BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,320,148	T→C	5.5%	V373A (GTC→GCC) ‡	PP_2040 →	MFS transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,320,148	0	T	C	5.5%	309.6 / 5.1	110	V373A (GTC→GCC) ‡	PP_2040	MFS transporter
Reads supporting (aligned to +/- strand): ref base T (46/57); new base C (3/3); total (50/60)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.63e-01

Only 100 of 114 total aligned reads displayed.

CCTCACGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCGGCAACGTCTGGTGCAG  >  NC_002947/2320002‑2320296

ccTCACGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCAc                                                                                                                                                    >  1:1376426/1‑150 (MQ=255)

ccTCACGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCAc                                                                                                                                                    >  1:1709119/1‑150 (MQ=255)

ccTCACGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGCCGGCATTTTGGCGATCGGCAACGGTATCGCCTCGTTGGTCGAGCTGACGGCACCGGTGGTCAc                                                                                                                                                    >  2:1215185/1‑150 (MQ=255)

 cTCACGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCAcc                                                                                                                                                   >  2:885152/1‑150 (MQ=255)

    aCGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGt                                                                                                                                                >  2:586762/1‑150 (MQ=255)

     cgtgcggCGGTGGGATGGCGCTGGTGATGTACTCCGGGGGGCCGGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGtt                                                                                                                                               <  2:275830/144‑1 (MQ=255)

        tCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCATGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGc                                                                                                                                            >  2:1440149/1‑150 (MQ=255)

          ggCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTg                                                                                                                                          <  1:1755322/149‑1 (MQ=255)

                gggCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCTGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAg                                                                                                                                   <  1:2440660/150‑1 (MQ=255)

                  gCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCTCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAggg                                                                                                                                 >  2:426229/1‑150 (MQ=255)

                      gcgcTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACCCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCgcc                                                                                                                             >  2:1786012/1‑150 (MQ=255)

                        gcTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGGCGGGCTGTCGGCACCGGTGGGCACCGGTTTGCTGGTG‑CAGGGCgccgg                                                                                                                           >  2:953496/1‑150 (MQ=255)

                            gTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCgccggggcc                                                                                                                       >  2:1426085/1‑150 (MQ=255)

                            gTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCgccggggcc                                                                                                                       <  1:1480966/150‑1 (MQ=255)

                                  tACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGcac                                                                                                                 >  1:920229/1‑150 (MQ=255)

                                  tACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGcac                                                                                                                 >  1:1510471/1‑150 (MQ=255)

                                  tACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGcac                                                                                                                 >  1:1686408/1‑150 (MQ=255)

                                    cTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCgccgtgg                                                                                                                         <  1:2117562/140‑1 (MQ=255)

                                    cTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCgccgtgg                                                                                                                         >  2:2117562/1‑137 (MQ=255)

                                    cTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCacac                                                                                                               >  2:1057754/1‑150 (MQ=255)

                                     tCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCgccggggccgg                                                                                                                     <  1:406661/143‑1 (MQ=255)

                                     tCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACg                                                                                                              <  1:1595976/150‑1 (MQ=255)

                                     tCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACg                                                                                                              >  1:1546054/1‑150 (MQ=255)

                                     tCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACg                                                                                                              >  1:784564/1‑150 (MQ=255)

                                      ccGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACgg                                                                                                             <  1:1057754/150‑1 (MQ=255)

                                         ttgggCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAg                                                                                                          <  1:2396848/148‑1 (MQ=255)

                                         tGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAg                                                                                                          <  1:1975527/150‑1 (MQ=255)

                                         tGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAg                                                                                                          <  1:298830/150‑1 (MQ=255)

                                             gCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGtt                                                                                                      <  2:2313945/150‑1 (MQ=255)

                                               cTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTg                                                                                                    <  2:540353/150‑1 (MQ=255)

                                                  ccATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGcc                                                                                                 >  1:1434561/1‑150 (MQ=255)

                                                    aTGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAg                                                                                               <  1:1426085/150‑1 (MQ=255)

                                                     tGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAgg                                                                                              <  1:1292201/150‑1 (MQ=255)

                                                     tGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAgg                                                                                              >  1:1895680/1‑150 (MQ=255)

                                                          gCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGtttt                                                                                         >  1:1661474/1‑150 (MQ=255)

                                                          gCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGtttt                                                                                         >  2:782918/1‑150 (MQ=255)

                                                               gTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGgt                                                                                    >  2:826683/1‑150 (MQ=255)

                                                                ttCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGgtg                                                                                   <  2:1941362/150‑1 (MQ=255)

                                                                   aCGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTgc                                                                                >  2:2238971/1‑150 (MQ=255)

                                                                    cGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGtgtg                                                                                 <  2:2304909/148‑1 (MQ=255)

                                                                    cGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGtgtg                                                                                 >  1:2304909/1‑148 (MQ=255)

                                                                     gCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCCCCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTgcgg                                                                              >  2:1038097/1‑150 (MQ=255)

                                                                     gCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTgcgg                                                                              >  2:2428172/1‑150 (MQ=255)

                                                                     gCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTgcgg                                                                              >  1:2209398/1‑150 (MQ=255)

                                                                     gCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTgcgg                                                                              >  2:2073354/1‑150 (MQ=255)

                                                                         aGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGcgcg                                                                          >  2:1110074/1‑150 (MQ=255)

                                                                            gggCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTg                                                                       <  1:1110074/150‑1 (MQ=255)

                                                                              gCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCt                                                                     <  2:2047275/150‑1 (MQ=255)

                                                                              gCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCt                                                                     >  1:1874522/1‑150 (MQ=255)

                                                                               cAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTg                                                                    <  1:510217/150‑1 (MQ=255)

                                                                                aGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGt                                                                                                       >  2:1632233/1‑114 (MQ=255)

                                                                                aGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGt                                                                                                       <  1:1632233/114‑1 (MQ=255)

                                                                                aGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTCTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTgg                                                                   <  1:1968824/150‑1 (MQ=255)

                                                                                   gcggcgGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCCCAGGTATGC‑GCTGTCAGGGCGGCGGGGGCGGGTGGACGGGTCGCTTTGGCCAGGGTTTTTTGGTGTGCGGCGCGGTGCTGGTGa                                                                <  2:1464929/150‑1 (MQ=255)

                                                                                   gcggcgGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCCGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGa                                                                <  1:1992108/150‑1 (MQ=255)

                                                                                   gcggcgGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACAGGTGGTCCCCGGTTTCCTGGTG‑TCTGCTGCTGAGTATTGTGATTCTTCTTTTTGTGTCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGa                                                                <  2:1465370/150‑1 (MQ=255)

                                                                                     ggcggcATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTNAtt                                                              <  2:1510471/150‑1 (MQ=255)

                                                                                         gcATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCg                                                          >  1:522112/1‑150 (MQ=255)

                                                                                         gcATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCg                                                          <  2:784564/150‑1 (MQ=255)

                                                                                           aTTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCggg                                                        <  2:1551025/150‑1 (MQ=255)

                                                                                            ttCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGc                                                       >  2:317188/1‑150 (MQ=255)

                                                                                                ggCGATCGGCAACGGTATCTCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGAt                                                   <  1:426229/150‑1 (MQ=255)

                                                                                                 gCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCCGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATc                                                  <  1:885152/150‑1 (MQ=255)

                                                                                                    aTCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCggg                                               <  1:317188/150‑1 (MQ=255)

                                                                                                       ggCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACTCGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTg                                            <  2:1376426/150‑1 (MQ=255)

                                                                                                          aaCGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGgt                                                                                    <  1:1507429/107‑1 (MQ=255)

                                                                                                          aaCGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGgt                                                                                    >  2:1507429/1‑107 (MQ=255)

                                                                                                            cGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCtg                                       <  1:333798/150‑1 (MQ=255)

                                                                                                              gTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCtgga                                     >  1:2420025/1‑150 (MQ=255)

                                                                                                              gTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCtgga                                     <  2:2368750/150‑1 (MQ=255)

                                                                                                                aTCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCTGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCtggatg                                   <  2:2318050/150‑1 (MQ=255)

                                                                                                                 tggCCGCGCTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCtggatgg                                  <  2:2345161/148‑1 (MQ=255)

                                                                                                                 tCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCtggatgg                                  >  1:1277368/1‑150 (MQ=255)

                                                                                                                 tCGCCTCGTTGGCCGGGCTGGCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTCTGGCCCGGGTTTTGGTGTGTGCGGCGCGGTGCTGGTGAATGCCGGGCTGATCCGGCTGCCCtggatcg                                  >  2:46311/1‑148 (MQ=255)

                                                                                                                   gCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGTTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCtgga                                     <  1:319895/145‑1 (MQ=255)

                                                                                                                   gCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGTTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCtgga                                     >  2:319895/1‑145 (MQ=255)

                                                                                                                   gCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGAc                                <  1:782918/150‑1 (MQ=255)

                                                                                                                    ccTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGAcc                               >  2:1837424/1‑150 (MQ=255)

                                                                                                                     cTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCt                                             <  1:215244/135‑1 (MQ=255)

                                                                                                                     cTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCt                                             >  2:215244/1‑135 (MQ=255)

                                                                                                                           ggCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGaa                        <  1:1837424/150‑1 (MQ=255)

                                                                                                                              cGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGGTTGGCCAGGGGTTTCTGGTGGGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAAc                     >  2:1467271/1‑150 (MQ=255)

                                                                                                                                 gCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCg                  <  2:42298/150‑1 (MQ=255)

                                                                                                                                 gCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCg                  <  1:605033/150‑1 (MQ=255)

                                                                                                                                 gCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCg                  <  1:953496/150‑1 (MQ=255)

                                                                                                                                 gCTGTCGGCACCGGTGGTCACCGGTTTGCTCGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCg                  <  1:604737/150‑1 (MQ=255)

                                                                                                                                  cggTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCgg                 <  2:420658/148‑1 (MQ=255)

                                                                                                                                  cTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCt                                                      >  2:1928493/1‑113 (MQ=255)

                                                                                                                                  cTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCtgga                                     >  2:693735/1‑130 (MQ=255)

                                                                                                                                  cTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCtgga                                     <  1:693735/130‑1 (MQ=255)

                                                                                                                                  cTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCgg                 <  1:826683/150‑1 (MQ=255)

                                                                                                                                    cagcaaaCCGGTGACCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCGGCa               >  1:1846357/7‑150 (MQ=255)

                                                                                                                                     agcaaaCCGGTGACCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCGGCaa              <  2:1846357/145‑1 (MQ=255)

                                                                                                                                         aaCCGGTGACCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGa                         <  1:1012887/134‑1 (MQ=255)

                                                                                                                                         aaCCGGTGACCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGa                         >  2:1012887/2‑135 (MQ=255)

                                                                                                                                          aCCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGCGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTTGATGGACCCGCAGAAAACCCGGCAACGTCt         <  1:314682/150‑1 (MQ=255)

                                                                                                                                              gtggtCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCGGCAACGTCTGGTg     >  2:779004/1‑150 (MQ=255)

                                                                                                                                              gtggtCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCGGCAACGTCTGGTg     >  2:946790/1‑150 (MQ=255)

                                                                                                                                              gtggtCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCGGCAACGTCTGGTg     <  2:1895680/150‑1 (MQ=255)

                                                                                                                                                 gtCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGGCAGGGATTTCTGGTGTGCGGCGCGGCGCAGGTGATTGCCGGGCTGATCGGGCTGGCATGGACGGACCCCCAGAAAACCCGGCAACGGCTGGTggtg  >  2:1722839/1‑147 (MQ=255)

CCTCACGTTCAGCGGTGGGCTGGCGCTGGTGATGTACTCCGTGGGGCCTGCCATGCTGGCGGAGTTCACGCCCAGCGGGCAGCGCGGCGGCATTCTGGCGATCGGCAACGGTATCGCCTCGTTGGCCGGGCTGTCGGCACCGGTGGTCACCGGTTTGCTGGTG‑CAGGGCGCCGGGGCCGGGCACACGGCAGGGTTTGGCCAGGGTTTTCTGGTGTGCGGCGCGGTGCTGGTGATTGCCGGGCTGATCGGGCTGGCCTGGATGGACCCGCAGAAAACCCGGCAACGTCTGGTGCAG  >  NC_002947/2320002‑2320296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`