Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 2,633,500 | T→G | 16.4% | intergenic (+100/‑82) | hupB → / → PP_2304 | DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 2,633,500 | 0 | T | G | 16.4% | 156.1 / 26.9 | 73 | intergenic (+100/‑82) | hupB/PP_2304 | DNA binding regulator subunit beta B/peptidyl‑prolyl cis‑trans isomerase D |
Reads supporting (aligned to +/- strand): ref base T (33/28); new base G (5/7); total (38/35) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.33e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 |
GTTCCAGGTTTCAAGGCCGGCAAAGGCCTGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGCCTTATCGTCGT > NC_002947/2633353‑2633649 | gTTCCAGGTTTCAAGGCCGGCAAAGGCCTGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCg < 2:29146/150‑1 (MQ=255) aGGTTTCAAGGCCGGCAAAGGCCTGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATgc > 2:1615196/1‑150 (MQ=255) ttttCAAGGCCGGCAAAGGCCTCAAAGATGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCGAGGATgcgc < 1:318622/149‑1 (MQ=255) gTTTCAAGGCCGGCAAAGGCCTGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCGAGGATgcgc < 1:164547/150‑1 (MQ=255) aGGCCGGCAAAGGCCTGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑ctttct > 2:2066470/1‑150 (MQ=255) aGGCCGGCAAAGGCCTGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCGAGGATGCGC‑ct < 1:106143/146‑1 (MQ=255) aGGCCGGCAAAGGCCTGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCGAGGATGCGC‑ct > 2:106143/1‑146 (MQ=255) ccGGCAAAGGCCTGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCtttt > 2:1624815/1‑150 (MQ=255) aGGCCTGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGa < 1:623374/150‑1 (MQ=255) tGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTa > 2:332221/1‑150 (MQ=255) tGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTa > 2:774061/1‑150 (MQ=255) aaGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTAccc > 1:2001835/1‑150 (MQ=255) aGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCa < 1:774061/150‑1 (MQ=255) gCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATgc < 2:1536299/119‑1 (MQ=255) gCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATgc > 1:1536299/1‑119 (MQ=255) gCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCt > 1:659378/1‑150 (MQ=255) cGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGGCACGTTTGCTAAGCAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTcc > 2:1302362/1‑150 (MQ=255) cAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAACACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCcgcg < 1:1619637/150‑1 (MQ=255) cTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGTATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGtt > 1:738333/1‑150 (MQ=255) cTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGtt < 1:1893660/150‑1 (MQ=255) cTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGtt > 2:572015/1‑150 (MQ=255) tcgtcTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGa < 1:332221/150‑1 (MQ=255) gtcTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACg > 1:1370354/1‑150 (MQ=255) tCAGCCGGGCCCGGACTGGCCTGGTCTGAGCACGGTGCTGCCGGGGCGCAAACGTTCCCGCATGACACGTTTGCTAAGAACAGGAGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTg < 1:493029/150‑1 (MQ=255) aGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGt < 1:1132094/150‑1 (MQ=255) ggACCAGGCCAGGCCGGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAg > 1:566920/1‑150 (MQ=255) cGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGa < 2:2163781/106‑1 (MQ=255) cGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGa > 1:2163781/1‑106 (MQ=255) gatctggTCCGAGCACTGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGATT‑ATAACCCTTTCCTCAAACCGCTGATGCGC‑CTTGCTAATATAAGGATTCTTCCCAGGATCAGCGGGGGTCGTCGCAGTGGTACAGCCGTTTCTggg < 1:2388924/147‑1 (MQ=255) gcctggTCCGAGCACGGTGATGGCTGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTgggg > 2:1621214/1‑150 (MQ=255) tggTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGAc < 2:2181219/150‑1 (MQ=255) tggTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGAc < 2:311079/150‑1 (MQ=255) gTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCATGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGc > 1:2107614/1‑150 (MQ=255) gTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTggggagata > 2:2388924/1‑145 (MQ=255) cGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCAtg < 1:2066470/150‑1 (MQ=255) gAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCAtgc > 1:1085822/1‑150 (MQ=255) cACGGTGATGGCGGGGCGCAAACGTTCCCGCGTGACACGTTTGCTAAGAAAAGGCGC‑CTACTCGAAAG‑GCGAAGGCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCAtgctgc < 1:1615196/150‑1 (MQ=255) cGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGCCGCATGCTGCaa > 2:1310331/1‑150 (MQ=255) aTGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAatat > 2:1837940/1‑150 (MQ=255) cGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAgg < 2:2001835/150‑1 (MQ=255) cGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAgg < 2:1167405/150‑1 (MQ=255) cGGGGCCCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAgg < 1:152499/150‑1 (MQ=255) cAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCGAGGATGCGC‑cttttct < 1:1078/60‑4 (MQ=21) cAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCGAGGATGCGC‑cttttct > 2:1078/1‑57 (MQ=21) aaCGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑AGCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTca < 2:738333/150‑1 (MQ=255) ttCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAg < 1:579999/150‑1 (MQ=255) tCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAgg < 2:659378/150‑1 (MQ=255) cGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTg > 1:1907618/1‑150 (MQ=255) cTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGAt > 1:1550209/1‑150 (MQ=255) cacGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGcc < 2:566920/150‑1 (MQ=255) gTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAg > 1:1333177/1‑150 (MQ=255) gTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAg > 2:1926152/1‑150 (MQ=255) cTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATACCAGGGACAATTCACAAGGTTGGa > 2:684951/1‑137 (MQ=255) cTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATACCAGGGACAATTCACAAGGTTGGa < 1:684951/137‑1 (MQ=255) tAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACcatc < 1:1811646/150‑1 (MQ=255) tAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACcatc > 2:2314533/1‑150 (MQ=255) aaGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACcatca > 2:954165/1‑150 (MQ=255) aagaaaGGCGC‑ATCCGAGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACcatcat > 2:2305963/4‑150 (MQ=255) gaaaGGCGC‑ATCCGAGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGtt > 1:581284/2‑129 (MQ=255) gaaaGGCGC‑ATCCGAGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGtt < 2:581284/128‑1 (MQ=255) aaaaGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCg > 2:2245531/1‑150 (MQ=255) aaaaGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCg > 1:1160420/1‑150 (MQ=255) aaaGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCgg > 2:1274352/1‑150 (MQ=255) aaGTCGC‑ATCCTCGGATGCGC‑CTTTCTTCTATCAGGATTCTACCAACGCTCCGCGGTTGTCGACGCAGTGGTACAGCAGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGc < 2:1085822/150‑1 (MQ=255) aaGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCATGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGc < 2:2107614/150‑1 (MQ=255) aaGGCGC‑ATCCGAGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGc > 2:2393912/1‑150 (MQ=255) aaGGCGC‑ATCCGAGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGc < 1:2305963/150‑1 (MQ=255) aGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGcc < 2:1333177/150‑1 (MQ=255) c‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATACCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGCCTTAtc < 1:1624815/150‑1 (MQ=255) aTCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGAtt > 2:1634500/1‑125 (MQ=255) aTCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGAtt < 1:1634500/125‑1 (MQ=255) aTCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGCCTTAtcg > 2:169179/1‑150 (MQ=255) cTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGTCGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGCCTTAtcgtcg > 2:998781/1‑150 (MQ=255) tCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGCCTTATcgtcgt > 2:66512/1‑150 (MQ=255) | GTTCCAGGTTTCAAGGCCGGCAAAGGCCTGAAAGACGCCGTCAACTAAGTCGTCTTTCAGCCGGACCCGGCCTGGCCTGGTCCGAGCACGGTGATGGCGGGGCGCAAACGTTCCCGCCTGACACGTTTGCTAAGAAAAGGCGC‑ATCCTCGGATGCGC‑CTTTCTTTTATCAGGATTCTACCCACGCTCCGCGGTTGTCGACGCAGTGGTACAGCCGTTTCTGGGGGACGCATGCTGCAAAATATCAGGGACAATTCACAAGGTTGGATTGCCAAGACCATCATCGGCCTTATCGTCGT > NC_002947/2633353‑2633649 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |