| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,149,976 | T→A | 7.0% | L13M (TTG→ATG) ‡ | PP_2766 → | long‑chain‑fatty acid‑‑CoA ligase‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,149,976 | 0 | T | A | 7.0% | 332.2 / 10.2 | 111 | L13M (TTG→ATG) ‡ | PP_2766 | long‑chain‑fatty acid‑‑CoA ligase‑like protein |
| Reads supporting (aligned to +/- strand): ref base T (59/43); new base A (3/5); total (62/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 114 total aligned reads displayed.
TTCCTGCATTTCCAGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGAC > NC_002947/3149827‑3150125 | ttCCTGCATTTCCAGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCt > 1:2223088/1‑150 (MQ=255) tCCTGCATTTCCAGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCtt < 2:732600/150‑1 (MQ=255) cTGCATTTCCAGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGc > 2:172405/1‑150 (MQ=255) cTGCATTTCCAGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTAGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGc > 1:536715/1‑150 (MQ=255) gCATTTCCAGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTTAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTg > 2:1033761/1‑150 (MQ=255) aTTTCCAGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGc > 1:2343676/1‑150 (MQ=255) tCCAGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCg > 2:794655/1‑150 (MQ=255) tCCAGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCg > 2:571989/1‑150 (MQ=255) aGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCG‑‑GGCCAGCAAGCTGGccggcag < 1:1217522/150‑6 (MQ=255) gAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCCCGGGCCAGCAAGCTGGccggcag < 2:757424/150‑6 (MQ=255) agagGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACAt < 2:2166832/150‑1 (MQ=255) gTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAAc > 1:568918/1‑150 (MQ=255) gTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAAc < 1:2238986/150‑1 (MQ=255) tCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGc > 1:2002134/1‑135 (MQ=255) tCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGc < 2:2002134/135‑1 (MQ=255) gAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTg > 2:2119812/1‑150 (MQ=255) gAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGAAGCCTGAGGTGCGGGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTg > 1:167936/1‑150 (MQ=255) aGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTgg > 1:1344765/1‑150 (MQ=255) ttCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCgg > 1:714914/1‑150 (MQ=255) tCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGa < 2:568918/150‑1 (MQ=255) ctggCAAGCATGTGTGGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTGAGCGTCTTACAATAGTCGCTGACATGCATGATGCGCTCGCGAACCACCTGTC‑‑GGCCAGCTTGCGGTCCCGGGCACATCAACGTGGGGCGGa < 1:543599/148‑1 (MQ=255) gCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGAcag > 2:543599/1‑148 (MQ=255) aGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGAcgttgc < 2:1344765/150‑1 (MQ=255) aTGTGTTGCTGCTGGTGCGAGAACTGGAGCAGGAGCAATTGTCCTCCCGCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGAcgttgcgtt < 1:257540/150‑1 (MQ=255) gtgtTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCCTGACTCCCTAGCTCTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACgttgcgttgc > 1:648016/1‑150 (MQ=255) tgtTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGc > 2:2282314/1‑110 (MQ=255) tgtTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGc < 1:2282314/110‑1 (MQ=255) gtTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTgcgc < 2:276503/150‑1 (MQ=255) gtTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTgcgc > 1:1463949/1‑150 (MQ=255) gCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCca < 2:331202/149‑1 (MQ=255) gCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCca > 1:331202/1‑149 (MQ=255) ccGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCCCACAACAAATCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCcaca > 2:675041/1‑150 (MQ=255) tGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCg > 1:2117221/1‑150 (MQ=255) cgcgAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAg < 2:2295659/150‑1 (MQ=255) cgcgAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAg < 2:2326477/150‑1 (MQ=255) aCTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCtg < 1:1783638/150‑1 (MQ=255) aCTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCtg > 1:2394295/1‑150 (MQ=255) tGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAACTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCtgtg > 2:1970119/1‑150 (MQ=255) gcaggagcagCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCTGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAg < 1:2230759/150‑1 (MQ=255) caggagcagCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCATGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAgg > 2:1856043/1‑150 (MQ=255) aggagcagCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGCAGTTCCTCGGGGCCGTATCCGTCTAGTCCGGTGGCAGgc > 2:258753/1‑150 (MQ=255) gagcagCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGAcgttgcgt < 2:801946/117‑1 (MQ=255) gagcagCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGAcgttgcgt > 1:801946/1‑117 (MQ=255) gagcagCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTc < 2:715906/132‑1 (MQ=255) gagcagCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTc > 1:715906/1‑132 (MQ=255) gagcagCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGgcgc < 2:1600970/150‑1 (MQ=255) caTGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCt > 1:76037/1‑150 (MQ=255) aTGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTg > 2:322256/1‑150 (MQ=255) tGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTgg < 1:1499181/150‑1 (MQ=255) ctccctcGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAg > 1:986503/1‑135 (MQ=255) ctccctcGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGgcg > 1:2162367/1‑150 (MQ=255) tccctcGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGc < 1:1884303/132‑1 (MQ=255) tccctcGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGc > 2:1884303/1‑132 (MQ=255) tccctcGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGgcgc > 2:1825093/1‑150 (MQ=255) tcGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAAct > 2:2219040/1‑150 (MQ=255) cTGTGGCCTGAGGTGCGCGGCCATGTATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAActgct < 1:2287507/150‑1 (MQ=255) tgtgGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAActgctg < 1:1033761/150‑1 (MQ=255) tgtgGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAActgctg < 1:1272103/150‑1 (MQ=255) tgtgGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAActgctg < 2:714914/150‑1 (MQ=255) ccTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCaa > 2:1228582/1‑73 (MQ=255) ccTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCaa < 1:1228582/73‑1 (MQ=255) ccTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGa > 2:1863622/1‑150 (MQ=255) cTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAg > 1:1093933/1‑150 (MQ=255) cTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAg > 2:263283/1‑150 (MQ=255) gTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCCGTGTGCGGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCa < 1:258753/150‑1 (MQ=255) gcgGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGCGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGc > 2:1375602/1‑150 (MQ=255) gcgGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGAGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGc > 2:1375668/1‑150 (MQ=255) cgGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGcc < 2:2371089/150‑1 (MQ=255) ggCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCt < 1:20099/150‑1 (MQ=255) ccATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAGCGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCGGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTgg > 2:1468165/1‑150 (MQ=255) catgcatgAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGc > 2:367297/1‑150 (MQ=255) atgcatgAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGcc > 1:557993/1‑150 (MQ=255) atgAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCg > 1:829392/1‑150 (MQ=255) tgAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCgg < 2:2117221/150‑1 (MQ=255) gcgcTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTg > 2:1063012/1‑150 (MQ=255) cTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTgcgc < 1:694874/150‑1 (MQ=255) tCGNGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGcgcg > 2:1511840/1‑150 (MQ=255) tCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGcgcg > 2:963043/1‑150 (MQ=255) tCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGcgcg > 1:178351/1‑150 (MQ=255) cgcgAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGTGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGa < 1:1330208/150‑1 (MQ=255) cgcgAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGa < 1:172405/150‑1 (MQ=255) acaacCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCg < 2:599214/150‑1 (MQ=255) acCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAATCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCTCGACTCGTAGCCGAGGTGCAGAGCGTGGCCACCGGGCTGCGCGAGGCCGGCt < 1:1863622/150‑1 (MQ=255) cTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTc > 1:2404134/1‑150 (MQ=255) cTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTc > 1:2318601/1‑150 (MQ=255) gCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTcgc < 1:401339/150‑1 (MQ=255) cccgggCCAGCAAGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTcg > 2:143004/5‑150 (MQ=255) cc‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTcgcg < 1:963043/150‑1 (MQ=255) ccgggCCAGCAAGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTg < 1:421960/118‑1 (MQ=255) ccgggCCAGCAAGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTg > 2:421960/4‑121 (MQ=255) gCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGcggcc < 1:2033242/150‑1 (MQ=255) gCCAGCTTGCTAGCCCGGGCACATCCACGTGGGGCGGACGTTACGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGAAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCATCCcggcc > 1:326224/1‑150 (MQ=255) ccAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGcggccg > 1:452280/1‑150 (MQ=255) ccAGCAAGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGcggccg < 1:143004/150‑1 (MQ=255) cAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCt < 2:1311878/114‑1 (MQ=255) cAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCt > 1:1311878/1‑114 (MQ=255) cAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGcggccgg > 1:2033236/1‑150 (MQ=255) cTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGgcg > 2:662372/1‑73 (MQ=255) cTTGCTGGCCCGGGCACATCAACGCGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGgcg < 1:662372/73‑1 (MQ=255) ttGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGAc > 1:658962/1‑150 (MQ=255) | TTCCTGCATTTCCAGGAAGAGGTCGAGTACTTCGGCAAGCATGTGTTGCCGCTGGTGCGCGAACTGGAGCAGGAGCAGCATGCCTCCCTCGCTGTGGCCTGAGGTGCGCGGCCATGCATGAGGCGCTCGCGAACAACCTGCC‑‑GGCCAGCTTGCTGGCCCGGGCACATCAACGTGGGGCGGACGTTGCGTTGCGCCACAAGCGTCTAGGCCTGTGGCAGGCGCGCAGCTGGGCGCAACTGCTGGCCGAGGTGCAGAGCCTGGCCACCGGGCTGCGCGAGGCCGGCTTCGCGGCCGGCGAC > NC_002947/3149827‑3150125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |