Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,241,886 G→C 6.3% noncoding (35/76 nt) PP_t27 → tRNA‑Ala

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,241,8860GC 6.3% 236.5 / 6.7 79noncoding (35/76 nt)PP_t27tRNA‑Ala
Reads supporting (aligned to +/- strand):  ref base G (39/35);  new base C (3/2);  total (42/37)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01

TAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGT  >  NC_002947/2241737‑2242029
                                                                                                                                                     |                                                                                                                                               
tAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAATCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTgcatgg                                                                                                                                                 >  1:2090028/1‑150 (MQ=255)
  gTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACAGAGGATATGTTGGAATGTCGCTGGGCCGCGAGGCTAGAAATGCGGGGCTATAGCACAGCTGCGAGAGCGCCTgcatgggc                                                                                                                                               >  1:408878/1‑148 (MQ=25)
    ggCCTAGGACCCCGCCCGTGCAGGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTgcatggcatg                                                                                                                                             <  2:2274741/150‑1 (MQ=255)
     gCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGCCNTGc                                                                                                                                            <  2:1502666/150‑1 (MQ=255)
      ccTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCa                                                                                                                                           <  2:1223589/150‑1 (MQ=255)
        tAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCagg                                                                                                                                         >  1:1727159/1‑150 (MQ=255)
          tgttacCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCaggag                                                                                                                                       >  2:1049801/5‑150 (MQ=255)
          ggACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCaggag                                                                                                                                       <  2:1850361/150‑1 (MQ=255)
           gACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTgcatggca                                                                                                                                               <  2:1134147/141‑1 (MQ=255)
           gACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTgcatggca                                                                                                                                               >  1:1134147/1‑141 (MQ=255)
                cGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTgcatggcat                                                                                                                                              <  2:613159/137‑1 (MQ=255)
                cGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTgcatggcat                                                                                                                                              >  1:613159/1‑137 (MQ=255)
                cGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGc                                                                                                                                 >  2:2404963/1‑150 (MQ=255)
                 gCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCg                                                                                                                                <  2:713291/150‑1 (MQ=255)
                   ccTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCag                                                                                                                                          >  1:2288844/1‑138 (MQ=255)
                   ccTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCag                                                                                                                                          <  2:2288844/138‑1 (MQ=255)
                   ccTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGt                                                                                                                              <  2:103365/150‑1 (MQ=255)
                     tttCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTc                                                                                                                            >  2:917168/1‑150 (MQ=255)
                         aCGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATc                                                                                                                        >  1:221673/1‑150 (MQ=255)
                           ggcggTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCGGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATccc                                                                                                                      >  2:865899/1‑150 (MQ=255)
                              ggTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGATTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCt                                                                                                                   >  1:1490636/1‑150 (MQ=255)
                                    aGGGGTTCGAGTCCCCTAGGGGACGCCACTTTTACAGCGGTGTTGTGTGAATGTGAGAGGGCCGCGTGGGGAAAAATCGGGGGCGCTTGGGTAGATGGGGGAGGGCCTGCGTTGCATGCAAAAAGACAGCGGTTCGATCCCGCTTAGCTc                                                                                                             >  2:1051364/1‑150 (MQ=255)
                                       ggTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTccac                                                                                                          <  2:2061675/150‑1 (MQ=255)
                                        cacctaGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTccacc                                                                                                         >  1:1902686/6‑150 (MQ=255)
                                               tCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTg                                                                                                  >  1:366001/1‑150 (MQ=255)
                                                  ccTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGcc                                                                                                <  2:405145/149‑1 (MQ=255)
                                                  ccTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGcc                                                                                                >  1:405145/1‑149 (MQ=255)
                                                  ccTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCcg                                                                                               >  1:2244759/1‑150 (MQ=255)
                                                  ccTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCcg                                                                                               <  2:2244759/150‑1 (MQ=255)
                                                    tAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTgcatggca                                                                                                                                               >  1:932165/1‑100 (MQ=255)
                                                    tAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTgcatggca                                                                                                                                               <  2:932165/100‑1 (MQ=255)
                                                     aGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCgg                                                                                            <  1:346642/150‑1 (MQ=255)
                                                        ggACGCCAGTTTTTAAAAAGCGATGGTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTc                                                                                         >  2:700908/1‑150 (MQ=255)
                                                         gACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTcg                                                                                        >  2:1547545/1‑150 (MQ=255)
                                                            gCCAGTTTTACACCAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGt                                                                                     >  2:1280501/1‑150 (MQ=255)
                                                            gCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTcc                                                                                                            <  2:1329/127‑1 (MQ=255)
                                                            gCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTcc                                                                                                            >  1:1329/1‑127 (MQ=255)
                                                            gCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGt                                                                                     >  1:969685/1‑150 (MQ=255)
                                                              cAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTa                                                                                   >  1:1804796/1‑150 (MQ=255)
                                                                gTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGc                                                                                 <  1:1476557/150‑1 (MQ=255)
                                                                gTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGc                                                                                 <  1:865899/150‑1 (MQ=255)
                                                                     acacAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATc                                                                            >  1:1722717/1‑150 (MQ=255)
                                                                         aaGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCa                                                                        <  1:1049801/150‑1 (MQ=255)
                                                                         aaGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCa                                                                        >  2:2104051/1‑150 (MQ=255)
                                                                          aGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCAc                                                                       <  2:1727159/150‑1 (MQ=255)
                                                                             gATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGaa                                                                    >  1:1032241/1‑150 (MQ=255)
                                                                             gATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGaa                                                                    >  1:80030/1‑150 (MQ=255)
                                                                              atattttTATGTTGCTGGGCCACAACGCTAGAAATCTGAGGCTATACCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGTAGGTCAGCGGTTCGATCCCTCTTAGCCCCACCAATTTTGCCGCGGTTCTCGTTAGCTGATCGGCACGAAg                                                                   <  2:1162140/147‑1 (MQ=18)
                                                                                 ttttAATGTCGCTGGGTCGCAATGCTAGGGAGCCGGGGCTATAGTACAGCTGGGACAGCGCCTGTATGGTATGCAGGGCGCCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGtt                                                                <  2:970437/150‑1 (MQ=21)
                                                                                   ttAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAggagat                                                              >  1:1162140/1‑146 (MQ=255)
                                                                                     aaTGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCAc                                                                       >  1:2221344/1‑139 (MQ=255)
                                                                                     aaTGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCAc                                                                       <  2:2221344/139‑1 (MQ=255)
                                                                                      aTGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTc                                                           >  1:827350/1‑150 (MQ=255)
                                                                                        gTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGGGGTCAGCGGTTCGATCCCGGAAATCTCCACAAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCCCGAAGGTTACGTccc                                                         >  1:25374/1‑150 (MQ=21)
                                                                                          cGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCt                                                       <  1:1280501/150‑1 (MQ=255)
                                                                                            cTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTc                                                     <  1:2104051/150‑1 (MQ=255)
                                                                                            cTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTc                                                     <  2:221673/150‑1 (MQ=255)
                                                                                               ggCCTCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTCGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTc                                                  <  1:730606/150‑1 (MQ=255)
                                                                                               ggCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTc                                                  <  1:1547545/150‑1 (MQ=255)
                                                                                               ggCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTc                                                  <  2:1607574/150‑1 (MQ=255)
                                                                                                 ccGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGATCGATCCCGCGTGGCTGCACGAAGTCTCCTGTGGAGCGCGTTAGCGGAGCGGCACGAATGTTACGTCACCTTCGTCTa                                                >  2:2302020/1‑150 (MQ=18)
                                                                                                   gcgAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGt                                              >  2:765833/1‑150 (MQ=255)
                                                                                                   gcgAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAA‑TTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTg                                             <  1:917168/150‑1 (MQ=255)
                                                                                                        gCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCt                                         >  1:946607/1‑150 (MQ=255)
                                                                                                         cTAGAAATCCGGGGCTATAGTTCAGCTTGGAGAGCGCGTGCATGGCATGCAGGATGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTa                                        >  2:1038391/1‑150 (MQ=255)
                                                                                                          tAGAAATCCGGGGCTATAGCTCAGCTGGGTGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAg                                       <  1:1141156/150‑1 (MQ=255)
                                                                                                                tCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGGGACGTAACCTTCGtgc                                                 >  2:177094/1‑132 (MQ=18)
                                                                                                                  cGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCGGGAGGGCAGCGGTTCGATGCCGATGAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCGCGAAAGTTACGTCTGCGTCGTGTAGTGTCCTAAGACATCGc                               >  2:1307853/1‑150 (MQ=17)
                                                                                                                  cGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGc                               <  1:2351604/150‑1 (MQ=255)
                                                                                                                    gggCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGccc                             >  2:1090973/1‑150 (MQ=255)
                                                                                                                        tataGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTc                         <  1:2404963/150‑1 (MQ=255)
                                                                                                                            gCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCAcgg                     <  1:807254/150‑1 (MQ=255)
                                                                                                                                     ggAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACa             <  2:1569884/149‑1 (MQ=255)
                                                                                                                                     ggAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACa             >  1:1569884/1‑149 (MQ=255)
                                                                                                                                      gagaGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCAGCAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAgg           >  1:1307291/1‑150 (MQ=255)
                                                                                                                                         agCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGt        >  1:1391328/1‑150 (MQ=255)
                                                                                                                                          cctccTGCATGCCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGtt       >  2:417312/4‑150 (MQ=255)
                                                                                                                                            tccTGCATGCCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTAc                                                              <  1:1017280/92‑1 (MQ=255)
                                                                                                                                            tccTGCATGCCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTAc                                                              >  2:1017280/2‑93 (MQ=255)
                                                                                                                                            tccTGAATGCCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCg     >  1:1401341/2‑150 (MQ=255)
                                                                                                                                             ccTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTTGTGGCGTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGa    <  2:1902686/150‑1 (MQ=255)
                                                                                                                                             ccTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGa    <  1:700908/150‑1 (MQ=255)
                                                                                                                                             ccTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTGTGCCGCGGGTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGATAACAAAGGTGCGa    <  2:1032241/150‑1 (MQ=17)
                                                                                                                                              cTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTa                                                                                   >  2:39640/1‑70 (MQ=255)
                                                                                                                                              cTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTa                                                                                   <  1:39640/70‑1 (MQ=255)
                                                                                                                                              cTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAg   >  1:1219803/1‑150 (MQ=255)
                                                                                                                                              cTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGAACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAg   <  1:765833/150‑1 (MQ=255)
                                                                                                                                               tGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGt  <  2:827350/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                               
TAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACACAAGCGATGTTTTAATGTCGCTGGGCCGCGAGGCTAGAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAGCGGTTCGATCCCGCTTAGCTCCACCAATTTTGCCGCGGTTCGCGTTAGCGGATCGGCACGAAGGTTACGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGT  >  NC_002947/2241737‑2242029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑