| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,788,127 | A→G | 7.9% | Q136R (CAG→CGG) | ahpF → | alkyl hydroperoxide reductase subunit F |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,788,127 | 0 | A | G | 7.9% | 209.6 / 7.0 | 76 | Q136R (CAG→CGG) | ahpF | alkyl hydroperoxide reductase subunit F |
| Reads supporting (aligned to +/- strand): ref base A (37/33); new base G (3/3); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.03e-01 | |||||||||||
CATCGTTGGTGCTGGCACTGCTGCAAGTGGGTGGCCACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGTTTGGTCAGGGCCGTATGG > NC_002947/2787980‑2788276 | caTCGTTGGTGCTGGCACTGCTGCAAGTGGGTGGCCACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAgg > 2:1582318/1‑150 (MQ=255) aTCGTTGGTGCTGGCACTGCTGCAAGTGGGTGGCCACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACATAATCTTCGCTGTCTTGCCAGAACTGCCCGGACGTCG‑TCCAGGc > 1:1114365/1‑150 (MQ=255) tGGCACTGCTGCAAGTGGGTGGCCACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGa > 1:739630/1‑150 (MQ=255) gCACTGCTGCAAGTGGGTGGCCACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATg > 2:1617005/1‑150 (MQ=255) tgctgcAAGTGGGTGGCCACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCgg > 1:65563/1‑150 (MQ=255) ctgcAAGTGGGTGGCCACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTa > 2:102311/1‑150 (MQ=255) tggCCACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCaa > 2:1877221/1‑150 (MQ=255) gtccgcccGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAAc < 2:731737/145‑1 (MQ=255) ggCCACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAAc < 2:603958/150‑1 (MQ=255) ccACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGt > 1:1303799/1‑150 (MQ=255) aCCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTgc < 2:1074338/150‑1 (MQ=255) aCCCGTCAAAGGCCAGTGCCGAAGTATTGTGGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTgc > 1:1243460/1‑150 (MQ=255) cccGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTgcg > 1:264585/1‑150 (MQ=255) ccGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGACGGTACTGATGGCTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTgcgc > 2:2433153/1‑150 (MQ=255) cGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGcc > 2:1647464/1‑150 (MQ=255) gTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCa > 1:1629456/1‑150 (MQ=255) tCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCAt < 1:473169/150‑1 (MQ=255) aaGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGtt > 2:1370472/1‑150 (MQ=255) aaGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGtt > 2:757798/1‑150 (MQ=255) aGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTg < 1:106691/150‑1 (MQ=255) aGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTg > 2:1588307/1‑150 (MQ=255) gCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCACGCTGTCGTGCCAGAACTGGCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGGACGCAAACCCAACGTGCGTCACGTTGcc > 2:731779/1‑150 (MQ=255) gAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGt < 1:1037371/150‑1 (MQ=255) gATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCt > 1:56607/1‑150 (MQ=255) aTCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTAc < 2:1597980/109‑1 (MQ=255) aTCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTAc > 1:1597980/1‑109 (MQ=255) tCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTGAAACCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGt > 1:1307982/1‑150 (MQ=255) gAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGtta > 1:1273691/1‑149 (MQ=255) gAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTc > 1:2351943/1‑150 (MQ=255) cAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTTCTCAACCCGAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAg < 1:1617005/150‑1 (MQ=255) gATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGa < 2:2295614/150‑1 (MQ=255) cccTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGa > 2:154968/1‑142 (MQ=255) cccTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGa < 1:154968/142‑1 (MQ=255) ccTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCTAGGGCGAAGTGGa > 1:2162091/1‑150 (MQ=255) ggAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCACCGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATc < 2:1054894/150‑1 (MQ=255) ggAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATc < 1:1877221/150‑1 (MQ=255) ggAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATc < 1:835917/150‑1 (MQ=255) gTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCa > 2:2430092/1‑150 (MQ=255) aaTTCAACTTCGAAACCTACTTCTCGCTGTCGTGCAAGTGCTGCCCGGACGTCG‑TTCAGCCAGTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGa < 2:1145734/150‑1 (MQ=255) aaTTCAACTTCGAAACCTACTTCTCGCTGTCATGCCAGAACTGCCC‑GCTATCGAGGTAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGa < 2:1243460/150‑1 (MQ=255) cAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATcct < 1:1402788/150‑3 (MQ=255) aaCTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATg > 1:590788/1‑150 (MQ=255) aaCTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATg > 1:2384683/1‑150 (MQ=255) tCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCgg < 2:739630/150‑1 (MQ=255) cTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAg < 1:1647464/150‑1 (MQ=255) cTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAg < 2:1114365/150‑1 (MQ=255) aCTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTa < 1:757798/150‑1 (MQ=255) ttCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCaa < 2:2116817/71‑1 (MQ=255) ttCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCaa > 1:2116817/1‑71 (MQ=255) tcGCTGTCATGCCCGAACTGCACGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTAc < 2:1307982/150‑1 (MQ=255) gCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCt < 2:373326/150‑1 (MQ=255) gCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCt > 2:1784289/1‑150 (MQ=255) ccAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTTCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGa > 2:1355427/1‑150 (MQ=255) ccAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGa < 1:1588307/150‑1 (MQ=255) ccAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGa < 1:102311/150‑1 (MQ=255) ccAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGa > 1:350642/1‑150 (MQ=255) cAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCATGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAg < 1:426163/150‑1 (MQ=255) cAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAg < 1:1582318/150‑1 (MQ=255) gtGCCTGGACGACG‑TCCGGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGtt > 2:793143/2‑150 (MQ=255) gtGCCTGGACGACG‑TCCGGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGtt > 2:1824737/2‑150 (MQ=255) tGCCTGGACGACG‑TCCGGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGttt < 1:1376254/150‑1 (MQ=255) tGCCTGGACGACG‑TCCGGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGttt < 1:793143/150‑1 (MQ=255) tGCCTGGACGACG‑TCCGGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGttt < 1:184209/150‑1 (MQ=255) tGCCCGGACGTCG‑TCCAGGCACTGAACCTTATGCCGGTACTCCACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGttt < 1:731779/150‑1 (MQ=255) tGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGGAAGATGATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGttt < 2:264585/150‑1 (MQ=255) tGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGttt < 2:2249950/150‑1 (MQ=255) gCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGTTTg < 2:56607/150‑1 (MQ=255) gCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGTTTg < 1:1784289/150‑1 (MQ=255) cctggACGACG‑TCCGGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGTTTgg > 1:457522/4‑150 (MQ=255) cccGGACGTCG‑TCCAGGCACTGACCCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGTTTgg > 1:918729/1‑150 (MQ=255) cccGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGttt < 1:2072814/148‑1 (MQ=255) cccGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGttt > 2:2072814/1‑148 (MQ=255) ccGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGTTTGGt > 2:2135060/1‑150 (MQ=255) cgtcg‑tCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGTTTGGTCAggg > 1:1098775/1‑150 (MQ=255) g‑tcCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGTTTGGTCAGGTCCGt > 1:335462/1‑150 (MQ=255) cAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGTTTGGTCAGGGCCGTATg > 1:2330026/1‑150 (MQ=255) aGGCACTGAACCTGATGGCGGTACTCAGCCCCAACGTGCGCCATGTTGGCATTGACTGTTCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGTGTATCTACCTCAACGGTGAGGTGTTTGGTCAGGGCCGTATgg < 2:65563/150‑1 (MQ=255) aGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAg < 1:1330838/78‑1 (MQ=255) aGGCACTGAACCTGATGGCGGTACGCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAg > 2:1330838/1‑78 (MQ=255) | CATCGTTGGTGCTGGCACTGCTGCAAGTGGGTGGCCACCCGTCAAAGGCCAGTGCCGAAGTGATCGAGCAGATCCAGGCCCTGGAAGGTGAATTCAACTTCGAAACCTACTTCTCGCTGTCGTGCCAGAACTGCCCGGACGTCG‑TCCAGGCACTGAACCTGATGGCGGTACTCAACCCCAACGTGCGCCATGTTGCCATCGACGGTGCGCTGTTCCAGGACGAAGTGGAATCGCGCAAGATCATGGCGGTACCGAGTATCTACCTCAACGGTGAGGTGTTTGGTCAGGGCCGTATGG > NC_002947/2787980‑2788276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |