| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,284,839 | T→C | 7.9% | C17R (TGT→CGT) | PP_2013 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,284,839 | 0 | T | C | 7.9% | 288.9 / 10.9 | 101 | C17R (TGT→CGT) | PP_2013 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (46/47); new base C (4/4); total (50/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.06e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
GCAAAAGCTGCGCCTGATCCACCCGCTGGACCACAATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCTGCACATCGTCCACGA > NC_002947/2284692‑2284987 | gCAAAAGCTGCGCCTGATCCACCCGCTGGACCACAATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCtgt > 2:588511/1‑150 (MQ=255) cAAAAGCTGCGCCTGATCCACCCGCTGGACCACAATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCtgtg > 1:1350551/1‑150 (MQ=255) cTGCGCCTGATCCACCCGCTGGACCACAATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACAGCCGTGCAcgtc < 1:1928867/150‑4 (MQ=255) ccTGATCCACCCGCTGGACCACAATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCtt < 1:1997477/150‑1 (MQ=255) ccACCCGCTGGACCACAATTACTGCGAGGTCGGCCGGACCGGACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTGTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGc < 2:1740342/150‑1 (MQ=255) gACCACAATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACg > 2:729071/1‑150 (MQ=255) gACCACAATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACg > 2:388023/1‑150 (MQ=255) aCCACAATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGc < 2:1346615/150‑1 (MQ=255) cacaATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGccc > 2:1146059/1‑150 (MQ=255) cacaATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACAGCCGTGCAc > 1:634739/1‑123 (MQ=255) cacaATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACAGCCGTGCAc < 2:634739/123‑1 (MQ=255) acaATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCt > 2:2111142/1‑150 (MQ=255) ctacGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATAc > 2:565311/1‑150 (MQ=255) tacGAGGTCTGCCGCACCAAACTGGGATGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACa > 1:1025083/1‑150 (MQ=255) gAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAgc > 1:607871/1‑150 (MQ=255) gTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGCCGCACTCGGATAAAAGctcg > 2:1092975/1‑150 (MQ=255) tCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGt > 1:1575318/1‑150 (MQ=255) tGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTgg > 1:1257098/1‑150 (MQ=255) cGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCg < 2:187175/150‑1 (MQ=255) gCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCgg < 2:427951/150‑1 (MQ=255) gCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCgg > 2:1149142/1‑150 (MQ=255) cACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGc < 1:1683402/150‑1 (MQ=255) cACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGc > 2:717246/1‑150 (MQ=255) aCCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCg > 2:1903224/1‑150 (MQ=255) cAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCgtg > 2:761903/1‑150 (MQ=255) aaaCTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCgtgt < 2:607871/150‑1 (MQ=255) aaaCTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCgtgt < 2:442235/150‑1 (MQ=255) aaaCTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCgtgt > 1:1099701/1‑150 (MQ=255) aaCTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGtgtg > 1:777201/1‑150 (MQ=255) tGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGgcg < 2:2085264/150‑1 (MQ=255) gggTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTACTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGgcgc < 1:1173370/150‑1 (MQ=255) ggTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGAc > 2:2449937/1‑113 (MQ=255) ggTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGcc > 1:1504128/1‑150 (MQ=255) gTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCa > 1:180775/1‑150 (MQ=255) ttGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCAc > 1:2092069/1‑150 (MQ=255) ttGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGAACCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCAc > 1:1209224/1‑150 (MQ=255) gggCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCcg < 1:934640/150‑1 (MQ=255) cAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGa < 1:1350216/150‑1 (MQ=255) cgccTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACggc > 2:681046/1‑148 (MQ=255) gccTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCa > 1:2232478/1‑150 (MQ=255) cTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAgg < 1:342863/150‑1 (MQ=255) ggggAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCgt < 2:2115975/125‑1 (MQ=255) ggggAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCgt > 1:2115975/1‑125 (MQ=255) gCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGCCGCCCTCGGATCCAAGCGCGTGGCCGGCGTGTGGCGCCCCCCGCGCCGTCAGGCGCTGtc > 1:92312/1‑149 (MQ=255) cAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTc < 1:1149142/150‑1 (MQ=255) gTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCt < 2:841732/150‑1 (MQ=255) gTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCt > 1:509904/1‑150 (MQ=255) gTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGAGGGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCt < 1:565311/150‑1 (MQ=255) tGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCtt < 1:815936/150‑1 (MQ=255) acgacTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCCCGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGCTACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTATTCCTTgg < 2:1257098/150‑1 (MQ=255) acgacTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTgg < 1:2352464/150‑1 (MQ=255) acgacTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTgg > 2:617825/1‑150 (MQ=255) acTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGTACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGcc > 2:1133857/1‑119 (MQ=255) acTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGTACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGcc < 1:1133857/119‑1 (MQ=255) aTGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATAtc > 1:974656/1‑150 (MQ=255) tGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCtgtg < 1:1891045/51‑1 (MQ=255) tGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCtgtg > 2:1891045/1‑51 (MQ=255) cTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCa > 1:210686/1‑113 (MQ=255) cTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCa < 2:210686/113‑1 (MQ=255) cTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATAtcgtc > 2:152243/1‑150 (MQ=255) cTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATAtcgtc < 1:617825/150‑1 (MQ=255) cTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATAtcgtc < 2:1025083/150‑1 (MQ=255) cTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCACTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCAACCCGCGACGTCAGGCGCTGTTCCTTGGCGATAtcgtc < 2:1089331/150‑1 (MQ=255) cGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGc > 2:754268/1‑134 (MQ=255) cGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGc < 1:754268/134‑1 (MQ=255) cGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACcgcg < 1:1374655/150‑1 (MQ=255) cgcgAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTCGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACcgcgatc < 1:82901/150‑4 (MQ=255) aaGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAgc < 2:1005643/77‑1 (MQ=255) aaGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAgc > 1:1005643/1‑77 (MQ=255) ttttGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCAt > 1:1865558/1‑150 (MQ=255) gtttGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTGCCTTGGCGATAGCGTCGACCGCGGGCCACGCAt > 1:2179689/2‑150 (MQ=255) gACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTcgc < 2:180775/150‑1 (MQ=255) aCATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTTGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTcgcg > 1:1859881/1‑150 (MQ=255) catcatCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGa < 1:152243/150‑1 (MQ=255) catcatCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGa < 1:2111142/150‑1 (MQ=255) atcatcGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAg < 1:136914/150‑1 (MQ=255) atcatcGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAg > 2:136914/1‑150 (MQ=255) tcatcGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGc < 2:1515853/116‑1 (MQ=255) tcatcGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGc > 1:1515853/1‑116 (MQ=255) cGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGNGCt < 2:1504128/150‑1 (MQ=255) cGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCt < 1:588511/150‑1 (MQ=255) cGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCt < 2:2232478/150‑1 (MQ=255) ggCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCTg < 2:1865558/150‑1 (MQ=255) gCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCTGc < 1:673015/150‑1 (MQ=255) gtcagTGCACAGCCGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGa > 2:1868988/5‑141 (MQ=255) gtcagTGCACAGCCGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGa < 1:1868988/137‑1 (MQ=255) gtcagTGCACAGCCGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGa < 1:1869268/137‑1 (MQ=255) gtcagTGCACAGCCGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGa > 2:1869268/5‑141 (MQ=255) tcagTGCACAGCCGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCTGcac > 1:538583/4‑150 (MQ=255) gTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCTGCACATc < 2:1641174/150‑1 (MQ=255) gTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCTGCACATc < 1:717246/150‑1 (MQ=255) tGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTg < 1:1555196/95‑1 (MQ=255) tGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTg > 2:1555196/1‑95 (MQ=255) gCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCTGCACATCGt > 2:2204894/1‑150 (MQ=255) cACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTgg > 2:385590/1‑58 (MQ=255) cACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTgg < 1:385590/58‑1 (MQ=255) cACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAg > 2:2220819/1‑135 (MQ=255) cACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAg < 1:2220819/135‑1 (MQ=255) cACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCTGCACATCGTc > 1:450079/1‑150 (MQ=255) ggCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGCTATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCTGCACATCGTCCAc < 2:1728457/150‑1 (MQ=255) | GCAAAAGCTGCGCCTGATCCACCCGCTGGACCACAATTACTACGAGGTCTGCCGCACCAAACTGGGTTGGGGCAGCCGCCTGGGGAGCAGTGACGACTGATGCTCGATCCGGCGCGAAGTTTTGACATCATCGGCGACGTGCACGGCTGTGCACTGACCCTTGAACGCCTGCTCGACGCCCTCGGATACAAGCGCGTGGCCGGCGTGTGGCGCCACCCGCGACGTCAGGCGCTGTTCCTTGGCGATATCGTCGACCGCGGGCCACGCATTCGCGAGGCGCTGCACATCGTCCACGA > NC_002947/2284692‑2284987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |