| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,010,503 | T→A | 5.7% | E325V (GAA→GTA) ‡ | PP_1792 ← | group 2 family glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,010,503 | 0 | T | A | 5.7% | 274.5 / 6.4 | 89 | E325V (GAA→GTA) ‡ | PP_1792 | group 2 family glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base T (39/44); new base A (3/2); total (42/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.73e-01 | |||||||||||
GCCTTGTGGCCCGTCGCGGTCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGAACCTGGATGGGAT > NC_002947/2010355‑2010651 | gCCTTGTGGCCCGTCGCGGTCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTc > 2:1915099/1‑150 (MQ=255) ccTTGTGGCCCGTCGCGGTCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCa > 2:654979/1‑150 (MQ=255) ttGTGGCCCGTCGCGGCCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCaa > 1:1133816/1‑149 (MQ=255) ttGTGGCCCGTCGCGGCCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCaa < 2:1133816/149‑1 (MQ=255) tgGCCCGTCGCGGTCAGCATGGACGTCGGCCCAGTCGCAACCTTCCACCAGCAAATTGCGCGGACCTGTTGGCGCGCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGc < 1:43406/150‑1 (MQ=255) ggCCCGTCGCGGTCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCg > 1:899818/1‑150 (MQ=255) gCCCGTCGCGGTCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCgg > 2:2331188/1‑150 (MQ=255) tCGCGGTCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGga > 2:1630496/1‑148 (MQ=255) tCGCGGTCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGga < 1:1630496/148‑1 (MQ=255) ggTCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGt < 1:1000972/150‑1 (MQ=255) acaGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGc < 2:1858885/150‑1 (MQ=255) aGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCg > 2:86605/1‑150 (MQ=255) gTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCgg > 2:439399/1‑150 (MQ=255) cGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCgggg < 2:1054786/150‑1 (MQ=255) aTAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCCGCGGTGGTTCAACTGCGGGGAGAAGGTCGGCCGGggcggc > 1:500756/1‑150 (MQ=255) cccAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCg < 1:654979/150‑1 (MQ=255) cAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGcc > 1:1913677/1‑150 (MQ=255) gcgcAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGt < 2:955674/150‑1 (MQ=255) gcAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTg > 1:2237190/1‑150 (MQ=255) gcAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGATGCCAGCAATCGATCAAATCACTGCAGCAGATCTGCCGGGGCAGCCGTCGCCAGTTg > 2:1453941/1‑150 (MQ=255) aaCCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGAt < 2:1436509/150‑1 (MQ=255) aaCCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGAt > 2:1683516/1‑150 (MQ=255) aaCCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACGCCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGAt > 1:1204816/1‑150 (MQ=255) cccTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATg < 2:563158/149‑1 (MQ=255) aCCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATg < 1:1384267/150‑1 (MQ=255) tcctccAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGaca < 2:1850468/150‑1 (MQ=255) tccgccAGCAAATCGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCCGCAGCGATCTGGACAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGaca < 2:1300609/150‑1 (MQ=255) cctccAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTTTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGCGCTTTCCGGCCGGGGCAGCCTTCGCCAGTTGATGGacac < 1:789763/150‑1 (MQ=255) cAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTc < 1:586235/150‑1 (MQ=255) gCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAg > 2:419314/1‑150 (MQ=255) gCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTCTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAg > 2:1875865/1‑150 (MQ=255) cAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGc < 2:1787748/150‑1 (MQ=255) cAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGc < 2:899818/150‑1 (MQ=255) cAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGc < 1:1601787/150‑1 (MQ=255) gCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATc > 2:396172/1‑150 (MQ=255) gAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGc > 2:2219098/1‑150 (MQ=255) gAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGc > 1:573510/1‑150 (MQ=255) ggctcgcCATGCATCGGGGCGCAAGTCTGTCCTCTCCGGCGATATCGATAATGCTGTAGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCa < 2:500756/146‑1 (MQ=255) gcCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTa > 2:148331/1‑150 (MQ=255) aTGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCg > 1:1114141/1‑150 (MQ=255) cTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGc < 1:86605/150‑1 (MQ=255) ggggCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGa > 1:2431260/1‑150 (MQ=255) gggCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGAt < 2:2431260/150‑1 (MQ=255) ggCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGAtt < 2:338268/150‑1 (MQ=255) ccAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGAtttttt > 1:1246824/1‑150 (MQ=255) cAGTTTCTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTc < 1:1875865/150‑1 (MQ=255) aaGTTCGTCAACTGCAGCGATCTGGATAAGTCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTc < 2:1961091/149‑1 (MQ=255) gTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTACCGAGGCTGATTTTTTCga < 1:419314/150‑1 (MQ=255) tttGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCgag < 1:1683516/150‑1 (MQ=255) ttGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCgaga < 2:1814438/150‑1 (MQ=255) ttGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCgaga > 1:1245692/1‑150 (MQ=255) gTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCAAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGt < 1:2333377/150‑1 (MQ=255) aCCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCCGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGc < 1:148331/150‑1 (MQ=255) cTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGt > 1:1266681/1‑150 (MQ=255) tGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTc < 1:1915099/150‑1 (MQ=255) cAGCTATCTGGCTAATGCTGTAGCCGCCGGCTGAAAGCAAGGGTCCATCTGCGGGGGGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCAc < 2:1204816/150‑1 (MQ=255) tCTGTATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGc < 1:2379230/97‑1 (MQ=255) tCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGc > 2:2379230/1‑97 (MQ=255) gATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAg < 2:1913677/150‑1 (MQ=255) aTAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCTGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGc < 2:1245692/150‑1 (MQ=255) tAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCga > 1:628868/1‑126 (MQ=255) tAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCga < 2:628868/126‑1 (MQ=255) gCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTc < 1:1465299/120‑1 (MQ=255) gCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTc > 2:1465299/1‑120 (MQ=255) gCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTaa > 2:2421281/1‑150 (MQ=255) tGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGAtttttt < 1:1604636/117‑1 (MQ=255) ggTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGAtttttt > 2:1604636/2‑117 (MQ=255) tCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATAGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAgg > 1:388268/1‑150 (MQ=255) ccGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGt < 2:2237190/150‑1 (MQ=255) ggCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTa > 2:1632770/1‑131 (MQ=255) ggCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTa < 1:1632770/131‑1 (MQ=255) ggCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCt < 1:2631/150‑1 (MQ=255) tGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCGAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGaa > 2:2280639/1‑150 (MQ=255) tGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGaa < 2:1246824/150‑1 (MQ=255) cccgcagTTGAACAACTGCTGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAgg > 2:975010/4‑83 (MQ=38) cccgcagTTGAACAACTGCTGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAgg < 1:975010/80‑1 (MQ=38) cccgcagTTGAACAACTGCTGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCa < 1:1250911/119‑1 (MQ=255) cccgcagTTGAACAACTGCTGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCa > 2:1250911/4‑122 (MQ=255) cccgcagTTGAACAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGAAcc > 1:2356986/4‑150 (MQ=255) cagcagTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACt < 1:833837/123‑1 (MQ=255) cagcagTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACt > 2:833837/1‑123 (MQ=255) cagcagTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAgg < 1:1409223/136‑1 (MQ=255) cagcagTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAgg > 2:1409223/1‑136 (MQ=255) cagcagTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGAACCt > 2:105063/1‑150 (MQ=255) cagcagTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGAACCt > 2:160222/1‑150 (MQ=255) cagcagTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGAACCt > 2:1339118/1‑150 (MQ=255) agcagTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCga > 2:1360055/1‑103 (MQ=255) agcagTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCga < 1:1360055/103‑1 (MQ=255) agTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGAACCTggat < 1:396172/150‑1 (MQ=255) gttCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATAGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGAACCTggatggga < 2:388268/150‑1 (MQ=255) ttCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGTGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGAACCTggatgggat > 2:914499/1‑150 (MQ=255) ttCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGAACCTggatgggat > 1:1878140/1‑150 (MQ=255) ttCAACTGCGGGGAGAAGGTCCGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTCCAGCGTCCTCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAAAAGGCCGGGTCTGAACCTggatgggat < 2:1213577/150‑1 (MQ=255) | GCCTTGTGGCCCGTCGCGGTCACAGTCGGCATAAGCCCAAGCGCAACCTTCCTCCAGCAAATTGCGAAGCTGCGCCATGGCTCGGGGCGCCAGTTTGTCACCTGCAGCGATCTGGATAATGCTGTCGCAGCCGGCTGCCAGCAGTTGTTCAACTGCGGGGAGAAGGTCGGCCGGGGCAGCCTTCGCCAGTTGATGGACACTTTCAGCGTCATCGCCCAGGCTATCGAGGCTGATTTTTTCGAGAGTGGCGTCACCTTCACTTAGCAGTAACAGGCCGGGTCTGAACCTGGATGGGAT > NC_002947/2010355‑2010651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |