| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,603,124 | G→T | 5.6% | W13L (TGG→TTG) | PP_5513 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,603,124 | 0 | G | T | 5.6% | 338.0 / 3.5 | 105 | W13L (TGG→TTG) | PP_5513 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (50/49); new base T (3/3); total (53/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
GAGCGATAAGCGCTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGTCCGTTCTGGTCACTGATT > NC_002947/2602981‑2603272 | gAGCGATAAGCGCTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGtggatgga < 1:206647/150‑1 (MQ=255) aGCGATAAGCGCTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATggag < 2:901484/150‑1 (MQ=255) aGCGATAAGCGCTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATggag < 2:1559966/150‑1 (MQ=255) cGATTAGCGCTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCGGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCCACTTGATggagaa < 1:248132/150‑3 (MQ=255) gATAAGCGCTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGATGAACACTT‑CTCCATCAAGTGGATGGAGGaa < 2:1405249/150‑1 (MQ=255) tAAGCGCTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGt < 2:198611/150‑1 (MQ=255) gcgcTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGGCGCCTGGCCTCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCCACTTGATGGA‑GAAGTgttc < 2:682787/150‑4 (MQ=255) cgcTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGAt < 2:942637/150‑1 (MQ=255) cgcTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGAt < 2:1653919/150‑1 (MQ=255) gTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGact > 2:1353027/1‑150 (MQ=255) ccGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTgg > 1:1707408/1‑150 (MQ=255) ccGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTgg > 1:1063112/1‑150 (MQ=255) cGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTggg < 1:1676969/150‑1 (MQ=255) cccGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGt > 2:1930358/1‑127 (MQ=255) cccGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGt < 1:1930358/127‑1 (MQ=255) cGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTc < 1:97157/150‑1 (MQ=255) gAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGa < 2:403117/118‑1 (MQ=255) gAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGa < 2:410903/118‑1 (MQ=255) gAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGa > 1:410903/1‑118 (MQ=255) gAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGa > 1:403117/1‑118 (MQ=255) gTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGc < 1:1053134/150‑1 (MQ=255) cAGGCTAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCCCCTATCCTCTAc > 2:1996119/1‑150 (MQ=255) cAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTAc > 2:1473004/1‑150 (MQ=255) aGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGc < 2:1063894/116‑1 (MQ=255) aGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGc > 1:1063894/1‑116 (MQ=255) aGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACCCATGGCAGCAATACGGAACAGAACAATAAGGGGCTGGTTTTACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACt > 1:45912/1‑150 (MQ=255) gCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGa > 2:381402/1‑119 (MQ=255) gCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGa < 1:381402/119‑1 (MQ=255) ccAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGa < 2:1756731/150‑1 (MQ=255) cAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGAt < 1:1353027/150‑1 (MQ=255) cAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGAt > 1:2352427/1‑150 (MQ=255) aaGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATc > 1:1189903/1‑150 (MQ=255) ctccGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTccc > 2:2046079/1‑150 (MQ=255) ctccGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTccc > 2:2271216/1‑150 (MQ=255) tccGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTTACCGACGAACACTT‑CTCCATCAAGCGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGCTCGGTCCCg > 1:214460/1‑150 (MQ=255) tccGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCg > 1:2449863/1‑150 (MQ=255) gTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGc < 2:2405596/115‑1 (MQ=255) gTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGc > 1:2405596/1‑115 (MQ=255) ttCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAgg < 1:388719/150‑1 (MQ=255) tCCAACGTCTTCTGACACCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAggg > 2:1223780/1‑150 (MQ=255) ccAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGa > 2:65221/1‑150 (MQ=255) ccAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGa < 2:1707408/150‑1 (MQ=255) cAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAg > 1:1583137/1‑146 (MQ=255) cAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAg < 2:1583137/146‑1 (MQ=255) aaCGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACt > 2:1013724/1‑150 (MQ=255) gTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGc < 2:1568442/150‑1 (MQ=255) ttctGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCgg > 2:778932/1‑150 (MQ=255) ttctGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCgg > 2:1816166/1‑150 (MQ=255) tctGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTTCCTCCATCCACTTGATGGA‑GAAGTgttc > 1:106095/1‑83 (MQ=21) tctGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTTCCTCCATCCACTTGATGGA‑GAAGTgttc < 2:106095/86‑4 (MQ=21) aCGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGt < 1:65221/150‑1 (MQ=255) cGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTg < 1:475980/150‑1 (MQ=255) gcgtGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGAGGATAGTGAGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTCCGTgg > 1:283260/4‑150 (MQ=255) gCCTGGCCGCAATAAGGAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTAc > 1:254642/1‑116 (MQ=255) cTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGCCCACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCCTATTCGCGTATCCGCTACTGGATCGCTCCGGAAGGTACTGGCCGGTACGTGGAt < 1:1996119/150‑1 (MQ=255) tGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATg > 1:1805071/1‑150 (MQ=255) ccGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCt < 2:329265/95‑1 (MQ=255) ccGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCt > 1:329265/1‑95 (MQ=255) ccGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTcc < 1:914131/150‑1 (MQ=255) cGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGAt > 2:806908/1‑73 (MQ=255) cGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGAt < 1:806908/73‑1 (MQ=255) cGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTccc > 2:7638/1‑150 (MQ=255) gCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTcccc > 1:1852045/1‑150 (MQ=255) aaTAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGt > 2:1140301/1‑138 (MQ=255) aaTAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGt < 1:1140301/138‑1 (MQ=255) tAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTg > 2:2302121/1‑150 (MQ=255) aGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGAGAATGTAGGAAGTGGAAGGCGTGCACTACGTGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCGGAAGAGACTGACCGCTACGTGTATGTCCCCGCTgcc > 2:742289/1‑148 (MQ=255) gAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCt > 2:2202922/1‑150 (MQ=255) gAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCt > 1:1274919/1‑150 (MQ=255) aaTGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGa > 1:2367070/1‑150 (MQ=255) aaTGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGa < 1:2271216/150‑1 (MQ=255) aaTGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGa < 1:1814523/150‑1 (MQ=255) aTGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGAt < 1:2302121/150‑1 (MQ=255) aTGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGAt < 1:2046079/150‑1 (MQ=255) gCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAg < 1:945544/102‑1 (MQ=255) gctgcACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGAt < 2:1341065/115‑1 (MQ=255) gCTGCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGAt > 1:1341065/1‑119 (MQ=255) cTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTc < 1:1816166/150‑1 (MQ=255) cTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTc < 1:1013724/150‑1 (MQ=255) cACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGTCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGt < 1:1535206/150‑1 (MQ=255) cgacgaACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTAcc < 1:1421667/150‑1 (MQ=255) acgaACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACt > 2:713228/1‑131 (MQ=255) acgaACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACt < 1:713228/131‑1 (MQ=255) aaCACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGAATACCGGGCTCCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCccgtc < 2:2276054/150‑1 (MQ=255) acacTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTAc < 2:2183766/70‑1 (MQ=255) acTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTAc < 2:1257037/68‑1 (MQ=255) acTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTAc > 1:1257037/1‑68 (MQ=255) acTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTg > 2:65624/1‑101 (MQ=255) acTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTg < 1:65624/101‑1 (MQ=255) acTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCccgt < 2:1915876/146‑1 (MQ=255) acTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCccgt > 1:1915876/1‑146 (MQ=255) ttcctcCATCCACTTGATGGA‑GAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGTCCGTTc > 1:432154/4‑150 (MQ=255) tt‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGTCCGTTc > 2:2375982/1‑150 (MQ=255) ctcCATCCACTTGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGTCCGTTCTg > 1:765674/1‑150 (MQ=255) ctcCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGTCCGTTCTg < 1:1473004/150‑1 (MQ=255) ctcCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGCCCGTTCTg < 2:1852045/150‑1 (MQ=255) aTCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGTCCGTTCTGGTCa > 2:1586633/1‑150 (MQ=255) aaGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGTCCGTTCTGGTCACTg < 1:2375982/150‑1 (MQ=255) gTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGTCCGTTCTGGTCACTGAt > 1:2119299/1‑150 (MQ=255) tggatggaGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGTCCGTTCTGGTCACTGAtt < 1:1171366/150‑1 (MQ=255) | GAGCGATAAGCGCTACCGCAGTGACCCGGCATACCGTGCCCGAGTCCAGGCCAAGCTCCTCCGTTCCAACGTCTTCTGACGCCTGGCCGCAATAAGAAAAACAACAATGAGCGGCTTCACCGACGAACACTT‑CTCCATCAAGTGGATGGAGGAAGTGGATGGCGTGGACTACTGGGCATCTTCGCCTTTCCGCTACTGGATCGGTCCCGAAGGGACTGGCCGGTACGTGGATGTCCCCGCTGGCTTCATCACTGATGGAGCTTCTGTACCCCGTCCGTTCTGGTCACTGATT > NC_002947/2602981‑2603272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |