| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,030,463 | G→C | 7.4% | intergenic (+420/‑274) | pcaY → / → mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,030,463 | 0 | G | C | 7.4% | 251.5 / 10.3 | 81 | intergenic (+420/‑274) | pcaY/mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base G (41/34); new base C (3/3); total (44/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.16e-01 | |||||||||||
GCCGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAA > NC_002947/3030316‑3030612 | gccaGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGtt > 1:15892/1‑150 (MQ=255) ggTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCg < 2:1966775/150‑1 (MQ=255) ttGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGt < 1:1528487/150‑1 (MQ=255) gCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCt > 1:1649777/1‑150 (MQ=255) ggTTGGCGGCAAGCTCTTTAACTTCGCTCCGTGCGTTTCACATCGCCAGCCTGCGTGCCTTGCGTTGAGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACTACTTGGGGGGTGCTggt < 1:1107911/150‑2 (MQ=255) ttGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGgcgc > 1:1577412/1‑150 (MQ=255) gCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTc > 1:1138207/1‑150 (MQ=255) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCAt < 1:988721/150‑1 (MQ=255) cTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCa > 1:1571064/1‑150 (MQ=255) aTGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGc > 1:1552623/1‑150 (MQ=255) tGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGc < 2:499874/129‑1 (MQ=255) tGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGc > 1:499874/1‑129 (MQ=255) cTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGc > 2:2218315/1‑150 (MQ=255) aCTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGcccc > 2:1005136/1‑150 (MQ=255) aTTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCggg < 2:93699/112‑1 (MQ=255) aTTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCggg > 1:93699/1‑112 (MQ=255) ttCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACt > 1:2193420/1‑150 (MQ=255) ttCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGCAGGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACt > 1:1946831/1‑150 (MQ=255) tCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACtt < 2:2453466/150‑1 (MQ=255) cGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTtc < 2:1649777/150‑1 (MQ=255) gTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTtct < 2:1946831/150‑1 (MQ=255) tttCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTtctc > 1:1764260/1‑150 (MQ=255) tttCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCA‑‑TGCGCCCCCGCACTtctc > 1:1621364/1‑150 (MQ=255) tttCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCCACTGGCCGCGGCGTCTGCACGGCTACCGTGACCAACACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTtctc > 1:1226243/1‑150 (MQ=255) ttCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCAGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCa < 1:1009803/150‑1 (MQ=255) tCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCGCGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCAc < 1:1260754/150‑1 (MQ=255) aTCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGaa < 2:1552623/150‑1 (MQ=255) cAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATaaaa > 2:185869/1‑150 (MQ=255) ccTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACTACTTGGGGGGTGCTggt < 2:752454/101‑2 (MQ=37) ccTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACTACTTGGGGGGTGCTggt > 1:752454/1‑100 (MQ=37) ccTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGat > 2:2388285/1‑150 (MQ=255) ccTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGat > 1:1410465/1‑150 (MQ=255) cTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCt > 1:2222358/1‑106 (MQ=255) cTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCt < 2:2222358/106‑1 (MQ=255) ttGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGt > 1:2310229/1‑150 (MQ=255) gcggccAGGCGCGGGCCT‑GCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGa < 2:300055/99‑1 (MQ=38) gcggccAGGCGCGGGCCT‑GCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGa > 1:300055/6‑104 (MQ=38) cgGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGt < 2:2310229/150‑1 (MQ=255) ccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCttt > 2:672007/1‑140 (MQ=255) ccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCttt < 1:672007/140‑1 (MQ=255) ccGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAAc > 2:317012/1‑150 (MQ=255) cgcgCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACt > 1:218111/1‑150 (MQ=255) gtgtgcgcgGCGTCGGCCCGGCTCACTAGACAACCACCTACACTCCTCAAGTAGTTGCGGGGTGCTGTCGCGTCTTCATGCACGCT‑‑TGATCCCCCGCACTTCTCACTGAATAAAAAATATTGAACGGGATCTTTGTACTCGAACTTTTCa < 2:390333/145‑1 (MQ=255) ggCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATg < 2:2193420/150‑1 (MQ=255) cgcgGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTa < 2:1410465/150‑1 (MQ=255) gcggcgTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaa < 2:1587983/150‑1 (MQ=255) ggcgTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCA‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaaaa < 2:1621364/150‑1 (MQ=255) gaatGCACGGCAACCGTGACCACCACTAGCACCCCCCAAGTAGTTGCGGGTTTCGGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGtt > 2:1271903/4‑150 (MQ=255) tGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTAACATGAAAAGTTcga < 2:15892/150‑2 (MQ=255) gCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCg > 2:1182940/1‑81 (MQ=255) gCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCg < 1:1182940/81‑1 (MQ=255) gCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcgcg < 2:1429364/150‑1 (MQ=255) ggCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGAt < 2:2411954/150‑1 (MQ=255) cTACCTTGACCACCACCAGCACACCCCAGGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAGTAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATaa < 2:179550/150‑1 (MQ=255) ccTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTa < 2:1960572/113‑1 (MQ=255) ccTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTa > 1:1960572/1‑113 (MQ=255) ccTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTa > 2:273764/1‑150 (MQ=255) cTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGAGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTAt > 1:190110/1‑150 (MQ=255) ttGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaaa < 2:641795/131‑1 (MQ=255) ttGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaaa > 1:641795/1‑131 (MQ=255) ttGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTAtt > 1:499404/1‑150 (MQ=255) gACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTc < 2:2228472/150‑1 (MQ=255) caccaccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt > 1:1203125/1‑150 (MQ=255) caccaccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTAGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt > 1:1203633/1‑150 (MQ=255) accaccaGCACGCCCCAAGTAGTAGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCtg > 2:1191613/1‑150 (MQ=255) ccacccGCCCCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGATAAAGAGAAGCTGCA‑‑TATCACGGAATACAAGATATTTAACCATCTCTTTGTACTCGAAATTTTCATGGGAAAAGTTCGCGGGATAACTATTTCCCtgt < 1:2388285/150‑1 (MQ=255) gccaGCACCCCGCAACTACTTGGGGGGTTCTGGTGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACt < 1:1209537/109‑1 (MQ=37) gccaGCACCCCGCAACTACTTGGGGGGTTCTGGTGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACt > 2:1209537/2‑110 (MQ=37) aCCCCGCAACTACTTGGGGGGTGCTGGTGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGa > 1:759803/1‑150 (MQ=255) ccccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaa > 1:2443664/1‑150 (MQ=255) ccccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaa > 2:568963/1‑150 (MQ=255) cccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaa > 2:1611665/1‑150 (MQ=255) cccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaa > 1:1848895/1‑150 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGatat < 2:1859038/76‑1 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGatat > 1:1859038/1‑76 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaaa < 1:432266/150‑1 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaaa > 1:2430890/1‑150 (MQ=255) ccccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaaa < 2:499404/150‑1 (MQ=255) cccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAg < 2:686515/150‑1 (MQ=255) cccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACCATTTCCCTGTGTTTACGAAAAg < 2:1911722/150‑1 (MQ=255) cAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGa > 1:1985687/1‑150 (MQ=255) agtagtTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTATTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAAt > 2:1305978/1‑150 (MQ=255) gtagtTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATc < 2:1985687/150‑1 (MQ=255) gtTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCCCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTTGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCaaa < 1:370123/150‑1 (MQ=255) | GCCGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGGCAGGCCCGCGCCTGGCCGCGGCGTCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCT‑‑TGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAATCAAA > NC_002947/3030316‑3030612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |