAGGCGATTGAGGCGGCGTTTGCGAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CGTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAAt > 2:628892/1‑150 (MQ=255) aCCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTAAACCCGCGaa < 1:804901/90‑1 (MQ=255) aCCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTAAACCCGCGaa > 2:804901/1‑90 (MQ=255) ccAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTc < 1:1481642/150‑1 (MQ=255) cAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCt > 1:1491179/1‑150 (MQ=255) gcTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAAt < 2:1262192/130‑1 (MQ=255) ttGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGACGTTA‑CCCGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCg < 1:855204/150‑1 (MQ=255) gAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCACCAGAATGACCTGATGAATTCTTTTCTCGGc < 1:1024820/150‑1 (MQ=255) gAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCg > 1:2057556/1‑148 (MQ=255) gTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCa < 1:1315741/150‑1 (MQ=255) cAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCaa < 2:2095918/82‑1 (MQ=255) cAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCaa > 1:2095918/1‑82 (MQ=255) cAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGCTGAAGTCTTTTCTCGGCACTCTCCACCGtct > 1:691/1‑150 (MQ=255) cAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGtct > 2:944805/1‑150 (MQ=255) cAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGtct > 1:2277430/1‑150 (MQ=255) aaGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGaa > 1:375423/1‑110 (MQ=255) aaGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGaa < 2:375423/110‑1 (MQ=255) aaGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGtctc > 1:1017638/1‑150 (MQ=255) aGCACAAGAAATAGCCGAAGGTGCAGGAG‑TTTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTctct < 1:793/150‑1 (MQ=255) aGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTctct < 2:942777/150‑1 (MQ=255) cacnAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGt > 2:1496899/1‑150 (MQ=255) cacaAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTAAACCCGCGaa < 1:810996/61‑1 (MQ=37) cacaAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTAAACCCGCGaa > 2:810996/1‑61 (MQ=21) acaAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGcaca > 2:2312100/1‑72 (MQ=255) acaAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGcaca < 1:2312100/72‑1 (MQ=255) acaAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGtc > 1:1158432/1‑150 (MQ=255) caAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGtcc > 2:1976210/1‑150 (MQ=255) caAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCGCGGCACTCTCCACCGTCTCTGtcc < 1:944805/150‑1 (MQ=255) aaGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGca < 2:951241/68‑1 (MQ=255) aaGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGca > 1:951241/1‑68 (MQ=255) gAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGCATGACCTGATGAATTCTTTTCGCGGCACTCTCCACCGTCTCTGtcctcc > 2:896636/1‑150 (MQ=255) gAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGtcctcc < 2:1764146/150‑1 (MQ=255) aaaTAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCa < 2:1023939/150‑1 (MQ=255) gCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAAcccc < 1:368703/150‑1 (MQ=255) cGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCaa > 1:320002/1‑65 (MQ=255) cGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCaa < 2:320002/65‑1 (MQ=255) gAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTa > 2:617525/1‑150 (MQ=255) gAAGGTAAGGTTA‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCCGCACAAACCATTGTTCCACCCAGCAACGACCCAAAAGAATGACCTGATGACTTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTa < 1:768369/150‑1 (MQ=255) tGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAAtt < 2:1017638/150‑1 (MQ=255) aGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTca > 1:1471237/1‑150 (MQ=255) aGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTca > 1:1471295/1‑150 (MQ=255) ttG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTcaaca > 2:69550/1‑150 (MQ=255) g‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCaacaac < 2:1325513/150‑1 (MQ=255) cTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGtct > 1:91812/1‑118 (MQ=255) cTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGtct < 2:91812/118‑1 (MQ=255) cTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAAccc > 1:1189859/1‑150 (MQ=255) cTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAAccc > 1:84057/1‑150 (MQ=255) cTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACATACGCCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAAccc > 1:2125256/1‑150 (MQ=255) ggCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCcaccac > 2:1091605/1‑150 (MQ=255) gCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACGCCTCCACCCAGCGATGCCCCAAAAGAATGACCTGAGGAATTCTTTTCTCGGCACTCTCACCCGTGTCTGTCCTCCAACCCCGTAGAATTCAGCAACCCCCACCACg > 1:1177066/1‑150 (MQ=255) accctttCGCGGGTAAACCCGCGAAGGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACg > 2:1049061/6‑150 (MQ=255) ccGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCtgat > 1:765880/1‑79 (MQ=255) ccGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCtgat < 2:765880/79‑1 (MQ=255) ccGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACgg < 1:1496899/150‑1 (MQ=255) ccGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACgg < 1:1472210/150‑1 (MQ=255) ccGCTTCGCGGGTTTACCCGCGAAAGGGACCCCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCATCCAACCCCGTAGAATTCAACAACCCCCACCACgg > 1:377317/1‑150 (MQ=255) cGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCaa > 1:2234355/1‑119 (MQ=255) cGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCaa < 2:2234355/119‑1 (MQ=255) ttCGCGGGTAAACCCGCGAAGCGGCCAGAACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACGGGCtt < 2:1636808/150‑1 (MQ=38) ttCGCGGGTAAACCCGCGAAAGGGTCAGTACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACGGGCtt > 2:2263347/1‑150 (MQ=255) ttCGCGGGTAAACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAAt < 2:1783383/127‑1 (MQ=255) ttCGCGGGTAAACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAAt > 1:1783383/1‑127 (MQ=255) cgcgGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACGGGCTTGa < 2:2112381/150‑1 (MQ=255) gcgGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACGGGCTTGAt > 2:411300/1‑150 (MQ=255) ggTTTACCCGCGAAAGGGTCAGCACAGTAATCACCTCCTCCCAGCCATGCCCCAACAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACGGGCTTGATCGa < 2:1839144/150‑1 (MQ=255) ggTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAGCCCCGTAGAATTCAACAACCCCCACCACGGGCTTGATCGa < 2:691/150‑1 (MQ=255) gTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACGGGCTTGATCGAg < 2:2277430/150‑1 (MQ=255) | ATTGCCCCTTGGACGCTGGTGGAGGCCAATGACAAGCGCTGGGCGCGGGTGAAGGTGGTGCGCACAATCAACCAGGCGCTTGAGGCGGCGTTTGCCAAGCACAAGAAATAGCCGAAGGTGAGGTTG‑CCTGTTCTGGCCGCTTCGCGGGTTTACCCGCGAAAGGGTCAGCACAGGCAACACCTCCACCCAGCCATGCCCCAAAAGAATGACCTGATGAATTCTTTTCTCGGCACTCTCCACCGTCTCTGTCCTCCAACCCCGTAGAATTCAACAACCCCCACCACGGGCTTGATCGAG > NC_002947/1955103‑1955399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |