BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,150,651	G→C	5.1%	noncoding (291/373 nt)	PP_mr28 ←	rne‑II regulatory region

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,150,651	0	G	C	5.1%	312.6 / 6.8	99	noncoding (291/373 nt)	PP_mr28	rne‑II regulatory region
Reads supporting (aligned to +/- strand): ref base G (48/46); new base C (3/2); total (51/48)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.94e-01

Only 100 of 106 total aligned reads displayed.

GTCCACCAGGGCTACACGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTTGTGCACTCA  >  NC_002947/2150503‑2150800

gTCCACCAGGGCTACACGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCgg                                                                                                                                                      <  2:1300518/150‑1 (MQ=255)

gTCCACCAGGGCTACACGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGACTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCgg                                                                                                                                                      >  1:576613/1‑150 (MQ=255)

    accaGGGCTACACGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCa                                                                                                                                                  >  1:816344/1‑150 (MQ=255)

            tACACGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCCGGCCAccctttgc                                                                                                                                          <  1:1597889/150‑6 (MQ=255)

                cGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTTTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACCCGGCGTTTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGa                                                                                                                                      <  2:327371/150‑1 (MQ=255)

                cGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGa                                                                                                                                      <  2:234550/150‑1 (MQ=255)

                cGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGa                                                                                                                                      >  1:1693215/1‑150 (MQ=255)

                 gCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAg                                                                                                                                     >  1:1653351/1‑150 (MQ=255)

                   aaCTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCATTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCg                                                                                                                                   >  2:1686859/1‑150 (MQ=255)

                     ctctTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGAc                                                                                                                                 <  2:2388082/150‑1 (MQ=255)

                      tctTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACg                                                                                                                                >  2:709662/1‑150 (MQ=255)

                        ttCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGtt                                                                                                                              >  2:480897/1‑150 (MQ=255)

                        ttCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGtt                                                                                                                              >  2:1827602/1‑150 (MQ=255)

                         tCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACNTTc                                                                                                                             <  2:1512929/150‑1 (MQ=255)

                           gggTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCgg                                                                                                                           >  2:2350701/1‑150 (MQ=255)

                           ccgatctgTCGCGTTAATCAGCATTCTCTTAATGATGTTCCGTCGGTTTCCGGGTTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCgg                                                                                                                           <  2:1591875/143‑1 (MQ=255)

                             gTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCa                                                                                                                         >  2:1080677/1‑150 (MQ=255)

                             gTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCa                                                                                                                         <  1:2350701/150‑1 (MQ=255)

                                   tCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTCTCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCagatcgg                                                                                                                   >  1:1591875/1‑144 (MQ=255)

                                      cgTTAGTCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCggg                                                                                                                                                     <  2:994013/113‑1 (MQ=255)

                                      cgTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCggg                                                                                                                                                     >  1:994013/1‑113 (MQ=255)

                                         tAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGc                                                                                                             <  2:1494634/150‑1 (MQ=255)

                                          aaTCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGcc                                                                                                            <  2:1693215/150‑1 (MQ=255)

                                           aTCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGccc                                                                                                           >  2:71990/1‑150 (MQ=255)

                                           aTCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGccc                                                                                                           >  2:467595/1‑150 (MQ=255)

                                            tCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCa                                                                                                          <  1:930468/150‑1 (MQ=255)

                                              aGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTGCGGCACGCACGGCGTCTCCTGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGc                                                                                                        >  2:1270674/1‑150 (MQ=255)

                                              aGCATTCTCTTCATGTTGTACCGTCCGTTTCCGGGCTGCCCGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGc                                                                                                        <  1:154606/150‑1 (MQ=255)

                                                  ttCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGc                                                                                                    >  2:1850042/1‑150 (MQ=255)

                                                   tCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGACCCGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGcc                                                                                                   <  1:1204502/150‑1 (MQ=255)

                                                      tttCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGtt                                                                                                >  2:747122/1‑150 (MQ=255)

                                                         cATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTc                                                                                             <  1:1850042/150‑1 (MQ=255)

                                                         cATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTc                                                                                             <  2:1400080/150‑1 (MQ=255)

                                                             ttgtACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGcga                                                                                         >  1:1590426/1‑150 (MQ=255)

                                                                tACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGcgacga                                                                                      <  2:905574/150‑1 (MQ=255)

                                                                tACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGcgacga                                                                                      >  1:1049312/1‑150 (MQ=255)

                                                                   cGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGAcgc                                                                                   >  2:885609/1‑150 (MQ=255)

                                                                     tCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTCGTCGCGacaacggca                                                                                 <  2:2132101/150‑4 (MQ=255)

                                                                      cGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCAGGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTc                                                                                <  1:2091353/150‑1 (MQ=255)

                                                                        gTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCt                                                                              >  1:78053/1‑150 (MQ=255)

                                                                          ttCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGt                                                                            <  2:1825718/150‑1 (MQ=255)

                                                                          ttCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGt                                                                            <  2:78053/150‑1 (MQ=255)

                                                                           tCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGtt                                                                           <  2:816344/150‑1 (MQ=255)

                                                                                    ccGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGt                                                                  >  2:1137713/1‑150 (MQ=255)

                                                                                     cGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTg                                                                 >  1:599565/1‑150 (MQ=255)

                                                                                     cGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTg                                                                 >  2:2199775/1‑150 (MQ=255)

                                                                                     cGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTg                                                                 >  1:569693/1‑150 (MQ=255)

                                                                                       gAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGcga                                                                                         <  2:977391/124‑1 (MQ=255)

                                                                                       gAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGcga                                                                                         >  1:977391/1‑124 (MQ=255)

                                                                                         aaCGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCgg                                                                                                                                                      <  1:272218/61‑1 (MQ=255)

                                                                                         aaCGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCgg                                                                                                                                                      >  2:272218/1‑61 (MQ=255)

                                                                                         aaCGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCcaa                                                             <  2:1590426/150‑1 (MQ=255)

                                                                                            ggCGTTCGGCACACACGCCGTCTCAGGGGGGGTGCCAACGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCcaacaa                                                          <  2:599565/150‑1 (MQ=255)

                                                                                            ggCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCcaacaa                                                          <  2:556551/150‑1 (MQ=255)

                                                                                            ggCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCcaacaa                                                          <  2:576613/150‑1 (MQ=255)

                                                                                               gTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGc                                                       >  1:798036/1‑150 (MQ=255)

                                                                                                ttCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGt                                                                                                                <  2:1691914/92‑1 (MQ=255)

                                                                                                ttCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGt                                                                                                                >  1:1691914/1‑92 (MQ=255)

                                                                                                ttCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGcc                                                      >  2:862485/1‑150 (MQ=255)

                                                                                                 tCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGccc                                                     <  1:1827602/150‑1 (MQ=255)

                                                                                                    gCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCgg                                                  >  1:732196/1‑150 (MQ=255)

                                                                                                     cacacaCGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGt                                                 <  2:1815353/150‑1 (MQ=255)

                                                                                                      acacacGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTg                                                <  1:480897/150‑1 (MQ=255)

                                                                                                       cacacGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTgg                                               <  2:1587756/150‑1 (MQ=255)

                                                                                                        acacGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGc                                              >  1:1009636/1‑150 (MQ=255)

                                                                                                          acgacgTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCtt                                            >  2:684429/1‑150 (MQ=255)

                                                                                                            gacgTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCg                                          <  2:1009636/150‑1 (MQ=255)

                                                                                                              cgTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGaa                                        <  2:798036/150‑1 (MQ=255)

                                                                                                              cgTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTAGaa                                        <  1:684429/150‑1 (MQ=255)

                                                                                                                tctcATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGAcgc                                                                                   <  1:1288657/105‑1 (MQ=255)

                                                                                                                 ctcATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAACAg                                     <  1:192760/150‑1 (MQ=255)

                                                                                                                  tcATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAgg                                    >  2:691874/1‑150 (MQ=255)

                                                                                                                  tcATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAgg                                    >  1:154211/1‑150 (MQ=255)

                                                                                                                  tcATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGCCGAACGTCGCTCGacacggg                                                                                                                     <  2:2336521/69‑4 (MQ=25)

                                                                                                                    aTGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTa                                  >  2:1079598/1‑150 (MQ=255)

                                                                                                                    aTGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTa                                  >  2:977052/1‑150 (MQ=255)

                                                                                                                      ggTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGcgac                                                                                        >  1:477429/1‑94 (MQ=255)

                                                                                                                      ggTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGcgac                                                                                        <  2:477429/94‑1 (MQ=255)

                                                                                                                      ggTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATc                                <  2:1653351/150‑1 (MQ=255)

                                                                                                                        tCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCAGCCTTCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCg                              <  1:747122/150‑1 (MQ=255)

                                                                                                                        tCGGTGCCAAGGTGCGCAAAGGGGGGCCGGGCCACCCCCGTGTCGAGCGACGTGCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGGATAGGTATCCg                              >  1:295386/1‑150 (MQ=255)

                                                                                                                          gttGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGaa                            <  2:2323304/148‑1 (MQ=255)

                                                                                                                           gTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAAt                           >  2:2156115/1‑150 (MQ=255)

                                                                                                                               cAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTc                                           <  2:1558032/130‑1 (MQ=255)

                                                                                                                               cAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTc                                           >  1:1558032/1‑130 (MQ=255)

                                                                                                                                aaGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAAcc                      <  1:1137713/150‑1 (MQ=255)

                                                                                                                                   gTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGc                                                                <  1:211964/105‑1 (MQ=255)

                                                                                                                                   gTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGc                                                                >  2:211964/1‑105 (MQ=255)

                                                                                                                                   gTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAg                   <  1:1270674/150‑1 (MQ=255)

                                                                                                                                       gcAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCggg               >  2:1806336/1‑150 (MQ=255)

                                                                                                                                         aaaGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGcc             >  2:2023371/1‑150 (MQ=255)

                                                                                                                                           ggggTGGCCCGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCtt           >  2:1260199/2‑150 (MQ=255)

                                                                                                                                            gggTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTtg          >  1:773442/1‑150 (MQ=255)

                                                                                                                                            gggTGGCCCGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTtg          >  2:1018842/1‑150 (MQ=255)

                                                                                                                                             ggTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTtgt         <  1:1093073/150‑1 (MQ=255)

                                                                                                                                             ggTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGCTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTtgt         <  1:71990/150‑1 (MQ=255)

                                                                                                                                             ggTGGCCCGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTc                                           <  2:699562/116‑1 (MQ=255)

                                                                                                                                             ggTGGCCCGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTc                                           >  1:699562/1‑116 (MQ=255)

                                                                                                                                              gTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCCGCCTGTTTGCTGCGGTGCCATCAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTtgtg        <  1:885609/150‑1 (MQ=255)

                                                                                                                                                    gggCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTTGTGCACtca  <  1:1079598/150‑1 (MQ=255)

GTCCACCAGGGCTACACGCAACTCTTCGGGTTGAGTCGCGTTAATCAGCATTCTTTTCATGTTGTACCGTCGGTTTCCGGGCTGCCGGAAACGGCGTTCGGCACACACGACGTCTCATGGTCGGTGCCAAGGTGCGCAAAGGGTGGCCGGGCCACCCCCGTGTCGAGCGACGTTCGGCACCAGCCGGTTGCCCAGCCTGCCGTTGTCGCGACGACGCGTCCTGTTTGCTGCGGTGCCAACAAGGCCCCGGTGGCTTCGAATAGGTATCCGAATCAACCAAGCGGGCCTTGTGCACTCA  >  NC_002947/2150503‑2150800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`