| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,048,662 | C→T | 6.0% | intergenic (+74/‑222) | PP_2661 → / → PP_2662 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,048,662 | 0 | C | T | 6.0% | 244.6 / 2.2 | 81 | intergenic (+74/‑222) | PP_2661/PP_2662 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (38/38); new base T (3/2); total (41/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
CTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCACCCCAC > NC_002947/3048520‑3048807 | ctggcctggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAggc < 2:413246/150‑1 (MQ=255) cctggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGcc < 2:1740068/150‑1 (MQ=255) ctggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCGGCTCTTCGCGGGCTCGCCCGCGAAGG‑GCTGCaaa > 1:725881/1‑142 (MQ=38) ctggcAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCGGCCCTTCGCGGGCTCGCCCGCGAAGG‑GCTGCaaa < 2:725881/143‑2 (MQ=38) agcaACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGtt > 1:1479696/1‑150 (MQ=255) aaCCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGcccccgggcat > 1:2434204/1‑143 (MQ=255) aCCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGttcatt > 2:1432633/1‑150 (MQ=255) aCCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGttcatt > 2:1682786/1‑150 (MQ=255) ccGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCGCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGttcattc < 2:1893637/150‑1 (MQ=255) cGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGttcattca > 2:1866196/1‑150 (MQ=255) tATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTAtt < 1:497304/150‑1 (MQ=255) aaTGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATAc < 1:1215340/150‑1 (MQ=255) aaTGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCCCAAGGCGGCCCCGGTTCATTCAATCGTATTGATAc < 1:2018391/150‑1 (MQ=255) aaTGCCCGCTTGCCAGCGTTCGCAGGCACGGGCGTCCTGAAGCCAGGAGATTCCGCTCAGATACTGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATAc < 2:1756825/150‑1 (MQ=255) gCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCg > 1:175273/1‑150 (MQ=255) ccGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGcc > 1:1951919/1‑150 (MQ=255) ccGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGcc < 2:2086497/150‑1 (MQ=255) ccGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCAAGATC‑AGACGGCTCTTCAAGTCTGCGCCGGTTCATTCAATCGTATTGATACCCGcc > 1:1116280/1‑150 (MQ=255) cGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCt < 1:350340/150‑1 (MQ=255) cagtGCCTGCGAACGCTGGCACTGGCTTCCTGGAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTg > 2:1349677/4‑150 (MQ=255) aGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTcc > 1:2433988/1‑150 (MQ=255) gCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGAGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGa < 1:1352270/150‑1 (MQ=255) cAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAg < 2:175273/150‑1 (MQ=255) aGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGc > 2:747437/1‑150 (MQ=255) gCACTGGCTTCCTGAAGCCATGAGATGCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCCTTCCGATCTAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCa < 1:747321/150‑1 (MQ=255) ccTGGCTTCAGGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAAt < 2:252791/111‑1 (MQ=255) ccTGGCTTCAGGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAAt > 1:252791/2‑112 (MQ=255) cTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATaa < 2:1479696/150‑1 (MQ=255) cTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATaa < 2:1755392/150‑1 (MQ=255) gCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGtc > 1:1526459/1‑150 (MQ=255) gCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGtc > 1:1352818/1‑150 (MQ=255) ccTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTCCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGa < 1:104852/150‑1 (MQ=255) cTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGaa > 2:1906034/1‑150 (MQ=255) tGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAg < 1:1301942/135‑1 (MQ=255) tGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAg > 2:1301942/1‑135 (MQ=255) gAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTAtt < 1:483108/107‑1 (MQ=255) gAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTAtt > 2:483108/1‑107 (MQ=255) aaGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCa < 2:1671866/150‑1 (MQ=255) gCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGGGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGACTGAGCCATAAGTCTCGAACCAgg > 2:1727917/1‑150 (MQ=255) cAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGAc > 2:399587/1‑150 (MQ=255) cAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGAc < 2:1352818/150‑1 (MQ=255) aGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGtt > 2:1848580/1‑87 (MQ=255) aGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGtt < 1:1848580/87‑1 (MQ=255) aTTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGc > 2:818921/1‑150 (MQ=255) tCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAg < 1:1682786/150‑1 (MQ=255) gCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTAtt < 2:1759132/91‑1 (MQ=255) gCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTAtt > 1:1759132/1‑91 (MQ=255) gCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTa > 2:2153481/1‑150 (MQ=255) gCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTa > 2:1124629/1‑150 (MQ=255) tCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTAcc < 2:1866385/150‑1 (MQ=255) cAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCg < 1:818921/150‑1 (MQ=255) aGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCgg > 1:1018065/1‑150 (MQ=255) gTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCa < 2:2316656/110‑1 (MQ=255) gTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCa > 1:2316656/1‑110 (MQ=255) gTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCaaa > 1:659632/1‑150 (MQ=255) tAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAAt < 2:1951919/150‑1 (MQ=255) aaTTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATc > 1:398488/1‑150 (MQ=255) gctgctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCt < 2:301137/82‑1 (MQ=255) gctgctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCt > 1:301137/1‑82 (MQ=255) cgccttGCGGCCCTTCGCGGGCTCGCCCGCGAAGG‑GCTGCAAAGCAGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAAc > 1:1169685/5‑111 (MQ=18) cgccttGCGGCCCTTCGCGGGCTCGCCCGCGAAGG‑GCTGCAAAGCAGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAAc < 2:1169685/107‑1 (MQ=18) ctTTGCAGCCCTTCGCGGGCGGGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGCTTCACTGTCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTa < 1:747437/150‑1 (MQ=255) ctTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTa < 1:1800278/150‑1 (MQ=255) tGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTAccc < 2:398488/150‑1 (MQ=255) ccTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATaa > 1:359534/1‑91 (MQ=255) ccTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATaa < 2:359534/91‑1 (MQ=255) cTTCGCGGGCTCGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGcc > 2:546640/1‑150 (MQ=255) cTTCGCGGGCTCGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGcc > 1:1551196/1‑150 (MQ=255) ttCGCGGGCTCGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGccc > 1:947064/1‑150 (MQ=255) ttCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGccc > 1:1765752/1‑150 (MQ=255) cgGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCaaa < 1:2153481/150‑1 (MQ=255) gCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAg < 1:1511657/94‑1 (MQ=255) gCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAg > 2:1511657/1‑94 (MQ=255) aGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCACGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTc < 2:1116280/150‑1 (MQ=255) aGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTc < 2:1526459/150‑1 (MQ=255) cccGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACGAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGc > 1:1707881/1‑150 (MQ=255) ccGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGcc > 1:84038/1‑150 (MQ=255) cgcgAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTTCCCTCCCGCCCCAAAGCACTCGCCa > 1:2441937/1‑150 (MQ=255) gcgAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGCCCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCAc < 1:1906034/150‑1 (MQ=255) gAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGACTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCAccc < 1:1727917/150‑1 (MQ=255) gg‑gCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCACCCCAc > 1:20225/1‑150 (MQ=255) | CTGGCCTGGCAGCAACCGCACCGTTATGAAATGCCCGCTTGCCAGCGTTCGCAGGCACTGGCTTCCTGAAGCCAGGAGATTCCGCTCAGATAATGTAATTGGGGCTGCTTTGCAGCCCTTCGCGGGCGAGCCCGCGAAGG‑GCCGCAAGGCGGCCCCGGTTCATTCAATCGTATTGATACCCGCCTGCCACTCCTGCCTGAGCCATAAGTCTCGAACCAGGACCCAAGCAGGTACCGGGACCAAATCACCGGGCCGTACCCTCCCGCCCCAAAGCACTCGCCACCCCAC > NC_002947/3048520‑3048807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |